BLASTX nr result
ID: Ophiopogon24_contig00035142
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00035142
(418 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_014511228.1| DNA mismatch repair protein MSH3 [Vigna radi... 73 3e-12
ref|XP_007143395.1| hypothetical protein PHAVU_007G069100g [Phas... 73 3e-12
ref|XP_007143396.1| hypothetical protein PHAVU_007G069100g [Phas... 73 4e-12
ref|XP_017415779.1| PREDICTED: DNA mismatch repair protein MSH3 ... 73 4e-12
gb|KRG91487.1| hypothetical protein GLYMA_20G157600 [Glycine max... 70 3e-11
gb|KRG91489.1| hypothetical protein GLYMA_20G157600 [Glycine max... 70 3e-11
gb|KRG91484.1| hypothetical protein GLYMA_20G157600 [Glycine max] 70 3e-11
ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3 ... 70 3e-11
ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3 ... 70 3e-11
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3 ... 70 3e-11
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3 ... 70 3e-11
ref|XP_009385995.1| PREDICTED: DNA mismatch repair protein MSH3 ... 68 2e-10
gb|ONK79683.1| uncharacterized protein A4U43_C01F8980 [Asparagus... 67 3e-10
ref|XP_020241315.1| DNA mismatch repair protein MSH3 [Asparagus ... 67 3e-10
ref|XP_010934727.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 67 4e-10
ref|XP_016725118.1| PREDICTED: DNA mismatch repair protein MSH3-... 66 7e-10
ref|XP_016725117.1| PREDICTED: DNA mismatch repair protein MSH3-... 66 7e-10
ref|XP_016725116.1| PREDICTED: DNA mismatch repair protein MSH3-... 66 7e-10
ref|XP_016725115.1| PREDICTED: DNA mismatch repair protein MSH3-... 66 7e-10
ref|XP_021274186.1| LOW QUALITY PROTEIN: DNA mismatch repair pro... 66 7e-10
>ref|XP_014511228.1| DNA mismatch repair protein MSH3 [Vigna radiata var. radiata]
Length = 1084
Score = 73.2 bits (178), Expect = 3e-12
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLN 135
++PP K + L EPS+PSL +R+L K LE EH LE QVL L
Sbjct: 61 LTPPSKLQKLQ---EPSSPSLHQRFLQKFLEPSSPEHPPPPSSSKCPTYTPLEQQVLHLR 117
Query: 134 SKHPYILLMDEVGYRFRFFGQDGEHS 57
+KHP +LLM EVGYR+RFFG+D E++
Sbjct: 118 TKHPNVLLMVEVGYRYRFFGKDAENA 143
>ref|XP_007143395.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
Length = 851
Score = 72.8 bits (177), Expect = 3e-12
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLN 135
I+PP+K + L +EPS+ SL +R+L K LE +H LE QVL L
Sbjct: 55 ITPPRKLQKL---LEPSSSSLHQRFLHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLR 111
Query: 134 SKHPYILLMDEVGYRFRFFGQDGEHS 57
+KHP +LLM EVGYR+RFF QD EH+
Sbjct: 112 AKHPDVLLMVEVGYRYRFFAQDAEHA 137
>ref|XP_007143396.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
Length = 1075
Score = 72.8 bits (177), Expect = 4e-12
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLN 135
I+PP+K + L +EPS+ SL +R+L K LE +H LE QVL L
Sbjct: 55 ITPPRKLQKL---LEPSSSSLHQRFLHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLR 111
Query: 134 SKHPYILLMDEVGYRFRFFGQDGEHS 57
+KHP +LLM EVGYR+RFF QD EH+
Sbjct: 112 AKHPDVLLMVEVGYRYRFFAQDAEHA 137
>ref|XP_017415779.1| PREDICTED: DNA mismatch repair protein MSH3 [Vigna angularis]
gb|KOM35979.1| hypothetical protein LR48_Vigan02g212900 [Vigna angularis]
dbj|BAT94198.1| hypothetical protein VIGAN_08077500 [Vigna angularis var.
