BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00035466
         (747 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5...   318   e-102
gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagu...   315   e-102
ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5...   315   e-101
ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III s...   278   9e-86
ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III s...   278   1e-85
ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III s...   270   6e-83
ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III s...   262   1e-79
ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III s...   262   1e-79
ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III s...   262   2e-79
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   236   1e-70
ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III s...   236   7e-70
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   236   1e-69
gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Mac...   235   1e-69
ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III s...   236   1e-69
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   236   2e-69
gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium c...   234   3e-69
ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5...   234   3e-69
gb|PNT26791.1| hypothetical protein POPTR_007G028600v3 [Populus ...   233   5e-69
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   233   6e-69
ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5...   233   1e-68

>ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Asparagus
           officinalis]
          Length = 589

 Score =  318 bits (816), Expect = e-102
 Identities = 163/247 (65%), Positives = 195/247 (78%)
 Frame = -3

Query: 742 IERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAALRLQKQTLSSSSTPSIFNFAVGIRM 563
           +ERCEEVRVKPKQ++VEVDL LD D QNYD E   L L+  TLSSS    +  FAVGIR 
Sbjct: 83  LERCEEVRVKPKQAKVEVDLKLDTDRQNYDPEKPVLNLENLTLSSSRGLCVPYFAVGIRN 142

Query: 562 GNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKPSEGKVVPGDSSESIDDAE 383
           GNQLHL+PVD+VVQLRPS   +N+G +KR+QAA S DAN  P +G  V GDSSE++DDA+
Sbjct: 143 GNQLHLSPVDSVVQLRPS---INVGEEKRKQAAPSIDANTNPLQGNAVSGDSSENLDDAD 199

Query: 382 PWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSRR 203
           PWV L  HS +S   D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +GPS+R
Sbjct: 200 PWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGALGPSKR 259

Query: 202 VLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSSL 23
            LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV+KSSL
Sbjct: 260 DLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWVAKSSL 319

Query: 22  RCDGVPA 2
              GV A
Sbjct: 320 VYIGVEA 326


>gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagus officinalis]
          Length = 521

 Score =  315 bits (806), Expect = e-102
 Identities = 163/248 (65%), Positives = 195/248 (78%), Gaps = 1/248 (0%)
 Frame = -3

Query: 742 IERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAALRLQKQTLSSSSTPSIFNFAVGIRM 563
           +ERCEEVRVKPKQ++VEVDL LD D QNYD E   L L+  TLSSS    +  FAVGIR 
Sbjct: 14  LERCEEVRVKPKQAKVEVDLKLDTDRQNYDPEKPVLNLENLTLSSSRGLCVPYFAVGIRN 73

Query: 562 GNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKP-SEGKVVPGDSSESIDDA 386
           GNQLHL+PVD+VVQLRPS   +N+G +KR+QAA S DAN  P  +G  V GDSSE++DDA
Sbjct: 74  GNQLHLSPVDSVVQLRPS---INVGEEKRKQAAPSIDANTNPLQQGNAVSGDSSENLDDA 130

Query: 385 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 206
           +PWV L  HS +S   D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +GPS+
Sbjct: 131 DPWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGALGPSK 190

Query: 205 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 26
           R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV+KSS
Sbjct: 191 RDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWVAKSS 250

Query: 25  LRCDGVPA 2
           L   GV A
Sbjct: 251 LVYIGVEA 258


>ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Asparagus
           officinalis]
          Length = 590

 Score =  315 bits (806), Expect = e-101
 Identities = 163/248 (65%), Positives = 195/248 (78%), Gaps = 1/248 (0%)
 Frame = -3

Query: 742 IERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAALRLQKQTLSSSSTPSIFNFAVGIRM 563
           +ERCEEVRVKPKQ++VEVDL LD D QNYD E   L L+  TLSSS    +  FAVGIR 
Sbjct: 83  LERCEEVRVKPKQAKVEVDLKLDTDRQNYDPEKPVLNLENLTLSSSRGLCVPYFAVGIRN 142

Query: 562 GNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKP-SEGKVVPGDSSESIDDA 386
           GNQLHL+PVD+VVQLRPS   +N+G +KR+QAA S DAN  P  +G  V GDSSE++DDA
Sbjct: 143 GNQLHLSPVDSVVQLRPS---INVGEEKRKQAAPSIDANTNPLQQGNAVSGDSSENLDDA 199

Query: 385 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 206
           +PWV L  HS +S   D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +GPS+
Sbjct: 200 DPWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGALGPSK 259

