BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00034573
         (507 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244656.1| pentatricopeptide repeat-containing protein ...   137   9e-35
ref|XP_008775328.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-28
ref|XP_021685038.1| pentatricopeptide repeat-containing protein ...   109   3e-28
ref|XP_021632807.1| pentatricopeptide repeat-containing protein ...   108   3e-28
ref|XP_021901136.1| pentatricopeptide repeat-containing protein ...   107   5e-28
ref|XP_010921976.1| PREDICTED: pentatricopeptide repeat-containi...   119   5e-28
ref|XP_012088342.1| pentatricopeptide repeat-containing protein ...   107   1e-27
gb|ACN85298.1| EMB2261 putative [Oryza coarctata]                     102   3e-27
ref|XP_009420205.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-27
ref|XP_020107518.1| pentatricopeptide repeat-containing protein ...    99   4e-27
gb|OAY78436.1| Pentatricopeptide repeat-containing protein [Anan...    99   4e-27
gb|PKU85181.1| Pentatricopeptide repeat-containing protein [Dend...   107   7e-27
ref|XP_020671867.1| pentatricopeptide repeat-containing protein ...   107   7e-27
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   106   2e-26
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-26
ref|XP_006841755.1| pentatricopeptide repeat-containing protein ...    95   3e-26
gb|PNT08353.1| hypothetical protein POPTR_013G145000v3 [Populus ...   103   1e-25
ref|XP_002319916.2| pentatricopeptide repeat-containing family p...   103   1e-25
dbj|GAV82811.1| PPR domain-containing protein/PPR_2 domain-conta...   100   1e-25
ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-25

>ref|XP_020244656.1| pentatricopeptide repeat-containing protein At1g03540 [Asparagus
           officinalis]
 gb|ONK61193.1| uncharacterized protein A4U43_C08F27180 [Asparagus officinalis]
          Length = 605

 Score =  137 bits (346), Expect = 9e-35
 Identities = 66/102 (64%), Positives = 83/102 (81%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +P +DVVS+TSL  A+LR N+P  AL L AQMPHSN++PNAFTLS AINA K++ DV
Sbjct: 86  FDHLPIRDVVSFTSLVVAHLRRNQPQHALRLFAQMPHSNVQPNAFTLSAAINACKNLGDV 145

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LGK  HG+VF+RGLD N+VI SSLI+MYG N AL+++ KVF
Sbjct: 146 KLGKSIHGLVFIRGLDSNFVIVSSLIDMYGRNDALDDANKVF 187



 Score =  110 bits (274), Expect = 8e-25
 Identities = 52/73 (71%), Positives = 60/73 (82%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G+    RKVFDRM VKN +SWCALL+GYCQ+GEY++VI LFR+MDKE D DHY+ GTVLR
Sbjct: 285 GLVGDSRKVFDRMTVKNVISWCALLSGYCQNGEYESVIRLFREMDKESDGDHYSFGTVLR 344

Query: 469 ACAGLAAVRLGKE 507
           ACA LAAVR G E
Sbjct: 345 ACAALAAVRHGME 357


>ref|XP_008775328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Phoenix dactylifera]
          Length = 641

 Score =  120 bits (300), Expect = 2e-28
 Identities = 53/104 (50%), Positives = 76/104 (73%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           F+S+P KDV+SWTS+ S Y+R  +P  +L +  +M    I PNAFTLS AI A  D+ D+
Sbjct: 118 FESLPLKDVISWTSMVSGYIRAGRPTESLLMFGKMQAFGIEPNAFTLSAAIKACSDLKDI 177

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
           ++G CFH MV +RG D N+VIAS+L++MYG+N  LE++ +VFG+
Sbjct: 178 KIGSCFHAMVLLRGFDLNHVIASALVDMYGKNFGLEDAWRVFGE 221



 Score =  100 bits (248), Expect = 3e-21
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G+ +  RKVFDRM  KN VSWCALL GYCQSG+Y+ V+A FR+MD E   +HY+ GT+LR
Sbjct: 313 GLMEESRKVFDRMPTKNAVSWCALLGGYCQSGDYETVLAQFREMDTE--ENHYSFGTILR 370

Query: 469 ACAGLAAVRLGKE 507
           ACAGL+AVR GK+
Sbjct: 371 ACAGLSAVRQGKQ 383


>ref|XP_021685038.1| pentatricopeptide repeat-containing protein At1g03540 [Hevea
           brasiliensis]
          Length = 623

