BLASTX nr result
ID: Ophiopogon24_contig00034870
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00034870
(424 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMO58913.1| reverse transcriptase [Corchorus capsularis] 131 1e-32
gb|OMO55593.1| reverse transcriptase [Corchorus capsularis] 130 4e-32
ref|XP_020262255.1| uncharacterized protein LOC109838206 [Aspara... 127 7e-32
gb|AIG55302.1| gag-pol, partial [Camellia sinensis] 127 4e-31
ref|XP_020264393.1| uncharacterized protein LOC109840234 [Aspara... 124 7e-31
gb|AAD04177.1| putative integrase, partial [Oryza sativa Indica ... 119 1e-30
gb|AAX92789.1| retrotransposon protein, putative, Ty3-gypsy sub-... 117 1e-30
ref|XP_024195831.1| uncharacterized protein LOC112198990 [Rosa c... 120 2e-30
gb|ABA94836.1| retrotransposon protein, putative, Ty3-gypsy subc... 122 2e-30
gb|OWK25887.1| hypothetical protein AJ87_49580 [Rhizobium yangli... 120 3e-30
gb|EOY03075.1| CCHC-type integrase [Theobroma cacao] 118 3e-30
gb|PRQ19855.1| putative nucleotidyltransferase, Ribonuclease H [... 124 5e-30
emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera] 120 5e-30
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group... 124 5e-30
gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subc... 124 5e-30
emb|CAJ65807.1| polyprotein, partial [Citrus sinensis] 122 6e-30
gb|OMO86567.1| reverse transcriptase [Corchorus capsularis] 123 7e-30
ref|XP_016472554.1| PREDICTED: uncharacterized protein LOC107794... 120 8e-30
gb|PKI35902.1| hypothetical protein CRG98_043708 [Punica granatum] 116 8e-30
gb|KYP69549.1| Retrotransposable element Tf2 [Cajanus cajan] 117 9e-30
>gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]
Length = 1477
Score = 131 bits (330), Expect = 1e-32
Identities = 57/82 (69%), Positives = 68/82 (82%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
+QC++CQQVK EHQR AG LQPLPIPEWKWE I MDFV+ LPRSPRGH ++WVIVDRLTK
Sbjct: 1149 AQCIVCQQVKVEHQRPAGQLQPLPIPEWKWEHITMDFVSGLPRSPRGHESVWVIVDRLTK 1208
Query: 181 SAHFIPFRVGQSMKSLTEVHAR 246
SAHFI +VG S++ L ++ R
Sbjct: 1209 SAHFIALKVGYSLEKLAALYVR 1230
>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
Length = 1385
Score = 130 bits (326), Expect = 4e-32
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
+QC++CQQVK EHQR AG LQPLPIPEWKWE I MDFV+ LPRSPRGH ++WVIVDRLTK
Sbjct: 1030 AQCIVCQQVKVEHQRPAGQLQPLPIPEWKWEHITMDFVSGLPRSPRGHESVWVIVDRLTK 1089
Query: 181 SAHFIPFRVGQSMKSLTEVHAR 246
SAHFI +VG S++ L ++ +
Sbjct: 1090 SAHFIALKVGYSLEKLAALYVQ 1111
>ref|XP_020262255.1| uncharacterized protein LOC109838206 [Asparagus officinalis]
Length = 472
Score = 127 bits (319), Expect = 7e-32
Identities = 55/78 (70%), Positives = 67/78 (85%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
++CL+CQQV+AEHQR GLLQP PIPEWKW+ + MDFVT+LPR R ++ +WVIVDRLTK
Sbjct: 23 AKCLVCQQVRAEHQRIIGLLQPFPIPEWKWQHVTMDFVTSLPRRTRQNDVVWVIVDRLTK 82
Query: 181 SAHFIPFRVGQSMKSLTE 234
SAHFIPFRVGQSM+ L +
Sbjct: 83 SAHFIPFRVGQSMEHLAQ 100
>gb|AIG55302.1| gag-pol, partial [Camellia sinensis]
Length = 923
Score = 127 bits (318), Expect = 4e-31
Identities = 59/82 (71%), Positives = 66/82 (80%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL CQQVKAEHQR AGLLQPLPI EWKWE I MDFV LPR+ RG +AIWV+VDRLTK
Sbjct: 542 SKCLTCQQVKAEHQRPAGLLQPLPIAEWKWEHITMDFVVGLPRTQRGSDAIWVVVDRLTK 601
Query: 181 SAHFIPFRVGQSMKSLTEVHAR 246
SAHFIP RV SM L +++ R
Sbjct: 602 SAHFIPMRVRDSMDHLADLYIR 623
>ref|XP_020264393.1| uncharacterized protein LOC109840234 [Asparagus officinalis]
Length = 426
Score = 124 bits (310), Expect = 7e-31