Query: 205 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 26
           R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV+KSS
Sbjct: 260 RDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWVAKSS 319

Query: 25  LRCDGVPA 2
           L   GV A
Sbjct: 320 LVYIGVEA 327


>ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Phoenix dactylifera]
          Length = 701

 Score =  278 bits (711), Expect = 9e-86
 Identities = 150/261 (57%), Positives = 189/261 (72%), Gaps = 13/261 (4%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEV-AALRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPKQS++EVDLSLDV+S+NYD++V   +R++KQTLSSS      ++AVGI
Sbjct: 157 LDERCEEVRVKPKQSKIEVDLSLDVNSENYDRDVDEPMRIEKQTLSSSKASFATSYAVGI 216

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN----------PKPS--EGK 425
             GNQLHLNPV AVVQLRPS   ++ G   R+ +A     +          PKPS  +GK
Sbjct: 217 LRGNQLHLNPVHAVVQLRPSMSHIDAGLQGRKHSAKGVQGSAKSTDEIPEPPKPSVRQGK 276

Query: 424 VVPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPG 245
            V  DS+E+I+D EPW+ L YH  +S F + Y +KM + ++N IQF ++  DY + LCPG
Sbjct: 277 KVSEDSNENINDYEPWISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCPG 336

Query: 244 TSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQH 65
           TS++KK   GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ H
Sbjct: 337 TSTDKKRTKGPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLH 396

Query: 64  ADLVQGLWVSKSSLRCDGVPA 2
           A LVQGLWV+KSSL  +G  A
Sbjct: 397 AYLVQGLWVTKSSLLYEGFNA 417


>ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Phoenix dactylifera]
 ref|XP_008777119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Phoenix dactylifera]
          Length = 702

 Score =  278 bits (710), Expect = 1e-85
 Identities = 150/262 (57%), Positives = 189/262 (72%), Gaps = 14/262 (5%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEV-AALRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPKQS++EVDLSLDV+S+NYD++V   +R++KQTLSSS      ++AVGI
Sbjct: 157 LDERCEEVRVKPKQSKIEVDLSLDVNSENYDRDVDEPMRIEKQTLSSSKASFATSYAVGI 216

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN----------PKPS---EG 428
             GNQLHLNPV AVVQLRPS   ++ G   R+ +A     +          PKPS   +G
Sbjct: 217 LRGNQLHLNPVHAVVQLRPSMSHIDAGLQGRKHSAKGVQGSAKSTDEIPEPPKPSVRQQG 276

Query: 427 KVVPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP 248
           K V  DS+E+I+D EPW+ L YH  +S F + Y +KM + ++N IQF ++  DY + LCP
Sbjct: 277 KKVSEDSNENINDYEPWISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCP 336

Query: 247 GTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQ 68
           GTS++KK   GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ 
Sbjct: 337 GTSTDKKRTKGPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQL 396

Query: 67  HADLVQGLWVSKSSLRCDGVPA 2
           HA LVQGLWV+KSSL  +G  A
Sbjct: 397 HAYLVQGLWVTKSSLLYEGFNA 418


>ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa
           acuminata subsp. malaccensis]
          Length = 672

 Score =  270 bits (690), Expect = 6e-83
 Identities = 142/248 (57%), Positives = 179/248 (72%), Gaps = 3/248 (1%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPK+S++EVD S+D +S+NYDQ+ A  LRLQKQTLSSS  P + ++AVGI
Sbjct: 144 LNERCEEVRVKPKESKIEVDFSIDANSENYDQDAAEPLRLQKQTLSSSIAPLVTSYAVGI 203

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKP--SEGKVVPGDSSESI 395
             G+QLHLNP+ AVVQLRPS   L+ G  K++  A S + +     S GK+    S E I
Sbjct: 204 LRGDQLHLNPIHAVVQLRPSMAHLDTGLQKKKHNAQSAELSTSNDNSMGKLASVGSDEKI 263

Query: 394 DDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVG 215
           +D EPW+ L YH+ +S FT+ Y +KMV+   N I F +K  DY S LCPG SS+ K   G
Sbjct: 264 EDDEPWISLEYHAVDSHFTERYHRKMVAEAKNQIPFMMKPSDYVSSLCPGASSDNKRTKG 323

Query: 214 PSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVS 35
           PSRR+LL++PLEERLKKWLSEG Q+NRF +L+HLAP+ S EDVL  L  +A LVQGLWVS
Sbjct: 324 PSRRLLLTLPLEERLKKWLSEGCQINRFDALMHLAPDSSKEDVLNALPLYAVLVQGLWVS 383