 Score =  109 bits (273), Expect(2) = 3e-28
 Identities = 50/102 (49%), Positives = 72/102 (70%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  +DV+SWTS+ + Y+   KP +AL L  +M    ++PNAFTLS  I A  D+ D+
Sbjct: 116 FDGLYFRDVISWTSMITGYISVEKPKNALELFWEMLGFGVQPNAFTLSAVIKACSDLGDL 175

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LGKCFHG+V +RG D N+VIAS+LI+MYG N  L+++ ++F
Sbjct: 176 RLGKCFHGVVMIRGFDSNHVIASALIDMYGRNYGLDDARRLF 217



 Score = 43.1 bits (100), Expect(2) = 3e-28
 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR--DHYTIGTVLRACAG 480
           R++FD +   + + W ++++ + ++  Y   +  F  M +++    D +T GTVL AC  
Sbjct: 214 RRLFDELLEPDAICWTSVISAFTRNDMYDKALGFFFFMQRKLGLAPDGFTFGTVLTACGN 273

Query: 481 LAAVRLGKE 507
           L  ++ GKE
Sbjct: 274 LGRLKQGKE 282



 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 39/77 (50%), Positives = 58/77 (75%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G+    ++VF+RM +KN VSW ALL GYCQ+ ++++VI +FR+++   + D Y+ G
Sbjct: 306 YGKCGLVNESQRVFERMNIKNSVSWSALLGGYCQNKDFESVIRIFREVE---EVDLYSFG 362

Query: 457 TVLRACAGLAAVRLGKE 507
           TVLRACAGLAA++ GKE
Sbjct: 363 TVLRACAGLAAIKQGKE 379



 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHS-NIRPNAFTLSVAINASKDVND 178
           FD +   D + WTS+ SA+ R++    AL     M     + P+ FT    + A  ++  
Sbjct: 217 FDELLEPDAICWTSVISAFTRNDMYDKALGFFFFMQRKLGLAPDGFTFGTVLTACGNLGR 276

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   G   N V+ SSL++MYG+ G + ES +VF + +I+
Sbjct: 277 LKQGKEVHAKVITSGFSGNVVVESSLVDMYGKCGLVNESQRVFERMNIK 325


>ref|XP_021632807.1| pentatricopeptide repeat-containing protein At1g03540 [Manihot
           esculenta]
 gb|OAY34105.1| hypothetical protein MANES_13G150300 [Manihot esculenta]
          Length = 623

 Score =  108 bits (270), Expect(2) = 3e-28
 Identities = 50/102 (49%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  +DV+SWTS+ + Y+R  KP +AL L  +M    + PNAFTLS  I A  D+ D+
Sbjct: 116 FDGLYFRDVISWTSMITGYIRLEKPKNALKLFWEMLDFGVEPNAFTLSAMIKACSDLGDL 175

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LGKCFHG+V +RG D N+VIAS+LI+MYG N   +++  +F
Sbjct: 176 KLGKCFHGVVMIRGFDSNHVIASALIDMYGRNYGQDDARTLF 217



 Score = 44.3 bits (103), Expect(2) = 3e-28
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR--DHYTIGTVLRACAG 480
           R +FD +   + + W ++++ + ++  Y+  +  F  M ++I    D +T GTVL AC  
Sbjct: 214 RTLFDELLEPDAICWTSVISAFTRNDMYEKALGFFYLMQRKIGLTPDGFTFGTVLTACGN 273

Query: 481 LAAVRLGKE 507
           L  ++ GKE
Sbjct: 274 LGRLKQGKE 282



 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 40/77 (51%), Positives = 58/77 (75%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G+    ++VFDRM +KN VSW ALL GYCQ+ ++++VI +FR+M+   + D Y+ G
Sbjct: 306 YGKCGLVNESQRVFDRMSIKNSVSWSALLGGYCQNEDFESVIRIFREME---EVDLYSFG 362

Query: 457 TVLRACAGLAAVRLGKE 507
           T+LRACAGLAA++ GKE
Sbjct: 363 TILRACAGLAAIKQGKE 379



 Score = 67.0 bits (162), Expect = 8e-10
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHS-NIRPNAFTLSVAINASKDVND 178
           FD +   D + WTS+ SA+ R++    AL     M     + P+ FT    + A  ++  
Sbjct: 217 FDELLEPDAICWTSVISAFTRNDMYEKALGFFYLMQRKIGLTPDGFTFGTVLTACGNLGR 276