Identities = 55/78 (70%), Positives = 67/78 (85%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
++CLICQQVKAEH+R GLLQ LPIPEW+W+ + +DFVT LPRS R ++A+WVIVDRLTK
Sbjct: 117 AKCLICQQVKAEHRRIVGLLQLLPIPEWEWQHVTIDFVTGLPRSTRQNDAVWVIVDRLTK 176
Query: 181 SAHFIPFRVGQSMKSLTE 234
S HFIPFRVGQSM+ L +
Sbjct: 177 SVHFIPFRVGQSMEHLAQ 194
>gb|AAD04177.1| putative integrase, partial [Oryza sativa Indica Group]
Length = 218
Score = 119 bits (297), Expect = 1e-30
Identities = 53/78 (67%), Positives = 64/78 (82%)
Frame = +1
Query: 7 CLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKSA 186
C ICQ+VKAEHQR AGLLQPLPIPEWKWE+I MDF+T LPR+P +++IWVIVDRLTKSA
Sbjct: 93 CDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSRYDSIWVIVDRLTKSA 152
Query: 187 HFIPFRVGQSMKSLTEVH 240
HF+P + K L E++
Sbjct: 153 HFVPVKTTFDGKKLAELY 170
>gb|AAX92789.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gb|AAX96172.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gb|ABA93406.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 158
Score = 117 bits (292), Expect = 1e-30
Identities = 52/78 (66%), Positives = 62/78 (79%)
Frame = +1
Query: 7 CLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKSA 186
C +CQ+VKAEHQR AGLLQPL IPEWKWE+I MDF+T LPR+ GH++IWV+VDRLTK A
Sbjct: 25 CDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVA 84
Query: 187 HFIPFRVGQSMKSLTEVH 240
HFIP S K L E++
Sbjct: 85 HFIPVHTTYSGKKLAELY 102
>ref|XP_024195831.1| uncharacterized protein LOC112198990 [Rosa chinensis]
Length = 323
Score = 120 bits (302), Expect = 2e-30
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CLICQQVKAE Q+ +GLLQPLPIPEWKWE I MDFV+ LPR+ GH++IWVIVDRLTK
Sbjct: 10 SRCLICQQVKAERQKPSGLLQPLPIPEWKWEHITMDFVSGLPRTRNGHDSIWVIVDRLTK 69
Query: 181 SAHFIPFRVGQSMKSLTEVH 240
SAHF+P M L E++
Sbjct: 70 SAHFLPINKTYGMNKLAELY 89
>gb|ABA94836.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 386
Score = 122 bits (305), Expect = 2e-30
Identities = 54/78 (69%), Positives = 65/78 (83%)
Frame = +1
Query: 7 CLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKSA 186
C ICQ+VKAEHQR AGLLQPLPIPEWKWE+I MDF+T LPR+P G+++IWVIVDRLTKSA
Sbjct: 25 CDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSIWVIVDRLTKSA 84
Query: 187 HFIPFRVGQSMKSLTEVH 240
HF+P + K L E++
Sbjct: 85 HFVPVKTTFDGKKLAELY 102
>gb|OWK25887.1| hypothetical protein AJ87_49580 [Rhizobium yanglingense]
Length = 336
Score = 120 bits (302), Expect = 3e-30
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +1
Query: 4 QCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKS 183
+C CQQVKAEHQR AG LQPL IPEWKWE I+MDFVT LP++ +GH+ IWVIVDRLTKS
Sbjct: 24 RCTTCQQVKAEHQRPAGYLQPLAIPEWKWEAISMDFVTGLPKTVKGHDGIWVIVDRLTKS 83
Query: 184 AHFIPFRVGQSMKSLTEVH 240
AHF+P R+ SM L E++
Sbjct: 84 AHFLPVRMTYSMDQLAELY 102
>gb|EOY03075.1| CCHC-type integrase [Theobroma cacao]
Length = 246
Score = 118 bits (296), Expect = 3e-30
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL+CQQVK EHQ+ AGLLQPLP+PEWKWE IAMDFVT LPR+ G+++IW+IVDRLTK
Sbjct: 170 SKCLVCQQVKVEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIIVDRLTK 229
Query: 181 SAHFIPFR 204
SAHF+P +
Sbjct: 230 SAHFLPVK 237
>gb|PRQ19855.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
Length = 1024
Score = 124 bits (310), Expect = 5e-30
Identities = 62/110 (56%), Positives = 77/110 (70%), Gaps = 11/110 (10%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL CQ+VKAEHQR AG+L+PLPIP WKWE+I+MDFVT LPRS R H+A+WVIVDRLTK
Sbjct: 696 SKCLTCQRVKAEHQRPAGMLKPLPIPVWKWEQISMDFVTGLPRSKRSHDAVWVIVDRLTK 755
Query: 181 SAHFIPFRVGQSMKSLTEVH-------ARSC----KTSWSSNQYCICFPY 297