Query: 34  KSSLRCDG 11
           KS+L  +G
Sbjct: 384 KSTLLYEG 391


>ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Elaeis guineensis]
          Length = 701

 Score =  262 bits (670), Expect = 1e-79
 Identities = 146/261 (55%), Positives = 185/261 (70%), Gaps = 13/261 (4%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEV-AALRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPKQS++EVDLSLDVDS+NYD++V   LR++KQ LSSS      ++AVG+
Sbjct: 158 LNERCEEVRVKPKQSKIEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGL 217

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALS-QDAN---------PKPS--EGK 425
             GNQLHLNPV AVVQLRPS   ++ G  +R+ +A   QD+          PKPS  +GK
Sbjct: 218 LRGNQLHLNPVHAVVQLRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQGK 277

Query: 424 VVPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPG 245
            V  DS+E+ID  EPW+ L YH  +  F + Y +KM + + N +QF +K  DY + LCPG
Sbjct: 278 KVSEDSNENIDH-EPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPG 336

Query: 244 TSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQH 65
           TS++KK   GP RRVLLSMPLEERL KWL+E  QVN F +L++LAP +S +DVLK+LQ H
Sbjct: 337 TSADKKRTRGPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLH 396

Query: 64  ADLVQGLWVSKSSLRCDGVPA 2
           A LVQGLWV+KSSL  +G  A
Sbjct: 397 AYLVQGLWVTKSSLLYEGFNA 417


>ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
           [Elaeis guineensis]
          Length = 695

 Score =  262 bits (669), Expect = 1e-79
 Identities = 146/262 (55%), Positives = 185/262 (70%), Gaps = 14/262 (5%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEV-AALRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPKQS++EVDLSLDVDS+NYD++V   LR++KQ LSSS      ++AVG+
Sbjct: 151 LNERCEEVRVKPKQSKIEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGL 210

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALS-QDAN---------PKPS---EG 428
             GNQLHLNPV AVVQLRPS   ++ G  +R+ +A   QD+          PKPS   +G
Sbjct: 211 LRGNQLHLNPVHAVVQLRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQQG 270

Query: 427 KVVPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP 248
           K V  DS+E+ID  EPW+ L YH  +  F + Y +KM + + N +QF +K  DY + LCP
Sbjct: 271 KKVSEDSNENIDH-EPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCP 329

Query: 247 GTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQ 68
           GTS++KK   GP RRVLLSMPLEERL KWL+E  QVN F +L++LAP +S +DVLK+LQ 
Sbjct: 330 GTSADKKRTRGPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQL 389

Query: 67  HADLVQGLWVSKSSLRCDGVPA 2
           HA LVQGLWV+KSSL  +G  A
Sbjct: 390 HAYLVQGLWVTKSSLLYEGFNA 411


>ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Elaeis guineensis]
          Length = 702

 Score =  262 bits (669), Expect = 2e-79
 Identities = 146/262 (55%), Positives = 185/262 (70%), Gaps = 14/262 (5%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEV-AALRLQKQTLSSSSTPSIFNFAVGI 569
           L ERCEEVRVKPKQS++EVDLSLDVDS+NYD++V   LR++KQ LSSS      ++AVG+
Sbjct: 158 LNERCEEVRVKPKQSKIEVDLSLDVDSENYDRDVDEPLRIEKQILSSSKASFATSYAVGL 217

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALS-QDAN---------PKPS---EG 428
             GNQLHLNPV AVVQLRPS   ++ G  +R+ +A   QD+          PKPS   +G
Sbjct: 218 LRGNQLHLNPVHAVVQLRPSMDHIDAGLQRRKHSAKGVQDSAKSTDEISEPPKPSIRQQG 277

Query: 427 KVVPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP 248
           K V  DS+E+ID  EPW+ L YH  +  F + Y +KM + + N +QF +K  DY + LCP
Sbjct: 278 KKVSEDSNENIDH-EPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCP 336

Query: 247 GTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQ 68
           GTS++KK   GP RRVLLSMPLEERL KWL+E  QVN F +L++LAP +S +DVLK+LQ 
Sbjct: 337 GTSADKKRTRGPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQL 396

Query: 67  HADLVQGLWVSKSSLRCDGVPA 2
           HA LVQGLWV+KSSL  +G  A
Sbjct: 397 HAYLVQGLWVTKSSLLYEGFNA 418


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
           [Theobroma cacao]
          Length = 588

