BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00035389
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13295.1| retrovirus-related pol polyprotein, partial [Phas...    52   1e-08
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    51   2e-08
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    50   4e-08
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus...    49   2e-07
ref|XP_017196424.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    58   8e-07
gb|OMO97119.1| Integrase, catalytic core [Corchorus capsularis]        44   8e-07
gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposo...    57   9e-07
gb|PON33276.1| Zinc finger, CCHC-type [Parasponia andersonii]          54   9e-07
gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposo...    57   1e-06
gb|OAE22245.1| hypothetical protein AXG93_412s1350 [Marchantia p...    45   2e-06
ref|XP_008272082.2| PREDICTED: ribonuclease H2 subunit B isoform...    56   3e-06
ref|XP_017203103.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    56   3e-06
ref|YP_009109699.1| p10 protein [Baboon endogenous virus strain M7]    52   3e-06
ref|XP_008249573.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   5e-06
ref|XP_007516022.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   7e-06
ref|XP_008266975.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   1e-05
ref|XP_017203830.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   1e-05

>gb|AAR13295.1| retrovirus-related pol polyprotein, partial [Phaseolus vulgaris]
          Length = 324

 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKV-QEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKG 180
           ++ELR++DK+ ++    E  ++ R G    Q  +K+   M +S+   + KD+C  C +KG
Sbjct: 161 SHELRKQDKMKTKSTTSEEALVTRGGQ---QSQTKERRGMCKSKGRVVAKDECAFCHEKG 217

Query: 181 HWIKNCPEWIKGKEKPSKSSEA 246
           HW K+CP+  K ++ P  ++ A
Sbjct: 218 HWKKDCPKLQKKEKVPQDANVA 239



 Score = 35.0 bits (79), Expect(2) = 1e-08
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 333 ERLIDTGTTYHICSRRKSFSSPEE-DHGMVYMGN 431
           E ++D+G TYH+C  R  F   +E D G+VYMGN
Sbjct: 263 EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 296


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 50.8 bits (120), Expect(2) = 2e-08
 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKV-QEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKG 180
           ++ELR++DK+ ++    E  ++AR      Q  +K+   M +S+   + KD+C  C +KG
Sbjct: 122 SHELRKQDKMKTKSTTSEEALVARGRQ---QSQTKERRGMSKSKGRAVAKDECAFCHEKG 178

Query: 181 HWIKNCPEWIKGKEK 225
           HW K+CP+ ++ KEK
Sbjct: 179 HWKKDCPK-LQKKEK 192



 Score = 35.0 bits (79), Expect(2) = 2e-08
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 333 ERLIDTGTTYHICSRRKSFSSPEE-DHGMVYMGN 431
           E ++D+G TYH+C  R  F   +E D G+VYMGN
Sbjct: 224 EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 257


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 50.1 bits (118), Expect(2) = 4e-08
 Identities = 24/81 (29%), Positives = 45/81 (55%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGH 183
           ++ELR++DK+ ++       +   G    Q  +K+   M +S+   + KD+C  C +KGH
Sbjct: 121 SHELRKQDKMRTKSTTSEEALVIRGRQ--QSQTKERRGMSKSKGRVVAKDECAFCHEKGH 178

Query: 184 WIKNCPEWIKGKEKPSKSSEA 246
           W K+CP+  K ++ P  ++ A
Sbjct: 179 WKKDCPKLQKKEKVPQDANVA 199



 Score = 35.0 bits (79), Expect(2) = 4e-08
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 333 ERLIDTGTTYHICSRRKSFSSPEE-DHGMVYMGN 431
           E ++D+G TYH+C  R  F   +E D G+VYMGN
Sbjct: 223 EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 256


>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
          Length = 631

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 26/77 (33%), Positives = 40/77 (51%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGH 183
           NY+LRRKDK +S        ++  G     +   +     RS   +L K+QC  CK++ H
Sbjct: 161 NYDLRRKDKETSRASTSGETLSTRGRNPYPKGGNRGRSKSRSHH-QLAKNQCAFCKEQEH 219

Query: 184 WIKNCPEWIKGKEKPSK 234
           W ++CP+ +K KE   K
Sbjct: 220 WKRDCPK-LKEKENCKK 235



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +3

Query: 339 LIDTGTTYHICSRRKSFSSPEE-DHGMVYMGN 431
           ++D+G TYH+  RR  F+S E+ D G+V MGN
Sbjct: 273 MLDSGATYHVTPRRDWFASFEKVDGGVVVMGN 304


