BLASTX nr result
ID: Ophiopogon24_contig00034986
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00034986
(477 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KQK85804.1| hypothetical protein SETIT_020783mg [Setaria ital... 73 1e-22
gb|AAR86717.1| zinc finger protein [Populus euphratica] 97 6e-22
gb|OAY79498.1| Cytochrome c biogenesis CcmF C-terminal-like mito... 85 1e-16
gb|OAY72688.1| Cytochrome c biogenesis CcmF C-terminal-like mito... 85 3e-16
ref|YP_009242023.1| cytochrome c biogenesis Fc (mitochondrion) [... 71 3e-11
emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera] 65 8e-10
ref|XP_015057666.1| PREDICTED: cytochrome c biogenesis CcmF C-te... 66 9e-10
ref|XP_002462087.2| LOW QUALITY PROTEIN: uncharacterized protein... 65 3e-09
gb|KJB09756.1| hypothetical protein B456_001G162300 [Gossypium r... 64 6e-09
ref|XP_013442840.1| cytochrome C biogenesis protein CcmFC protei... 59 4e-08
gb|OTF84727.1| putative cytochrome c-type biogenesis protein Ccm... 61 9e-08
gb|EEF30699.1| conserved hypothetical protein [Ricinus communis] 56 1e-07
gb|OIW15545.1| hypothetical protein TanjilG_01068 [Lupinus angus... 60 2e-07
ref|XP_023753725.1| uncharacterized protein LOC111902082 [Lactuc... 50 3e-07
gb|OTG14543.1| hypothetical protein HannXRQ_Chr09g0250621 [Helia... 59 4e-07
gb|OWM62596.1| hypothetical protein CDL15_Pgr000019 [Punica gran... 54 1e-06
>gb|KQK85804.1| hypothetical protein SETIT_020783mg [Setaria italica]
Length = 461
Score = 72.8 bits (177), Expect(2) = 1e-22
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +2
Query: 191 LGGHERSGVRADWSDDAYCTYEISLRRLSRNGLGWN*KNAKR 316
+GGH+RSGVRADWSDD YCTY IS RLSRNGLGWN KNAK+
Sbjct: 262 MGGHKRSGVRADWSDDDYCTYYIS--RLSRNGLGWNRKNAKQ 301
Score = 61.2 bits (147), Expect(2) = 1e-22
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +1
Query: 322 GRFFGGGGISLLLHKLIPAPFPVRPDRQQL 411
G FFGGG ISLLLHKLIPAPFPVRPDRQQL
Sbjct: 320 GLFFGGGAISLLLHKLIPAPFPVRPDRQQL 349
>gb|AAR86717.1| zinc finger protein [Populus euphratica]
Length = 218
Score = 97.1 bits (240), Expect = 6e-22
Identities = 69/147 (46%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Frame = +3
Query: 3 GGNGLPKKPAPAGVSIE*RGRP*TLCWQRKRVAGG*KRTWGLGSGRSV--TTKGAIPFRA 176
GGNGLPKKPAP +G T V +W G R+ T GA P
Sbjct: 87 GGNGLPKKPAPGRGQHRMKGMALT------NVVSALPTSWVTGGERADVGTRVGAQPNEE 140
Query: 177 SMIVV----WAGTSDLVSEPIGQTTPTALMRLVSAAYPGMDWDGIERTRSAIGSVFWGWG 344
S ++ WAGTS LVS+ GQTT T+ +RLV AYPGM W+ R IG FWG G
Sbjct: 141 SHSILGETEWAGTSGLVSD--GQTTTTSFIRLVLPAYPGMKWNRRNAKRYRIGFFFWG-G 197
Query: 345 NKLASSQAYPRPVSCPSRPAAAGSPHL 425
+KLASSQA P RPAAAGSPHL
Sbjct: 198 DKLASSQA-------PPRPAAAGSPHL 217
>gb|OAY79498.1| Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein
[Ananas comosus]
Length = 341
Score = 85.1 bits (209), Expect = 1e-16
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +1
Query: 352 LLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
LL KLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV
Sbjct: 82 LLSSKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 123
>gb|OAY72688.1| Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein
