BLASTX nr result

ID: Ophiopogon24_contig00035085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00035085
         (354 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267181.1| protein SIEL [Asparagus officinalis] >gi|115...    52   6e-08

>ref|XP_020267181.1| protein SIEL [Asparagus officinalis]
 ref|XP_020267182.1| protein SIEL [Asparagus officinalis]
 gb|ONK67804.1| uncharacterized protein A4U43_C05F3950 [Asparagus officinalis]
          Length = 933

 Score = 52.0 bits (123), Expect(2) = 6e-08
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
 Frame = +2

Query: 2   LTQTRDRRCQHPTFTCHIINVISELPLSSGL*SQMAIEIVRSFIV----IAVDVLAVLNS 169
           L QT D R Q  +F  H+I VI +          +AI+++R F+     +  D LAV +S
Sbjct: 47  LIQTLDSRRQDSSFARHVIKVIGDAASVHRSLVPLAIQVIRPFLNGDDGVPADALAVFDS 106

Query: 170 LGEYSVLDENLAILLAXXXXXXXXXXXXEILKGSFSL 280
           LGEY +LDE L I LA            EIL  +  +
Sbjct: 107 LGEYDLLDEELVISLASSPIVSVRLRIVEILGSNLDM 143



 Score = 32.3 bits (72), Expect(2) = 6e-08
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +1

Query: 280 ILNHELMVIVLLGISTDIYPLLRTA 354
           +L  ELM+ VLLG+STDIYP +R +
Sbjct: 143 MLGLELMMRVLLGLSTDIYPSVRNS 167


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