>ref|XP_017196424.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC108176401 [Oryctolagus cuniculus]
          Length = 1159

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 24/72 (33%), Positives = 44/72 (61%)
 Frame = +1

Query: 19  RKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGHWIKNC 198
           ++DK  ++ + + +    AG+   Q+  K+  + G   RPR+E+DQC  CK++GHW ++C
Sbjct: 254 QRDKKRNKDLVKVLATVVAGSKTRQDKGKQDRDQGDKWRPRVERDQCAYCKERGHWARDC 313

Query: 199 PEWIKGKEKPSK 234
           P   KG+ +P +
Sbjct: 314 PN--KGRPRPQQ 323


>gb|OMO97119.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1031

 Score = 43.5 bits (101), Expect(2) = 8e-07
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +1

Query: 10  ELRRKDKVSSE----KVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKK 177
           E   KDK ++E    K Q H++ A+ GN + +  S K +  G  +  + +K  C  C KK
Sbjct: 162 EKMSKDKDAAESSKNKSQVHMVGAKFGNKSDKSKSLKVNNKGFKKNSKSDKT-CFHCGKK 220

Query: 178 GHWIKNCPEWIKGKEKPSKSS 240
           GH+IK C  + K ++K S SS
Sbjct: 221 GHFIKEC-RYKKREDKKSGSS 240



 Score = 37.0 bits (84), Expect(2) = 8e-07
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 342 IDTGTTYHICSRRKSFSSPEEDHGMVYMGN 431
           ID+G T HIC+ +  FSS  ED   V+MGN
Sbjct: 273 IDSGATIHICNNKDLFSSYVEDESEVFMGN 302


>gb|KYP39598.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 350

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGH 183
           +YELRRKDK  S +     ++AR G P +Q   KK     ++   ++ KD+C  C++KGH
Sbjct: 173 SYELRRKDKKDSSEKANEALVAR-GRPVIQAKGKKKRSKSKA---KVGKDECAFCREKGH 228

Query: 184 WIKNCPE 204
           W K+CP+
Sbjct: 229 WKKDCPK 235


>gb|PON33276.1| Zinc finger, CCHC-type [Parasponia andersonii]
          Length = 99

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSE-RPRLEKDQCMKCKKKG 180
           NYE+R+KD+  +  V    ++AR      +  S+K  + GRS  + R +KD+C  C +KG
Sbjct: 36  NYEIRKKDQKENRDVPAEALIARR-----RSQSRKKEKKGRSRSKGRPDKDECAFCHEKG 90

Query: 181 HWIKNCPE 204
           HW K+CP+
Sbjct: 91  HWKKDCPK 98


>gb|KYP67484.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 561

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +1

Query: 4   NYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGH 183
           +YELRRKDK  S +     ++AR G P +Q   KK     ++   ++ KD+C  C++KGH
Sbjct: 161 SYELRRKDKKDSSEKANEALVAR-GRPVIQAKGKKKRSKSKA---KVGKDECAFCREKGH 216

Query: 184 WIKNCPE 204
           W K+CP+
Sbjct: 217 WKKDCPK 223


>gb|OAE22245.1| hypothetical protein AXG93_412s1350 [Marchantia polymorpha subsp.
           ruderalis]
          Length = 655

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +1

Query: 13  LRRKDKVSSEKVQEHV--MMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGHW 186
           +R K K +S   + H   +MA  G+ N + N K+           L KD C  CK+KGHW
Sbjct: 1   MRPKGKGTSTSTEYHASELMANKGSKNKKNNKKQF------SGSNLHKDVCAWCKEKGHW 54

Query: 187 IKNCPEWIKGKEKPSKSS 240
            ++CP+  +G++  ++S+
Sbjct: 55  KRDCPK--RGQQGQNRSA 70



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +3

Query: 339 LIDTGTTYHICSRRKSFSSPEEDH-GMVYMGN 431
           ++D+G +YHICS RK FSS  + + G V+M N
Sbjct: 98  VLDSGASYHICSNRKLFSSYCQTYGGSVHMAN 129