[Ananas comosus]
Length = 495
Score = 85.1 bits (209), Expect = 3e-16
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +1
Query: 352 LLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
LL KLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV
Sbjct: 241 LLSSKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 282
>ref|YP_009242023.1| cytochrome c biogenesis Fc (mitochondrion) [Oryza minuta]
gb|AMQ23375.1| cytochrome c biogenesis Fc (mitochondrion) [Oryza minuta]
Length = 768
Score = 70.9 bits (172), Expect = 3e-11
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +2
Query: 2 RWERASQKASPGRGQHRMKGTALDVVLAKKAGCGRIKADVGTRVGAQR 145
RWERASQKASPG GQH M GTAL + GCGRIKADVGTRVGAQR
Sbjct: 400 RWERASQKASPGPGQHSMGGTAL---MLCWPGCGRIKADVGTRVGAQR 444
Score = 67.0 bits (162), Expect(2) = 2e-10
Identities = 39/70 (55%), Positives = 41/70 (58%), Gaps = 15/70 (21%)
Frame = +1
Query: 274 IPEWTGMELKEREA---------------L*GRFFGGGGISLLLHKLIPAPFPVRPDRQQ 408
IPEW GMELKEREA L GRF G + L + P PFPVRPDRQQ
Sbjct: 484 IPEWAGMELKEREATSKGSALCCLSAYVFLLGRFVFWGNL-LASSQAYPRPFPVRPDRQQ 542
Query: 409 LGLPISPQLP 438
LG PISPQLP
Sbjct: 543 LGFPISPQLP 552
Score = 25.8 bits (55), Expect(2) = 2e-10
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 413 VSPSLLNFPRSSARAV*GKNS 475
+SP L PRSSARAV G+NS
Sbjct: 547 ISPQL---PRSSARAVSGRNS 564
>emb|CAN83576.1| hypothetical protein VITISV_021757 [Vitis vinifera]
Length = 194
Score = 64.7 bits (156), Expect = 8e-10
Identities = 62/142 (43%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = +3
Query: 3 GGNGLPKKPAPAGVSIE*RGRP*TLCWQRKRVAGG*KRTWGLGSGRSVTTKGAIPFRASM 182
GGNGLPKKPA AG + W VAGG ++TWGLGSGRSV TK AIPFRA
Sbjct: 74 GGNGLPKKPARAGPT----------SW----VAGGEEQTWGLGSGRSV-TKRAIPFRARQ 118
Query: 183 IVVWAGTSDLVSEPIGQTTPTALMRLVSAAYPGMDWDGIERTR--SAIGSVFWGWGNKLA 356
G + V P RLV P IERTR SAIGSVF G G +
Sbjct: 119 ----NGRARAVWCP---------SRLVRRRLP----THIERTRSASAIGSVFLG-GIRWL 160
Query: 357 SSQAYPRPV-SCPSRPAAAGSP 419
+ P P SC P+ P
Sbjct: 161 LHKLIPAPTGSCEVSPSLLNFP 182
>ref|XP_015057666.1| PREDICTED: cytochrome c biogenesis CcmF C-terminal-like
mitochondrial protein [Solanum pennellii]
Length = 278
Score = 65.9 bits (159), Expect = 9e-10
Identities = 38/61 (62%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +1
Query: 301 KEREAL*--GRFFGGGGISLLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKL 474
KEREAL GRFFGG +L+ RPDRQ LG PIS +LPPVFGPSCMRQKL
Sbjct: 23 KEREALALQGRFFGGD-------RLVKKQAYPRPDRQLLGFPISSKLPPVFGPSCMRQKL 75
Query: 475 V 477
V
Sbjct: 76 V 76
>ref|XP_002462087.2| LOW QUALITY PROTEIN: uncharacterized protein LOC8063457 [Sorghum
bicolor]
Length = 316
Score = 64.7 bits (156), Expect = 3e-09
Identities = 40/77 (51%), Positives = 44/77 (57%), Gaps = 14/77 (18%)
Frame = +3
Query: 282 MDWDGIER-------------TRSAIGSVFWGWGN-KLASSQAYPRPVSCPSRPAAAGSP 419
MDWDG + T S S+F+G G KLASSQAYPRP+SC SRPAA GSP
Sbjct: 1 MDWDGNVKQQARDERFVAKAHTFSCSVSLFFGGGAIKLASSQAYPRPLSCLSRPAAVGSP 60
Query: 420 HLSSTSPGLRPELYEAK 470
HLSSTS P K
Sbjct: 61 HLSSTSAVFGPSCMRQK 77
>gb|KJB09756.1| hypothetical protein B456_001G162300 [Gossypium raimondii]