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   G   N V+ SSL++MYG+ G + ES +VF + SI+
Sbjct: 277 LKQGKEVHAKVITSGFSGNVVVESSLVDMYGKCGLVNESQRVFDRMSIK 325


>ref|XP_021901136.1| pentatricopeptide repeat-containing protein At1g03540 [Carica
           papaya]
          Length = 632

 Score =  107 bits (268), Expect(2) = 5e-28
 Identities = 49/102 (48%), Positives = 72/102 (70%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD++  KDV+SWTS+ S Y+R  KP+ +L L  +M    + PN FTLS  I A  ++ ++
Sbjct: 117 FDTLFFKDVISWTSMISGYVRVGKPMDSLELFFEMLDFGVEPNGFTLSAVIKACSEIEEL 176

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LGK FHG+V  RGLD N+VI+S+LI+MYG N  +E++ +VF
Sbjct: 177 KLGKSFHGVVITRGLDSNHVISSALIDMYGRNREIEDARRVF 218



 Score = 44.3 bits (103), Expect(2) = 5e-28
 Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +1

Query: 298 QGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRA 471
           +  R+VFD M   +   W ++++ + ++  ++  +  F  M +   ++ D +T+GTVL +
Sbjct: 212 EDARRVFDEMLEPDAFCWTSVISAFTRNDLFEKALGFFYLMQRNHGLNPDEFTLGTVLAS 271

Query: 472 CAGLAAVRLGKE 507
           C  L  +R G+E
Sbjct: 272 CGNLRRLRQGRE 283



 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 45/77 (58%), Positives = 56/77 (72%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G     + VF+RM  KN +SW ALL GYCQ+GEY+ VI +FRKM+K    D Y+ G
Sbjct: 307 YGKCGSVGEAQCVFNRMSKKNSISWSALLGGYCQNGEYEPVIEIFRKMEKS---DLYSFG 363

Query: 457 TVLRACAGLAAVRLGKE 507
           TVLRACAGLAA++LGKE
Sbjct: 364 TVLRACAGLAAIKLGKE 380



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           FD +   D   WTS+ SA+ R++    AL     M  ++ + P+ FTL   + +  ++  
Sbjct: 218 FDEMLEPDAFCWTSVISAFTRNDLFEKALGFFYLMQRNHGLNPDEFTLGTVLASCGNLRR 277

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCS 319
           +  G+  H MV   GL  N V+ SS+++MYG+ G++ E+  VF + S
Sbjct: 278 LRQGREIHAMVVSSGLCGNVVVESSIVDMYGKCGSVGEAQCVFNRMS 324


>ref|XP_010921976.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Elaeis guineensis]
          Length = 606

 Score =  119 bits (297), Expect = 5e-28
 Identities = 54/102 (52%), Positives = 74/102 (72%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           F+S+P KDV+SWTS+ S Y+R  +P  +L + A+M    + PNAFTLS AI A  D+ DV
Sbjct: 118 FESLPLKDVISWTSMVSGYVRAGRPTESLLMFAKMQAFGVEPNAFTLSAAIKACSDLKDV 177

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           ++G CFHGMV +RG D N VIA +L++MYG+N ALE++  VF
Sbjct: 178 KIGSCFHGMVLLRGFDLNDVIAGALVDMYGKNSALEDAWHVF 219



 Score =  100 bits (249), Expect = 2e-21
 Identities = 48/73 (65%), Positives = 58/73 (79%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G+ +  RKVFDRM  KN VSWCALL GYCQSG+Y+ V+A FR+MD E   +HY+ GT+LR
Sbjct: 313 GLMEESRKVFDRMPTKNAVSWCALLGGYCQSGDYETVLAQFREMDTE--DNHYSFGTILR 370

Query: 469 ACAGLAAVRLGKE 507
           ACAGL+AVR GKE
Sbjct: 371 ACAGLSAVRQGKE 383



 Score = 47.8 bits (112), Expect(2) = 2e-08
 Identities = 28/104 (26%), Positives = 50/104 (48%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +P K+ VSW +L   Y +         +LAQ    +   N ++    + A   ++ V
Sbjct: 322 FDRMPTKNAVSWCALLGGYCQSG---DYETVLAQFREMDTEDNHYSFGTILRACAGLSAV 378

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
             GK  H      G  R+ V+ S+L+++Y ++G ++ +  VF K
Sbjct: 379 RQGKEVHCRFLRTGGWRDVVVESALVDLYAKSGLIDYAYGVFTK 422



