BLASTX nr result
ID: Ophiopogon24_contig00034975
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00034975
(496 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010477907.2| PREDICTED: tubulin beta-2 chain-like [Cameli... 51 1e-08
ref|XP_021287540.1| tubulin beta-7 chain [Herrania umbratica] 53 2e-08
gb|KHN23648.1| Tubulin beta-1 chain [Glycine soja] 51 3e-08
ref|XP_010087906.1| tubulin beta-2 chain [Morus notabilis] >gi|5... 53 4e-08
gb|ANC98505.1| beta-tubulin, partial [Paeonia suffruticosa] 53 4e-08
ref|XP_006350813.1| PREDICTED: tubulin beta-2 chain-like [Solanu... 53 4e-08
ref|XP_004241186.1| PREDICTED: tubulin beta chain [Solanum lycop... 53 4e-08
gb|AQK93773.1| beta tubulin2 [Zea mays] 51 4e-08
ref|NP_001169637.1| beta tubulin 4 [Zea mays] >gi|224030571|gb|A... 48 4e-08
gb|KMZ64223.1| Tubulin beta-1 chain [Zostera marina] 52 5e-08
ref|XP_016204804.1| tubulin beta chain [Arachis ipaensis] 52 5e-08
ref|XP_015969832.1| tubulin beta chain [Arachis duranensis] 52 5e-08
ref|XP_006410628.1| tubulin beta chain isoform X1 [Eutrema salsu... 51 5e-08
ref|XP_022874431.1| tubulin beta-1 chain-like [Olea europaea var... 52 5e-08
ref|XP_020275972.1| tubulin beta-8 chain-like [Asparagus officin... 52 5e-08
ref|XP_008811481.1| PREDICTED: tubulin beta-8 chain-like [Phoeni... 52 5e-08
ref|XP_022862927.1| tubulin beta-8 chain-like [Olea europaea var... 52 5e-08
ref|XP_022001497.1| tubulin beta chain-like [Helianthus annuus] ... 52 5e-08
ref|XP_019167995.1| PREDICTED: tubulin beta-2 chain [Ipomoea nil] 52 5e-08
ref|XP_010676480.1| PREDICTED: tubulin beta-1 chain [Beta vulgar... 52 5e-08
>ref|XP_010477907.2| PREDICTED: tubulin beta-2 chain-like [Camelina sativa]
Length = 308
Score = 51.2 bits (121), Expect(2) = 1e-08
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RF+PRA LMDLEP T+DS+
Sbjct: 50 RINVYYNEASCGRFVPRAVLMDLEPGTMDSL 80
Score = 35.8 bits (81), Expect(2) = 1e-08
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AENYDCL G +
Sbjct: 119 SVLDVVRKEAENYDCLQGFQV 139
>ref|XP_021287540.1| tubulin beta-7 chain [Herrania umbratica]
Length = 444
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RR++PRA LMDLEP T+DS+
Sbjct: 46 RINVYYNEASGRRYVPRAVLMDLEPGTMDSL 76
Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQI 135
>gb|KHN23648.1| Tubulin beta-1 chain [Glycine soja]
Length = 446
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS R++PRA LMDLEP T+DS+
Sbjct: 46 RVNVYYNEASGGRYVPRAVLMDLEPGTMDSL 76
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNLY 172
SVLDVVRK+AEN DCL G+ ++
Sbjct: 115 SVLDVVRKEAENCDCLQGLQIF 136
>ref|XP_010087906.1| tubulin beta-2 chain [Morus notabilis]
gb|EXB30492.1| Tubulin beta-1 chain [Morus notabilis]
Length = 448
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RINVYYNEASTGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>gb|ANC98505.1| beta-tubulin, partial [Paeonia suffruticosa]
Length = 447
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASGGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_006350813.1| PREDICTED: tubulin beta-2 chain-like [Solanum tuberosum]
Length = 446
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASGGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_004241186.1| PREDICTED: tubulin beta chain [Solanum lycopersicum]
ref|XP_015079142.1| PREDICTED: tubulin beta chain-like [Solanum pennellii]
Length = 446
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASGGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>gb|AQK93773.1| beta tubulin2 [Zea mays]
Length = 298