 Score =  236 bits (602), Expect = 1e-70
 Identities = 134/258 (51%), Positives = 173/258 (67%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+DL++DVDS NYD E A+ L++ KQTLSSS   P    +AVG
Sbjct: 58  LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 117

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKV----- 422
           + MG++LHLNP+ AVVQLRPS   L     KR+ AA + DA       +P++GK      
Sbjct: 118 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAA-DAEVTVKVEEPNDGKAAGSST 176

Query: 421 -----VPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                +   + +  DD E WVPL YHS ++ F+  Y ++M++ +   IQF +  YDY   
Sbjct: 177 KQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDS 236

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR+LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 237 LCPGASNNNKAQ-GPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 295

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 296 LQKHALLVQGLWVPKSSL 313


>ref|XP_017969869.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Theobroma cacao]
          Length = 702

 Score =  236 bits (603), Expect = 7e-70
 Identities = 134/258 (51%), Positives = 173/258 (67%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+DL++DVDS NYD E A+ L++ KQTLSSS   P    +AVG
Sbjct: 157 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 216

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKV----- 422
           + MG++LHLNP+ AVVQLRPS   L     KR+ AA + DA       +P++GK      
Sbjct: 217 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAA-DAEVTVKVEEPNDGKAAGSST 275

Query: 421 -----VPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                +   + +  DD E WVPL YHS ++ F+  Y ++M++ +   IQF +  YDY   
Sbjct: 276 KQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCPIQFTMSPYDYVDS 335

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR+LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 336 LCPGASNNNKAQ-GPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 394

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 395 LQKHALLVQGLWVPKSSL 412


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  236 bits (602), Expect = 1e-69
 Identities = 134/258 (51%), Positives = 173/258 (67%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+DL++DVDS NYD E A+ L++ KQTLSSS   P    +AVG
Sbjct: 155 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 214

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKV----- 422
           + MG++LHLNP+ AVVQLRPS   L     KR+ AA + DA       +P++GK      
Sbjct: 215 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAA-DAEVTVKVEEPNDGKAAGSST 273

Query: 421 -----VPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                +   + +  DD E WVPL YHS ++ F+  Y ++M++ +   IQF +  YDY   
Sbjct: 274 KQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDS 333

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR+LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 334 LCPGASNNNKAQ-GPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 392

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 393 LQKHALLVQGLWVPKSSL 410


>gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Macleaya cordata]
          Length = 646

 Score =  235 bits (599), Expect = 1e-69
 Identities = 131/242 (54%), Positives = 161/242 (66%), Gaps = 1/242 (0%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSSSTPSIFNFAVGI 569
           L ++C+EVRVKP   QVEVDLSLDV++ NYD  VA  +R+ KQTLSS   P    +AVG+
Sbjct: 124 LDQKCQEVRVKPNNMQVEVDLSLDVEN-NYDASVADNMRITKQTLSSRKVPLTTGYAVGV 182

Query: 568 RMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKPSEGKVVPGDSSESIDD 389
            +GN+LHLNPV+AVVQLRPS   L  GG K          N + S    V   SS++   
Sbjct: 183 LVGNKLHLNPVNAVVQLRPSMEHLKPGGKKNNVTQ-----NVEKSGQTTVEAGSSKT--- 234

Query: 388 AEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPS 209
            + WV L YH  +S F+  Y++KM + +   IQF++  YDY + LCPG+S+      GPS
Sbjct: 235 -QSWVSLEYHGTDSIFSSRYRQKMTAQESTQIQFSMNPYDYVNSLCPGSSTEDNRTKGPS 293

Query: 208 RRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKS 29
           RR  LS+PLEER K WLSEGP VNRF +L HLAP+DS E VL VLQ HADLVQGLWVSKS
Sbjct: 294 RRFFLSLPLEERFKTWLSEGPHVNRFNALKHLAPDDSNEIVLGVLQHHADLVQGLWVSKS 353

Query: 28  SL 23
           SL
Sbjct: 354 SL 355


>ref|XP_017969867.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Theobroma cacao]
          Length = 738

 Score =  236 bits (603), Expect = 1e-69
 Identities = 134/258 (51%), Positives = 173/258 (67%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+DL++DVDS NYD E A+ L++ KQTLSSS   P    +AVG
Sbjct: 157 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 216

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKV----- 422
           + MG++LHLNP+ AVVQLRPS   L     KR+ AA + DA       +P++GK      
Sbjct: 217 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAA-DAEVTVKVEEPNDGKAAGSST 275