angularis]
Length = 1083
Score = 72.8 bits (177), Expect = 4e-12
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLN 135
++PP+K + L EPS+P L +R+L K LE EH LE QVL L
Sbjct: 60 LTPPRKLQKLQ---EPSSPLLHQRFLQKFLEPSSPEHPPPPSSSKCPTYTPLEQQVLHLR 116
Query: 134 SKHPYILLMDEVGYRFRFFGQDGEHS 57
+KHP +LLM EVGYR+RFFGQD E++
Sbjct: 117 AKHPDVLLMVEVGYRYRFFGQDAENA 142
>gb|KRG91487.1| hypothetical protein GLYMA_20G157600 [Glycine max]
gb|KRG91488.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 756
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>gb|KRG91489.1| hypothetical protein GLYMA_20G157600 [Glycine max]
gb|KRG91490.1| hypothetical protein GLYMA_20G157600 [Glycine max]
gb|KRG91491.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 835
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>gb|KRG91484.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 888
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X4 [Glycine
max]
gb|KRG91485.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 967
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X3 [Glycine
max]
gb|KRG91483.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 968
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Glycine
max]
gb|KRG91480.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 991
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Glycine
max]
gb|KRG91481.1| hypothetical protein GLYMA_20G157600 [Glycine max]
Length = 1070
Score = 70.1 bits (170), Expect = 3e-11
Identities = 40/82 (48%), Positives = 48/82 (58%)
Frame = -3
Query: 302 KKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXLELQVLDLNSKHP 123
K PK T P PSL +R+L KLLE P + LE QVLDL +KHP
Sbjct: 52 KHPKLSPHTQNPVPPSLHQRFLQKLLE-PSTPQQHPASSSKPPTYTPLEQQVLDLKAKHP 110
Query: 122 YILLMDEVGYRFRFFGQDGEHS 57
+LLM EVGY++RFFGQD EH+
Sbjct: 111 DVLLMVEVGYKYRFFGQDAEHA 132
>ref|XP_009385995.1| PREDICTED: DNA mismatch repair protein MSH3 [Musa acuminata subsp.
malaccensis]
Length = 1077
Score = 67.8 bits (164), Expect = 2e-10
Identities = 44/99 (44%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Frame = -3
Query: 311 SPPKKPKTLT-------LTIEPSNPSLRRRYLSKLLE---------SPISEHXXXXXXXX 180
SPP KPK T I PSNP L RR+LSKLL+ S S
Sbjct: 56 SPPPKPKKSTPPSPQSPAAIPPSNPFLHRRFLSKLLDLSSPSSSSSSSSSSAAAAKPLPQ 115
Query: 179 XXXXXXLELQVLDLNSKHPYILLMDEVGYRFRFFGQDGE 63
LE QVLDL +K+P +LLM EVGY++RFFG+D E
Sbjct: 116 NPAYTPLEQQVLDLKTKYPDVLLMIEVGYKYRFFGEDAE 154
>gb|ONK79683.1| uncharacterized protein A4U43_C01F8980 [Asparagus officinalis]
Length = 1047
Score = 67.4 bits (163), Expect = 3e-10
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXL-ELQVLDL 138
I P KKPKT L SNP+L ++++SKL E S ELQVL+L
Sbjct: 53 IPPAKKPKTQNLP--SSNPTLHQKFVSKLFEPSTSPPPSTSALQNPNPKYTPLELQVLEL 110
Query: 137 NSKHPYILLMDEVGYRFRFFGQDGE 63
SK+P +LLM EVGY++RFFGQD E
Sbjct: 111 KSKYPDVLLMIEVGYKYRFFGQDAE 135
>ref|XP_020241315.1| DNA mismatch repair protein MSH3 [Asparagus officinalis]
Length = 1094
Score = 67.4 bits (163), Expect = 3e-10
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESPISEHXXXXXXXXXXXXXXL-ELQVLDL 138
I P KKPKT L SNP+L ++++SKL E S ELQVL+L