 Score = 38.5 bits (88), Expect(2) = 2e-08
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR-DHYTIGTVLRACAGLAA 489
           VF ++ ++N ++W A++ G+ Q+G+ +  I LF  M +E  R D+ +   VL AC+    
Sbjct: 419 VFTKIYMRNLITWNAMICGFAQNGQGREAIKLFNDMLREGARPDYISFIGVLFACSHAGL 478

Query: 490 VRLGK 504
           V  G+
Sbjct: 479 VEEGR 483


>ref|XP_012088342.1| pentatricopeptide repeat-containing protein At1g03540 [Jatropha
           curcas]
 gb|KDP24179.1| hypothetical protein JCGZ_25836 [Jatropha curcas]
          Length = 604

 Score =  107 bits (267), Expect(2) = 1e-27
 Identities = 49/102 (48%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  +DV+SWTS+ + Y++  KP +A+ L  +M    I PN FTLS AI AS D+ ++
Sbjct: 119 FDGLYFRDVISWTSMVTGYIKVGKPKNAIELFLEMLDFGIDPNGFTLSAAIKASSDLGNL 178

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LGKC HG+V  +G D NYVI+S+LI+MYG N  LE++ ++F
Sbjct: 179 RLGKCIHGVVISQGFDSNYVISSALIDMYGRNYGLEDACRLF 220



 Score = 43.5 bits (101), Expect(2) = 1e-27
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = +1

Query: 310 KVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR--DHYTIGTVLRACAGL 483
           ++FD +   + +SW ++++ + ++  Y   +  F  M +++    D +T GTVL AC  L
Sbjct: 218 RLFDDLLEPDAISWTSVISAFTRNDMYDKALGFFYLMQRKLGLAPDEFTFGTVLTACGNL 277

Query: 484 AAVRLGKE 507
             ++ GKE
Sbjct: 278 RRLKRGKE 285



 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G+    + VFDRM +KN VSW ALL GYCQ+G++++VI +FR+++     D Y+ G
Sbjct: 309 YGKCGLVMESQHVFDRMSIKNSVSWSALLGGYCQNGDFESVIRIFREVE---SHDLYSFG 365

Query: 457 TVLRACAGLAAVRLGKE 507
           TVLRAC+GLAA+R GKE
Sbjct: 366 TVLRACSGLAAIRQGKE 382



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHS-NIRPNAFTLSVAINASKDVND 178
           FD +   D +SWTS+ SA+ R++    AL     M     + P+ FT    + A  ++  
Sbjct: 220 FDDLLEPDAISWTSVISAFTRNDMYDKALGFFYLMQRKLGLAPDEFTFGTVLTACGNLRR 279

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   G   N V+ SSL++MYG+ G + ES  VF + SI+
Sbjct: 280 LKRGKEVHARVITSGFSGNVVVESSLVDMYGKCGLVMESQHVFDRMSIK 328


>gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
          Length = 621

 Score =  102 bits (254), Expect(2) = 3e-27
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLRACAGLA 486
           RKVFDRM+V+N VSWCALL GYCQ+GEY+ V+ALFR+MDK+ D D Y++GTVLRACAGL+
Sbjct: 293 RKVFDRMQVRNAVSWCALLGGYCQNGEYEKVVALFREMDKD-DDDWYSLGTVLRACAGLS 351

Query: 487 AVRLGKE 507
           +V  GKE
Sbjct: 352 SVNPGKE 358



 Score = 47.0 bits (110), Expect(2) = 3e-27
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           F+ +   D + +TSL SA++R++    A+     M   N +RP+  T    + A  ++  
Sbjct: 194 FEEMRTPDGICYTSLISAFVRNDWFEEAVRWSRSMLMLNGVRPDGCTFGSMMTALGNLKM 253

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSI 322
              G+  H  V  RGL  N ++ SS ++MY +   + E+ KVF +  +
Sbjct: 254 GNRGRQAHAQVVTRGLCGNVIVESSTLDMYAKCRMIVEARKVFDRMQV 301



 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQM--PHSNIRPNAFTLSVAINASKDVN 175
           FD +P +DVV+ +S+ +A+LR   P  AL+ L  M     ++ PNA   S A+ A   + 
Sbjct: 91  FDDLPRRDVVAHSSILAAFLRAGMPRRALSSLRSMLAGADDVSPNAHAFSAAVKACAVLR 150