SAHF+P + S+ L E++ R+C K SW + I F Y
Sbjct: 756 SAHFLPVSMTYSVDMLCELYIEVLEDMLRACVLDFKGSWEDHLPLIEFSY 805
>emb|CAN71472.1| hypothetical protein VITISV_040055 [Vitis vinifera]
Length = 374
Score = 120 bits (302), Expect = 5e-30
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
+QCL+CQQVKAEHQR AG LQPL IPEWKWE I MDFV LPR+ G+NAIWVIVDRLTK
Sbjct: 10 AQCLVCQQVKAEHQRPAGSLQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTK 69
Query: 181 SAHFIPFRVGQSMKSLTEVHAR 246
SAHF+P +V S+ L ++ +
Sbjct: 70 SAHFLPMKVNFSLDRLASLYVK 91
>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAV59415.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1649
Score = 124 bits (310), Expect = 5e-30
Identities = 54/78 (69%), Positives = 65/78 (83%)
Frame = +1
Query: 7 CLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKSA 186
C ICQ+VKAEHQR AGLLQPLPIPEWKWE+I MDF+T LPR+P G+++IWVIVDRLTKSA
Sbjct: 1271 CDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSA 1330
Query: 187 HFIPFRVGQSMKSLTEVH 240
HF+P + K L E++
Sbjct: 1331 HFVPVKTSYDGKKLAELY 1348
>gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 124 bits (310), Expect = 5e-30
Identities = 54/78 (69%), Positives = 65/78 (83%)
Frame = +1
Query: 7 CLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTKSA 186
C ICQ+VKAEHQR AGLLQPLPIPEWKWE+I MDF+T LPR+P G+++IWVIVDRLTKSA
Sbjct: 1391 CDICQRVKAEHQRLAGLLQPLPIPEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSA 1450
Query: 187 HFIPFRVGQSMKSLTEVH 240
HF+P + K L E++
Sbjct: 1451 HFVPVKTSYDGKKLAELY 1468
>emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]
Length = 533
Score = 122 bits (307), Expect = 6e-30
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL+CQQ+KAEHQR AG QPLPIPEWKWE I MDFVT LPR+ GH+ +WV+VDRLTK
Sbjct: 400 SRCLVCQQIKAEHQRPAGFSQPLPIPEWKWEHITMDFVTGLPRTQSGHDGVWVVVDRLTK 459
Query: 181 SAHFIPFRVGQSMKSLTEV 237
S HF+PF+ SM L +
Sbjct: 460 STHFLPFKTTYSMDKLGNI 478
>gb|OMO86567.1| reverse transcriptase [Corchorus capsularis]
Length = 1347
Score = 123 bits (309), Expect = 7e-30
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL+CQQVKAEHQ+ AG LQPLPIPEWKWE I MDF++ LPR+ GH+AIWVIVDRLTK
Sbjct: 967 SRCLVCQQVKAEHQKPAGTLQPLPIPEWKWEHITMDFISGLPRTRHGHDAIWVIVDRLTK 1026
Query: 181 SAHFIPFRVGQSMKSLTEVH 240
SAHF+P R+ S + L ++
Sbjct: 1027 SAHFLPVRITFSTERLARLY 1046
>ref|XP_016472554.1| PREDICTED: uncharacterized protein LOC107794570 [Nicotiana tabacum]
Length = 381
Score = 120 bits (301), Expect = 8e-30
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S+CL+CQQ+KAEHQ AGLLQPL IPEWKWE+I MDFV+ LP + R H+AIWVIVDRLTK
Sbjct: 118 SKCLVCQQIKAEHQVPAGLLQPLSIPEWKWERITMDFVSGLPHTQRNHDAIWVIVDRLTK 177
Query: 181 SAHFIPFRVGQSMKSLTEVH 240
SAHF+ R+ S++ L E++
Sbjct: 178 SAHFLAIRMDYSLERLAELY 197
>gb|PKI35902.1| hypothetical protein CRG98_043708 [Punica granatum]
Length = 201
Score = 116 bits (290), Expect = 8e-30
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
++CL+CQQVKAEHQ +GLLQPLP+PEWKWEKI M+FV+ LPR+ RGH++IWVIVDRLTK
Sbjct: 10 AKCLVCQQVKAEHQHPSGLLQPLPVPEWKWEKITMNFVSGLPRTGRGHDSIWVIVDRLTK 69
Query: 181 SAHFI 195
SAHF+
Sbjct: 70 SAHFL 74
>gb|KYP69549.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 261
Score = 117 bits (294), Expect = 9e-30
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = +1
Query: 1 SQCLICQQVKAEHQRTAGLLQPLPIPEWKWEKIAMDFVTALPRSPRGHNAIWVIVDRLTK 180
S CL+CQ+ K EHQ+ +GLLQPL IPEWKW+ I+MDFV ALPR+ RGH++IWVIVDRLTK
Sbjct: 103 SACLVCQKAKIEHQKPSGLLQPLSIPEWKWDSISMDFVVALPRTRRGHDSIWVIVDRLTK 162
Query: 181 SAHFIPFRVGQSMKSLTEVH 240
SAHF+P + S++ L ++
Sbjct: 163 SAHFLPINIRYSLERLARLY 182