Sbjct: 53 IPPAKKPKTQNLP--SSNPTLHQKFVSKLFEPSTSPPPSTSALQNPNPKYTPLELQVLEL 110
Query: 137 NSKHPYILLMDEVGYRFRFFGQDGE 63
SK+P +LLM EVGY++RFFGQD E
Sbjct: 111 KSKYPDVLLMIEVGYKYRFFGQDAE 135
>ref|XP_010934727.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
[Elaeis guineensis]
Length = 1115
Score = 67.0 bits (162), Expect = 4e-10
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 308 PPKKPKTLTLTIEPSNPSLRRRYLSKLLESPI---SEHXXXXXXXXXXXXXXLELQVLDL 138
PP+KPK + P P +++LSKLLE P S LE QVL+L
Sbjct: 62 PPRKPKPSPSPLPPPTPPSTKKFLSKLLEPPSCFPSPSSTPQSLPPNPKYTPLEQQVLEL 121
Query: 137 NSKHPYILLMDEVGYRFRFFGQDGEHS 57
SK+P +LLM EVGYR+RFFG D E++
Sbjct: 122 KSKYPDVLLMIEVGYRYRFFGDDAENA 148
>ref|XP_016725118.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X4
[Gossypium hirsutum]
Length = 856
Score = 66.2 bits (160), Expect = 7e-10
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESP---ISEHXXXXXXXXXXXXXXLELQVL 144
+ P P T L SNPSL +++L KLL+ P + E LE QV+
Sbjct: 73 LKPTLSPHTHNLVPPQSNPSLHQKFLQKLLDPPSPPLLESSIEPSESDHKKYTPLEQQVV 132
Query: 143 DLNSKHPYILLMDEVGYRFRFFGQDGE 63
DL SK+P +LLM EVGYRFRFFG+D +
Sbjct: 133 DLKSKYPDVLLMVEVGYRFRFFGKDAD 159
>ref|XP_016725117.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X3
[Gossypium hirsutum]
Length = 861
Score = 66.2 bits (160), Expect = 7e-10
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESP---ISEHXXXXXXXXXXXXXXLELQVL 144
+ P P T L SNPSL +++L KLL+ P + E LE QV+
Sbjct: 73 LKPTLSPHTHNLVPPQSNPSLHQKFLQKLLDPPSPPLLESSIEPSESDHKKYTPLEQQVV 132
Query: 143 DLNSKHPYILLMDEVGYRFRFFGQDGE 63
DL SK+P +LLM EVGYRFRFFG+D +
Sbjct: 133 DLKSKYPDVLLMVEVGYRFRFFGKDAD 159
>ref|XP_016725116.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2
[Gossypium hirsutum]
Length = 896
Score = 66.2 bits (160), Expect = 7e-10
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESP---ISEHXXXXXXXXXXXXXXLELQVL 144
+ P P T L SNPSL +++L KLL+ P + E LE QV+
Sbjct: 73 LKPTLSPHTHNLVPPQSNPSLHQKFLQKLLDPPSPPLLESSIEPSESDHKKYTPLEQQVV 132
Query: 143 DLNSKHPYILLMDEVGYRFRFFGQDGE 63
DL SK+P +LLM EVGYRFRFFG+D +
Sbjct: 133 DLKSKYPDVLLMVEVGYRFRFFGKDAD 159
>ref|XP_016725115.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1
[Gossypium hirsutum]
Length = 1049
Score = 66.2 bits (160), Expect = 7e-10
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -3
Query: 314 ISPPKKPKTLTLTIEPSNPSLRRRYLSKLLESP---ISEHXXXXXXXXXXXXXXLELQVL 144
+ P P T L SNPSL +++L KLL+ P + E LE QV+
Sbjct: 73 LKPTLSPHTHNLVPPQSNPSLHQKFLQKLLDPPSPPLLESSIEPSESDHKKYTPLEQQVV 132
Query: 143 DLNSKHPYILLMDEVGYRFRFFGQDGE 63
DL SK+P +LLM EVGYRFRFFG+D +
Sbjct: 133 DLKSKYPDVLLMVEVGYRFRFFGKDAD 159
>ref|XP_021274186.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3 [Herrania
umbratica]
Length = 1126
Score = 66.2 bits (160), Expect = 7e-10
Identities = 44/97 (45%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Frame = -3
Query: 317 PISPPKKPKTLTLTIEP---------SNPSLRRRYLSKLLES---PISEHXXXXXXXXXX 174
P S PKKPKT T+ P SNPSL +++L KLLE P E
Sbjct: 63 PTSTPKKPKT---TLSPHTHNPVPLQSNPSLHQKFLQKLLEPSPPPPLEPTVELSESDPK 119
Query: 173 XXXXLELQVLDLNSKHPYILLMDEVGYRFRFFGQDGE 63
LE QV+ L +K+P +LLM EVGYRFRFFG+D E
Sbjct: 120 KYTPLEQQVVXLKNKYPDVLLMVEVGYRFRFFGKDAE 156