>ref|XP_008272082.2| PREDICTED: ribonuclease H2 subunit B isoform X1 [Oryctolagus
           cuniculus]
          Length = 748

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/78 (29%), Positives = 46/78 (58%)
 Frame = +1

Query: 1   VNYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKG 180
           V  E  ++D+   +++ + +    AG+   ++  ++  + G   RPR+E+DQC  CK++G
Sbjct: 661 VRREQDQRDRKRDKQLVKVLATIVAGSKTGRDKGRQDRDQGEKRRPRVERDQCAYCKERG 720

Query: 181 HWIKNCPEWIKGKEKPSK 234
           HW ++CP   KG+ +P +
Sbjct: 721 HWARDCPN--KGRPRPQQ 736


>ref|XP_017203103.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103351068 [Oryctolagus cuniculus]
          Length = 1214

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/78 (29%), Positives = 47/78 (60%)
 Frame = +1

Query: 1   VNYELRRKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKG 180
           V+ E   +D+   +++ + + +  AG+   ++   +  + G   RPR+E+DQC+ CK++G
Sbjct: 470 VHREQDHRDRKRDKQLVKVLAIVIAGSKTGRDKGMQDRDQGDKRRPRVERDQCVYCKERG 529

Query: 181 HWIKNCPEWIKGKEKPSK 234
           HW ++CP   KG+ +P +
Sbjct: 530 HWARDCPN--KGRPRPQQ 545


>ref|YP_009109699.1| p10 protein [Baboon endogenous virus strain M7]
          Length = 53

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 20/44 (45%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +1

Query: 103 KKAHEMGRSER-PRLEKDQCMKCKKKGHWIKNCPEWIKGKEKPS 231
           K+A + G + R P+++KDQC  CK++GHWIK+CP+  + ++KP+
Sbjct: 7   KRAGKSGETRRRPKVDKDQCAYCKERGHWIKDCPKRPRDQKKPA 50


>ref|XP_008249573.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103345965 [Oryctolagus cuniculus]
          Length = 1716

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/70 (34%), Positives = 41/70 (58%)
 Frame = +1

Query: 19  RKDKVSSEKVQEHVMMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGHWIKNC 198
           ++DK  ++ + + +    AG    Q+  ++  + G   RPR+EKDQC  CK++GHW ++C
Sbjct: 440 QRDKKKNKDLVKALATVVAGPKTRQDKGRQDRDQGDKWRPRVEKDQCAYCKERGHWARDC 499

Query: 199 PEWIKGKEKP 228
           P     KE+P
Sbjct: 500 P----NKERP 505


>ref|XP_007516022.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103107207 [Erinaceus europaeus]
          Length = 1741

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = +1

Query: 103 KKAHEMGRSERPRLEKDQCMKCKKKGHWIKNCPE 204
           KK  + GR ER RLEKDQC  CK+KGHW K CP+
Sbjct: 504 KKEEKQGRXERKRLEKDQCAYCKEKGHWAKECPK 537


>ref|XP_008266975.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103351067, partial [Oryctolagus cuniculus]
          Length = 1456

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +1

Query: 16  RRKDKVSSEKVQEHV-MMARAGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGHWIK 192
           RRKD+ + ++ ++ V ++A A     Q   ++  ++G   RPRL++DQC  CK++GHW K
Sbjct: 191 RRKDQRNKKRNKDLVKILATAVTGPEQTKGRQDRDLGDKRRPRLDRDQCAYCKERGHWAK 250

Query: 193 NCP 201
           +CP
Sbjct: 251 DCP 253


>ref|XP_017203830.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC108178319 [Oryctolagus cuniculus]
          Length = 1727

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +1

Query: 16  RRKDKVSSEKVQEHVMMAR--AGNPNLQENSKKAHEMGRSERPRLEKDQCMKCKKKGHWI 189
           R +D+   ++ ++  ++A   AG+    +  ++  + G   RPR+E+DQC  CK++GHW 
Sbjct: 444 REQDQRDRKRDKQXKVLATVVAGSKTGXDKGRQDRDQGDKRRPRVERDQCAYCKERGHWA 503

Query: 190 KNCPEWIKGKEKPSK 234
           ++CP   KG+ +P K
Sbjct: 504 RDCPN--KGRPRPHK 516