Query: 421 -----VPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                +   + +  DD E WVPL YHS ++ F+  Y ++M++ +   IQF +  YDY   
Sbjct: 276 KQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCPIQFTMSPYDYVDS 335

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR+LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 336 LCPGASNNNKAQ-GPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 394

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 395 LQKHALLVQGLWVPKSSL 412


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
           [Theobroma cacao]
          Length = 736

 Score =  236 bits (602), Expect = 2e-69
 Identities = 134/258 (51%), Positives = 173/258 (67%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+DL++DVDS NYD E A+ L++ KQTLSSS   P    +AVG
Sbjct: 155 LDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVG 214

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKV----- 422
           + MG++LHLNP+ AVVQLRPS   L     KR+ AA + DA       +P++GK      
Sbjct: 215 VLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAA-DAEVTVKVEEPNDGKAAGSST 273

Query: 421 -----VPGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                +   + +  DD E WVPL YHS ++ F+  Y ++M++ +   IQF +  YDY   
Sbjct: 274 KQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDS 333

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR+LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 334 LCPGASNNNKAQ-GPSRRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 392

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 393 LQKHALLVQGLWVPKSSL 410


>gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium catenatum]
          Length = 657

 Score =  234 bits (596), Expect = 3e-69
 Identities = 134/262 (51%), Positives = 171/262 (65%), Gaps = 16/262 (6%)
 Frame = -3

Query: 739 ERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSSSTPSIFNFAVGIRM 563
           ERC +VR+KPK +Q E+  SLD+DS+NY++EV   L++  QTLSSSS PS+ ++AVG   
Sbjct: 136 ERCAKVRIKPKLAQFEIQYSLDIDSENYNEEVDHNLKITTQTLSSSSKPSVNDYAVGFLR 195

Query: 562 GNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKP------------SEGKVV 419
           GN LH+ P+ AVVQ RPS   LN G  K  Q     ++N KP            ++GK V
Sbjct: 196 GNSLHVIPLHAVVQFRPSIAHLN-GVQKVNQGGHQPESNLKPVDNFMESPKLSNNKGKAV 254

Query: 418 PGDSSES---IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP 248
             D+ E+   I+  EPWV L YHS +S  +  Y+++ + G  N I  A+K  DY      
Sbjct: 255 KDDAKEANEHINVDEPWVLLEYHSSDSPVSCIYREQTLKGGRNYIPLAMKSSDYLDSCGS 314

Query: 247 GTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQ 68
            TS   +   GPS+R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ 
Sbjct: 315 ATSGFTRKTTGPSKRYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQH 374

Query: 67  HADLVQGLWVSKSSLRCDGVPA 2
           HA LVQGLWVSKSSL  DG+ A
Sbjct: 375 HAYLVQGLWVSKSSLLHDGLSA 396


>ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5 [Dendrobium catenatum]
          Length = 657

 Score =  234 bits (596), Expect = 3e-69
 Identities = 134/262 (51%), Positives = 171/262 (65%), Gaps = 16/262 (6%)
 Frame = -3

Query: 739 ERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSSSTPSIFNFAVGIRM 563
           ERC +VR+KPK +Q E+  SLD+DS+NY++EV   L++  QTLSSSS PS+ ++AVG   
Sbjct: 136 ERCAKVRIKPKLAQFEIQYSLDIDSENYNEEVDHNLKITTQTLSSSSKPSVNDYAVGFLR 195

Query: 562 GNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDANPKP------------SEGKVV 419
           GN LH+ P+ AVVQ RPS   LN G  K  Q     ++N KP            ++GK V
Sbjct: 196 GNSLHVIPLHAVVQFRPSIAHLN-GVQKVNQGGHQPESNLKPVDNFMESPKLPNNKGKAV 254

Query: 418 PGDSSES---IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP 248
             D+ E+   I+  EPWV L YHS +S  +  Y+++ + G  N I  A+K  DY      
Sbjct: 255 KDDAKEANEHINVDEPWVLLEYHSSDSPVSCIYREQTLKGGRNYIPLAMKSSDYLDSCGS 314

Query: 247 GTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQ 68
            TS   +   GPS+R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ 
Sbjct: 315 ATSGFTRKTTGPSKRYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQH 374

Query: 67  HADLVQGLWVSKSSLRCDGVPA 2
           HA LVQGLWVSKSSL  DG+ A
Sbjct: 375 HAYLVQGLWVSKSSLLHDGLSA 396


>gb|PNT26791.1| hypothetical protein POPTR_007G028600v3 [Populus trichocarpa]
          Length = 664