Query: 176 DVELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           D   G C HG + VRG   + ++ S+L++MYG   A  ++ K F
Sbjct: 151 DRNAGACLHGSILVRGFGDDDIVLSALVDMYGHAAAPGDARKAF 194


>ref|XP_009420205.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Musa acuminata subsp. malaccensis]
          Length = 639

 Score =  116 bits (291), Expect = 4e-27
 Identities = 52/103 (50%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMP-HSNIRPNAFTLSVAINASKDVND 178
           F+S+P +DV+SWTS+ S Y+R  +P+ +L +  +M     + PNAFTLS A+ AS D+ D
Sbjct: 96  FESLPVRDVISWTSMVSGYVRAGRPLESLLMFVKMSTFGGVEPNAFTLSSAVKASSDLGD 155

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           V LG+CFHGMV  RG + N+VIAS+L+ MYG N ALE++ ++F
Sbjct: 156 VRLGRCFHGMVMTRGFETNHVIASALVYMYGRNSALEDARRMF 198



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 49/73 (67%), Positives = 54/73 (73%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G  +  RKVFDRM  KN VSWCALL GYCQ   Y+AV+ LFR MDK    DHY+ GTVLR
Sbjct: 293 GYMEDSRKVFDRMASKNAVSWCALLGGYCQGKNYRAVLNLFRVMDK--GDDHYSFGTVLR 350

Query: 469 ACAGLAAVRLGKE 507
           ACAGLAA+R GKE
Sbjct: 351 ACAGLAAIREGKE 363



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQM---PHSNIRPNAFTLSVAINASKDV 172
           FD +P  D + WTS+ S    +++   AL+    M       I P+ FT    + A  ++
Sbjct: 198 FDELPEPDAICWTSIISVLTWNDEFAKALSCFYSMIRRKELGIVPDGFTFGTIMTALGNL 257

Query: 173 NDVELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
                GK  H  V   GL  N V+ SS ++MY + G +E+S KVF +
Sbjct: 258 GRARQGKEAHAKVITSGLCGNVVVESSTLDMYAKCGYMEDSRKVFDR 304


>ref|XP_020107518.1| pentatricopeptide repeat-containing protein At1g03540 [Ananas
           comosus]
          Length = 626

 Score = 98.6 bits (244), Expect(2) = 4e-27
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLRACAGLA 486
           R+VFDRM  KN VSWCALL GYCQSG+++ V++LFR+MDK+ DR  Y++GT+LR+CAGLA
Sbjct: 302 RRVFDRMPAKNAVSWCALLGGYCQSGDHETVLSLFREMDKKEDR--YSLGTILRSCAGLA 359

Query: 487 AVRLGKE 507
           AVR GKE
Sbjct: 360 AVRPGKE 366



 Score = 50.4 bits (119), Expect(2) = 4e-27
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIR--PNAFTLSVAINASKDVN 175
           FD +   D + WTS+ SA  R+++   A+     M    +   P+ FT    + A  ++ 
Sbjct: 202 FDEMSEPDPICWTSIISALTRNDRFEEAVLHFYLMMRRGVGFPPDEFTFGTIMTALGNLG 261

Query: 176 DVELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
               GK  H  +   GL  N V+ SS ++MY +   +E+S +VF +
Sbjct: 262 RARQGKEAHAKLITTGLSGNVVVESSTLDMYAKCALVEDSRRVFDR 307



 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 52/106 (49%), Positives = 65/106 (61%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FDS+P  DVVS TS+ S Y R  +P  +L L A MP     PNAFTLS A  A  D+ DV
Sbjct: 101 FDSLPLPDVVSCTSIISGYARAGEPAESLRLFASMPSFGADPNAFTLSAAAKACSDLGDV 160

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCS 319
            LG   HGMV  RG + N VIAS+L++MYG   + E + +VF + S
Sbjct: 161 RLGGSVHGMVVARGFESNLVIASALVDMYGRCSSPEGARRVFDEMS 206


>gb|OAY78436.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 626

 Score = 98.6 bits (244), Expect(2) = 4e-27
 Identities = 46/67 (68%), Positives = 58/67 (86%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLRACAGLA 486
           R+VFDRM  KN VSWCALL GYCQSG+++ V++LFR+MDK+ DR  Y++GT+LR+CAGLA
Sbjct: 302 RRVFDRMPAKNAVSWCALLGGYCQSGDHETVLSLFREMDKKEDR--YSLGTILRSCAGLA 359

