BLASTX nr result

ID: Ophiopogon24_contig00034950 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00034950
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74633.1| uncharacterized protein A4U43_C03F8500 [Asparagus...    68   1e-11

>gb|ONK74633.1| uncharacterized protein A4U43_C03F8500 [Asparagus officinalis]
          Length = 132

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +2

Query: 71  MRPTDKAPVAVPSMSALELKDQAKPNXXXXXXQAWLFPRSVDSTGREIRSKDVKGS--ED 244
           MRP + A VAV  +SA +LKDQ KP+      +A    RS++ +  EI+SKDVKG+  E+
Sbjct: 63  MRPGENASVAV--ISAHQLKDQGKPSSSSSQVRA--LQRSLNRSESEIKSKDVKGNSVEE 118

Query: 245 SLRMIVFLGSWGPN 286
           SLRM+VFLGSWGPN
Sbjct: 119 SLRMVVFLGSWGPN 132


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