BLASTX nr result

ID: Ophiopogon24_contig00034592 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00034592
         (662 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus...   140   1e-34
ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparag...   140   1e-34

>gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus officinalis]
          Length = 1725

 Score =  140 bits (353), Expect = 1e-34
 Identities = 80/168 (47%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ESATSENLLQQINAEALKSQKDTFQLPGETISPQKKQVGDGLQVEPSTGQFGNSMPSLDA 182
           E+ATSEN   QI AEAL S KD FQL  E I PQ+KQVGD       TG+  NS  SL+ 
Sbjct: 422 ENATSENQSTQICAEALNSHKDAFQLQREIIPPQRKQVGDSSPAGLFTGEVANSKSSLET 481

Query: 183 PVIQRSGFGPRNDVTPAVNLFSDSSAKKFEGTGSVGKMANETPAAMHASTKDV--EHGEV 356
                SGF  RN++TP++N+ S++S K   GT S GK+A+E PA+M+++ KDV  +HGEV
Sbjct: 482 ---HGSGFILRNNMTPSINVLSNTSTKVVGGTTSSGKIASEPPASMYSNKKDVASQHGEV 538

Query: 357 GKTVVGSARAGAVPFGLQSSGKFSGADIRPSSFTASRSFLSNSQERTK 500
            K +         PFG QS+    GA+I PS+FT +RS +S++++RTK
Sbjct: 539 SKRLFALTGVSEAPFGSQSTENIFGANISPSTFTLTRSVVSDAEQRTK 586


>ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparagus officinalis]
          Length = 1743

 Score =  140 bits (353), Expect = 1e-34
 Identities = 80/168 (47%), Positives = 108/168 (64%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ESATSENLLQQINAEALKSQKDTFQLPGETISPQKKQVGDGLQVEPSTGQFGNSMPSLDA 182
           E+ATSEN   QI AEAL S KD FQL  E I PQ+KQVGD       TG+  NS  SL+ 
Sbjct: 460 ENATSENQSTQICAEALNSHKDAFQLQREIIPPQRKQVGDSSPAGLFTGEVANSKSSLET 519

Query: 183 PVIQRSGFGPRNDVTPAVNLFSDSSAKKFEGTGSVGKMANETPAAMHASTKDV--EHGEV 356
                SGF  RN++TP++N+ S++S K   GT S GK+A+E PA+M+++ KDV  +HGEV
Sbjct: 520 ---HGSGFILRNNMTPSINVLSNTSTKVVGGTTSSGKIASEPPASMYSNKKDVASQHGEV 576

Query: 357 GKTVVGSARAGAVPFGLQSSGKFSGADIRPSSFTASRSFLSNSQERTK 500
            K +         PFG QS+    GA+I PS+FT +RS +S++++RTK
Sbjct: 577 SKRLFALTGVSEAPFGSQSTENIFGANISPSTFTLTRSVVSDAEQRTK 624


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