Query: 487 AVRLGKE 507
           AVR GKE
Sbjct: 360 AVRPGKE 366



 Score = 50.4 bits (119), Expect(2) = 4e-27
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIR--PNAFTLSVAINASKDVN 175
           FD +   D + WTS+ SA  R+++   A+     M    +   P+ FT    + A  ++ 
Sbjct: 202 FDEMSEPDPICWTSIISALTRNDRFEEAVLHFYLMMRRGVGFPPDEFTFGTIMTALGNLG 261

Query: 176 DVELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
               GK  H  +   GL  N V+ SS ++MY +   +E+S +VF +
Sbjct: 262 RARQGKEAHAKLITTGLSGNVVVESSTLDMYAKCALVEDSRRVFDR 307



 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 52/106 (49%), Positives = 65/106 (61%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FDS+P  DVVS TS+ S Y R  +P  +L L A MP     PNAFTLS A  A  D+ DV
Sbjct: 101 FDSLPLPDVVSCTSIISGYARAGEPAESLRLFASMPSFGADPNAFTLSAAAKACSDLGDV 160

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCS 319
            LG   HGMV  RG + N VIAS+L++MYG   + E + +VF + S
Sbjct: 161 RLGGSVHGMVVARGFESNLVIASALVDMYGRCSSPEGARRVFDEMS 206


>gb|PKU85181.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 628

 Score =  107 bits (268), Expect(2) = 7e-27
 Identities = 47/102 (46%), Positives = 70/102 (68%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +P KD++SWTS+ S Y+R   P+ +L +   M    + PNAFTLS A+ AS ++ ++
Sbjct: 113 FDVLPVKDIISWTSMVSGYVRAGLPVESLKVFISMSDVGVEPNAFTLSSAVKASSEMENL 172

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LG+CFHG V VRG   N VI+S+L++MYG N  +E++ K+F
Sbjct: 173 GLGQCFHGKVMVRGFSSNRVISSALVDMYGRNCRIEDARKLF 214



 Score = 40.4 bits (93), Expect(2) = 7e-27
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 298 QGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR---DHYTIGTVLR 468
           +  RK+F  M   + + W ++++ + Q+  ++  +  FR M + I     D + +GTVL 
Sbjct: 208 EDARKLFVEMPEPDAICWTSVISTFTQNDRFEEALGFFRGMLQRITSLVPDEFLLGTVLS 267

Query: 469 ACAGLAAVRLGKE 507
           A   L   R GKE
Sbjct: 268 ALGNLGRSRQGKE 280



 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 44/73 (60%), Positives = 54/73 (73%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G+    R+VFDRM  KN VSWCALL GYCQ+G++KAV+ LF+ MD   D + Y+  TVLR
Sbjct: 308 GIVDDSRQVFDRMENKNAVSWCALLGGYCQNGDFKAVLDLFQAMD--ADDNQYSFSTVLR 365

Query: 469 ACAGLAAVRLGKE 507
           ACAGL+AV  GKE
Sbjct: 366 ACAGLSAVMQGKE 378


>ref|XP_020671867.1| pentatricopeptide repeat-containing protein At1g03540 [Dendrobium
           catenatum]
          Length = 628

 Score =  107 bits (268), Expect(2) = 7e-27
 Identities = 47/102 (46%), Positives = 70/102 (68%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +P KD++SWTS+ S Y+R   P+ +L +   M    + PNAFTLS A+ AS ++ ++
Sbjct: 113 FDVLPVKDIISWTSMVSGYVRAGLPVESLKVFISMSDVGVEPNAFTLSSAVKASSEMENL 172

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LG+CFHG V VRG   N VI+S+L++MYG N  +E++ K+F
Sbjct: 173 GLGQCFHGKVMVRGFSSNRVISSALVDMYGRNCRIEDARKLF 214



 Score = 40.4 bits (93), Expect(2) = 7e-27
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 298 QGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR---DHYTIGTVLR 468
           +  RK+F  M   + + W ++++ + Q+  ++  +  FR M + I     D + +GTVL 
Sbjct: 208 EDARKLFVEMPEPDAICWTSVISTFTQNDRFEEALGFFRGMLQRITSLVPDEFLLGTVLS 267

Query: 469 ACAGLAAVRLGKE 507
           A   L   R GKE
Sbjct: 268 ALGNLGRSRQGKE 280



 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 44/73 (60%), Positives = 54/73 (73%)
 Frame = +1