Score = 50.8 bits (120), Expect(2) = 4e-08
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+D++
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDAV 76
Score = 34.3 bits (77), Expect(2) = 4e-08
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G++L
Sbjct: 115 SVLDVVRKEAENCDCLQGIDL 135
>ref|NP_001169637.1| beta tubulin 4 [Zea mays]
gb|ACN34361.1| unknown [Zea mays]
Length = 144
Score = 48.1 bits (113), Expect(2) = 4e-08
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEA R++PRA LMDLEP T++SI
Sbjct: 48 RINVYYNEAGGGRYVPRAVLMDLEPGTMESI 78
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNLYPRS 181
SVLDVVRK+AEN DCL GM+L+ S
Sbjct: 117 SVLDVVRKEAENCDCLQGMHLHINS 141
>gb|KMZ64223.1| Tubulin beta-1 chain [Zostera marina]
Length = 461
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DS+
Sbjct: 46 RVNVYYNEASGGRFVPRAVLMDLEPGTMDSV 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_016204804.1| tubulin beta chain [Arachis ipaensis]
Length = 457
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 54 RINVYYNEASGGRFVPRAVLMDLEPGTMDSI 84
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 123 SVLDVVRKEAENCDCLQGFQV 143
>ref|XP_015969832.1| tubulin beta chain [Arachis duranensis]
Length = 457
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 54 RINVYYNEASGGRFVPRAVLMDLEPGTMDSI 84
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 123 SVLDVVRKEAENCDCLQGFQV 143
>ref|XP_006410628.1| tubulin beta chain isoform X1 [Eutrema salsugineum]
gb|ESQ52081.1| hypothetical protein EUTSA_v10016629mg [Eutrema salsugineum]
Length = 456
Score = 51.2 bits (121), Expect(2) = 5e-08
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS R++PRA LMDLEP T+DSI
Sbjct: 46 RINVYYNEASGGRYVPRAVLMDLEPGTMDSI 76
Score = 33.5 bits (75), Expect(2) = 5e-08
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMN 166
SVLDVVRK+AEN DCL G N
Sbjct: 115 SVLDVVRKEAENCDCLQGNN 134
>ref|XP_022874431.1| tubulin beta-1 chain-like [Olea europaea var. sylvestris]
Length = 447
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DS+
Sbjct: 46 RVNVYYNEASGGRFVPRAVLMDLEPGTMDSV 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_020275972.1| tubulin beta-8 chain-like [Asparagus officinalis]
Length = 447
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_008811481.1| PREDICTED: tubulin beta-8 chain-like [Phoenix dactylifera]
Length = 446
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_022862927.1| tubulin beta-8 chain-like [Olea europaea var. sylvestris]
Length = 445
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_022001497.1| tubulin beta chain-like [Helianthus annuus]
gb|OTG01978.1| putative tubulin, Beta tubulin, autoregulation binding site
[Helianthus annuus]
Length = 445
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
R+NVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RINVYYNEASGGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_019167995.1| PREDICTED: tubulin beta-2 chain [Ipomoea nil]
Length = 445
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135
>ref|XP_010676480.1| PREDICTED: tubulin beta-1 chain [Beta vulgaris subsp. vulgaris]
gb|KMT12097.1| hypothetical protein BVRB_5g100510 [Beta vulgaris subsp. vulgaris]
Length = 445
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 1 RVNVYYNEASRRRFMPRAALMDLEPRTIDSI 93
RVNVYYNEAS RF+PRA LMDLEP T+DSI
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSI 76
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 107 SVLDVVRKKAENYDCL*GMNL 169
SVLDVVRK+AEN DCL G +
Sbjct: 115 SVLDVVRKEAENCDCLQGFQV 135