BLASTX nr result

ID: Ophiopogon24_contig00034954 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00034954
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251805.1| E3 ubiquitin-protein ligase SINA-like 10 [As...    64   2e-09

>ref|XP_020251805.1| E3 ubiquitin-protein ligase SINA-like 10 [Asparagus officinalis]
 gb|ONK81452.1| uncharacterized protein A4U43_C01F29240 [Asparagus officinalis]
          Length = 300

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = -2

Query: 357 SLHLKASATNILKWEGVYPCEVFLMVPQNFCSSSEDIALDARIQ 226
           SL LKASA N+ KWEGVYP +VFL+VPQNFCSS  DI L+  I+
Sbjct: 255 SLQLKASAINVRKWEGVYPSKVFLLVPQNFCSSYVDIVLNVCIK 298


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