Query: 289 GVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLR 468
           G+    R+VFDRM  KN VSWCALL GYCQ+G++KAV+ LF+ MD   D + Y+  TVLR
Sbjct: 308 GIVDDSRQVFDRMENKNAVSWCALLGGYCQNGDFKAVLDLFQAMD--ADDNQYSFSTVLR 365

Query: 469 ACAGLAAVRLGKE 507
           ACAGL+AV  GKE
Sbjct: 366 ACAGLSAVMQGKE 378


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  106 bits (265), Expect(2) = 2e-26
 Identities = 50/102 (49%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KDV+SWTS+ S Y+R  KP+++L L  +M    + PNAFTLS  I A  ++ D+
Sbjct: 177 FDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDL 236

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LG+ FHG+V  RG D NYVIAS+LI+M+G N AL+++ ++F
Sbjct: 237 KLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLF 278



 Score = 40.0 bits (92), Expect(2) = 2e-26
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRACAG 480
           R++FD +   + + W ++++   ++  +   +  F  M ++  +  D +T GTVL AC  
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334

Query: 481 LAAVRLGKE 507
           L  ++ GKE
Sbjct: 335 LGRLKQGKE 343



 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 44/77 (57%), Positives = 56/77 (72%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G     +++FDRM +KN VSW ALL GYCQ+G++K+VI +FRKM+K    D Y  G
Sbjct: 367 YGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV---DLYCFG 423

Query: 457 TVLRACAGLAAVRLGKE 507
           T+LR CAGLAAVR GKE
Sbjct: 424 TILRTCAGLAAVRQGKE 440



 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           FD +   D + WTS+ SA  R++    AL     M   + + P+ FT    + A  ++  
Sbjct: 278 FDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGR 337

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   G   N V+ SSL++MYG+ G++ ES ++F +  I+
Sbjct: 338 LKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 386


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Vitis vinifera]
          Length = 633

 Score =  106 bits (265), Expect(2) = 2e-26
 Identities = 50/102 (49%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KDV+SWTS+ S Y+R  KP+++L L  +M    + PNAFTLS  I A  ++ D+
Sbjct: 118 FDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDL 177

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LG+ FHG+V  RG D NYVIAS+LI+M+G N AL+++ ++F
Sbjct: 178 KLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLF 219



 Score = 40.0 bits (92), Expect(2) = 2e-26
 Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRACAG 480
           R++FD +   + + W ++++   ++  +   +  F  M ++  +  D +T GTVL AC  
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275

Query: 481 LAAVRLGKE 507
           L  ++ GKE
Sbjct: 276 LGRLKQGKE 284



 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 44/77 (57%), Positives = 56/77 (72%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G     +++FDRM +KN VSW ALL GYCQ+G++K+VI +FRKM+K    D Y  G
Sbjct: 308 YGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV---DLYCFG 364

Query: 457 TVLRACAGLAAVRLGKE 507
           T+LR CAGLAAVR GKE
Sbjct: 365 TILRTCAGLAAVRQGKE 381



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           FD +   D + WTS+ SA  R++    AL     M   + + P+ FT    + A  ++  
Sbjct: 219 FDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGR 278

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   G   N V+ SSL++MYG+ G++ ES ++F +  I+
Sbjct: 279 LKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 327


>ref|XP_006841755.1| pentatricopeptide repeat-containing protein At1g03540 [Amborella
           trichopoda]
 gb|ERN03430.1| hypothetical protein AMTR_s00003p00263110 [Amborella trichopoda]
          Length = 656

 Score = 94.7 bits (234), Expect(2) = 3e-26
 Identities = 46/102 (45%), Positives = 67/102 (65%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KDVV+WTS+ S+Y+R N+P  A  L ++M    + PN +TLS  I A  ++ ++
Sbjct: 111 FDFLALKDVVTWTSMISSYVRANEPKRAFELYSEMEEQGVEPNEYTLSSLIKACGEMGNL 170

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           E GK FH MV  +G + N VI S+LI+MYG+  + EE+ KVF
Sbjct: 171 ERGKLFHEMVSEKGFESNCVITSALIDMYGKCSSFEEARKVF 212



 Score = 51.6 bits (122), Expect(2) = 3e-26
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDK--EIDRDHYTIGTVLRACAG 480
           RKVFD    ++ + W +L+  Y Q+ ++K  + LF  M +   +  D +T GT + AC  
Sbjct: 209 RKVFDEREQRDTICWTSLMASYTQNNQFKEALELFMLMQRSPNVKPDGFTFGTAIAACGN 268