 Score =  233 bits (595), Expect = 5e-69
 Identities = 129/250 (51%), Positives = 175/250 (70%), Gaps = 9/250 (3%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERC+EVRVKP+ ++VEVDLS+D D++NYD ++A+ L ++KQTLSSS S P    +AVG
Sbjct: 145 LDERCKEVRVKPESTEVEVDLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVG 203

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALS-QDANP-KP-----SEGKVVPG 413
           + +GN+LHLNP+ AVVQLRPS   L+ G  K ++ A S +D+N  KP      + K +  
Sbjct: 204 VLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATSGEDSNEGKPLGLPKKQSKQMSS 263

Query: 412 DSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSN 233
            + +  D  E W+PL YH  +S  +  Y + MV+ + + I+FA+  YDY S LCPG S+N
Sbjct: 264 GNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNN 323

Query: 232 KKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLV 53
                GPSRRVLLS+PLEER+K+   EGP ++RFA+L HL PNDSIED+L VLQ++  LV
Sbjct: 324 NIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLV 383

Query: 52  QGLWVSKSSL 23
           QGLWV K+SL
Sbjct: 384 QGLWVPKTSL 393


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  233 bits (595), Expect = 6e-69
 Identities = 129/250 (51%), Positives = 175/250 (70%), Gaps = 9/250 (3%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERC+EVRVKP+ ++VEVDLS+D D++NYD ++A+ L ++KQTLSSS S P    +AVG
Sbjct: 145 LDERCKEVRVKPESTEVEVDLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVG 203

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALS-QDANP-KP-----SEGKVVPG 413
           + +GN+LHLNP+ AVVQLRPS   L+ G  K ++ A S +D+N  KP      + K +  
Sbjct: 204 VLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATSGEDSNEGKPLGLPKKQSKQMSS 263

Query: 412 DSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSN 233
            + +  D  E W+PL YH  +S  +  Y + MV+ + + I+FA+  YDY S LCPG S+N
Sbjct: 264 GNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNN 323

Query: 232 KKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLV 53
                GPSRRVLLS+PLEER+K+   EGP ++RFA+L HL PNDSIED+L VLQ++  LV
Sbjct: 324 NIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLV 383

Query: 52  QGLWVSKSSL 23
           QGLWV K+SL
Sbjct: 384 QGLWVPKTSL 393


>ref|XP_022775288.1| DNA-directed RNA polymerase III subunit RPC5 [Durio zibethinus]
          Length = 697

 Score =  233 bits (595), Expect = 1e-68
 Identities = 133/258 (51%), Positives = 171/258 (66%), Gaps = 17/258 (6%)
 Frame = -3

Query: 745 LIERCEEVRVKPKQSQVEVDLSLDVDSQNYDQEVAA-LRLQKQTLSSS-STPSIFNFAVG 572
           L ERCEEVRVKP   +VE+++S+DVDS NYD E A+ L++ KQTLSSS   P    FAVG
Sbjct: 152 LDERCEEVRVKPSSGEVEIEMSVDVDSNNYDSECASKLKITKQTLSSSWLPPRATGFAVG 211

Query: 571 IRMGNQLHLNPVDAVVQLRPSKICLNIGGDKRQQAALSQDAN-----PKPSEGKVV---- 419
           +  G++LHLNP+ AVVQLRPS   L     KR+ + ++ DA       +P++GK V    
Sbjct: 212 VLTGDKLHLNPIHAVVQLRPSLEHLKPSVSKRK-STVATDAEVTVKVEEPNDGKAVGPST 270

Query: 418 ------PGDSSESIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASI 257
                    + +  DD E WVPL YHS +S F+  Y ++M++ +   IQF +  YDY   
Sbjct: 271 KQNKRIQSSTEQKADDKECWVPLKYHSSKSDFSAQYLQRMMTEESCPIQFTMSPYDYVDS 330

Query: 256 LCPGTSSNKKGDVGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKV 77
           LCPG S+N K   GPSRR LLS+PLEERLKK LSEGP  +RF++L H AP+ SIED+ +V
Sbjct: 331 LCPGASNNNKTQ-GPSRRFLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEV 389

Query: 76  LQQHADLVQGLWVSKSSL 23
           LQ+HA LVQGLWV KSSL
Sbjct: 390 LQKHALLVQGLWVPKSSL 407