Length = 1286
Score = 64.3 bits (155), Expect = 6e-09
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = +1
Query: 340 GGISLLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
GG+ + + ++ + +P RPDRQ LGLPISP+LPPVFGPSCMRQKLV
Sbjct: 246 GGVCICMLGVLLSSYP-RPDRQLLGLPISPKLPPVFGPSCMRQKLV 290
>ref|XP_013442840.1| cytochrome C biogenesis protein CcmFC protein [Medicago truncatula]
gb|KEH16865.1| cytochrome C biogenesis protein CcmFC protein [Medicago truncatula]
Length = 860
Score = 58.9 bits (141), Expect(2) = 4e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 391 RPDRQQLGLPISPQLPPVFGPSCMRQKL 474
RPDRQ LGLPISP+LPPVFGPSCMRQKL
Sbjct: 414 RPDRQLLGLPISPKLPPVFGPSCMRQKL 441
Score = 26.2 bits (56), Expect(2) = 4e-08
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 309 RSAIGSVFWGWGNKLASSQAYPRP 380
R A + FWG ASSQAYPRP
Sbjct: 395 RGAYINGFWGG---FASSQAYPRP 415
>gb|OTF84727.1| putative cytochrome c-type biogenesis protein CcmF (mitochondrion)
[Helianthus annuus]
gb|AUR27259.1| cytochrome c biogenesis FC (mitochondrion) [Helianthus annuus]
Length = 539
Score = 60.8 bits (146), Expect = 9e-08
Identities = 35/59 (59%), Positives = 38/59 (64%)
Frame = +1
Query: 301 KEREAL*GRFFGGGGISLLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
K+REAL GRFFG KL+ RPD Q L L ISP+LPP FGPSCMRQKLV
Sbjct: 285 KKREALSGRFFGRD-------KLVKKEAYPRPDCQLLALSISPKLPPGFGPSCMRQKLV 336
>gb|EEF30699.1| conserved hypothetical protein [Ricinus communis]
Length = 72
Score = 56.2 bits (134), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +3
Query: 192 WAGTSDLVSEPIGQTTPTALMRLVSAAYPGMDWD 293
WAGTS LVS+PIGQ T T+ +RLV AAYPGM WD
Sbjct: 27 WAGTSGLVSKPIGQMTTTSFIRLVLAAYPGMKWD 60
>gb|OIW15545.1| hypothetical protein TanjilG_01068 [Lupinus angustifolius]
Length = 1048
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 370 IPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKL 474
IP+ +P RPDRQ L LPISP+LPPVFGPSCMRQKL
Sbjct: 578 IPSAYP-RPDRQLLDLPISPKLPPVFGPSCMRQKL 611
>ref|XP_023753725.1| uncharacterized protein LOC111902082 [Lactuca sativa]
Length = 269
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1
Query: 364 KLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
KL+ RPD Q L L ISP+LPP FGPSCMRQKLV
Sbjct: 20 KLVKKEAYPRPDCQLLALSISPKLPPGFGPSCMRQKLV 57
Score = 32.0 bits (71), Expect(2) = 3e-07
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 287 LGWN*KNAKRYRVGFLG 337
+GWN KN KRYR GF G
Sbjct: 1 MGWNRKNGKRYRFGFFG 17
>gb|OTG14543.1| hypothetical protein HannXRQ_Chr09g0250621 [Helianthus annuus]
Length = 482
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/59 (57%), Positives = 38/59 (64%)
Frame = +1
Query: 301 KEREAL*GRFFGGGGISLLLHKLIPAPFPVRPDRQQLGLPISPQLPPVFGPSCMRQKLV 477
K+REAL GRFFG KL+ RP+ Q L L ISP+LPP FGPSCMRQKLV
Sbjct: 266 KKREALSGRFFGRD-------KLVKKEAYPRPNCQLLALSISPKLPPGFGPSCMRQKLV 317
>gb|OWM62596.1| hypothetical protein CDL15_Pgr000019 [Punica granatum]
Length = 64
Score = 53.5 bits (127), Expect = 1e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -2
Query: 71 LGPSPSFYADPGRGWLFGKPVPT 3
LGPSPSFYADPG GWLFGKPVPT
Sbjct: 32 LGPSPSFYADPGPGWLFGKPVPT 54