Query: 481 LAAVRLGKE 507
           L  ++ GK+
Sbjct: 269 LGLIKQGKQ 277



 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE-IDRDHYTI 453
           +G  G      KVFD M  +N V+WCALL GYCQ+G  +  +ALFR+M  E +  D Y +
Sbjct: 301 YGKCGFMDFAHKVFDDMNFRNSVTWCALLNGYCQNGYGEEALALFRRMQNEGMGGDSYGL 360

Query: 454 GTVLRACAGLAAVRLGKE 507
           GTVLRAC+ L+A+R GKE
Sbjct: 361 GTVLRACSSLSALRQGKE 378



 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHS-NIRPNAFTLSVAINASKDVND 178
           FD    +D + WTSL ++Y ++N+   AL L   M  S N++P+ FT   AI A  ++  
Sbjct: 212 FDEREQRDTICWTSLMASYTQNNQFKEALELFMLMQRSPNVKPDGFTFGTAIAACGNLGL 271

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           ++ GK  H    + G + N VI SS+I+MYG+ G ++ + KVF
Sbjct: 272 IKQGKQIHSKFIIIGYEMNVVILSSIIDMYGKCGFMDFAHKVF 314


>gb|PNT08353.1| hypothetical protein POPTR_013G145000v3 [Populus trichocarpa]
          Length = 606

 Score = 83.6 bits (205), Expect(2) = 1e-25
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLRACAGLAAV 492
           VFDRM VKN VSW ALL GYCQ+G++++VI +FR+  K    D Y+ GTVLRACAGLAAV
Sbjct: 321 VFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKV---DTYSFGTVLRACAGLAAV 377

Query: 493 RLGKE 507
           R GKE
Sbjct: 378 RQGKE 382



 Score = 60.8 bits (146), Expect(2) = 1e-25
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           F  +P  D + WTS+ SA+ R++    AL     M   + + P+ FT    + A  ++  
Sbjct: 220 FVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGR 279

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   GL  N  + SSL++MYG+   + +S  VF + S++
Sbjct: 280 LKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVK 328



 Score =  103 bits (257), Expect(2) = 3e-25
 Identities = 48/102 (47%), Positives = 69/102 (67%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KD++SWTS+ + Y++  KP  +L L  +M    I PN FTLS  I A   + D+
Sbjct: 119 FDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDL 178

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LGKCFHG+V VRG D N VI+++LI+MYG N A+++++ VF
Sbjct: 179 RLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVF 220



 Score = 39.3 bits (90), Expect(2) = 3e-25
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRACAGLA 486
           VF  +   + + W ++++ + ++  Y   +  F  M ++  +  D +T GTVL AC  L 
Sbjct: 219 VFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLG 278

Query: 487 AVRLGKE 507
            ++ GKE
Sbjct: 279 RLKQGKE 285


>ref|XP_002319916.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa]
          Length = 606

 Score = 83.6 bits (205), Expect(2) = 1e-25
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIGTVLRACAGLAAV 492
           VFDRM VKN VSW ALL GYCQ+G++++VI +FR+  K    D Y+ GTVLRACAGLAAV
Sbjct: 321 VFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKV---DTYSFGTVLRACAGLAAV 377

Query: 493 RLGKE 507
           R GKE
Sbjct: 378 RQGKE 382



 Score = 60.8 bits (146), Expect(2) = 1e-25
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           F  +P  D + WTS+ SA+ R++    AL     M   + + P+ FT    + A  ++  
Sbjct: 220 FVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGR 279

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H  V   GL  N  + SSL++MYG+   + +S  VF + S++
Sbjct: 280 LKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVK 328



 Score =  103 bits (257), Expect(2) = 3e-25
 Identities = 48/102 (47%), Positives = 69/102 (67%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KD++SWTS+ + Y++  KP  +L L  +M    I PN FTLS  I A   + D+
Sbjct: 119 FDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDL 178

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
            LGKCFHG+V VRG D N VI+++LI+MYG N A+++++ VF
Sbjct: 179 RLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVF 220



 Score = 39.3 bits (90), Expect(2) = 3e-25
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRACAGLA 486
           VF  +   + + W ++++ + ++  Y   +  F  M ++  +  D +T GTVL AC  L 
Sbjct: 219 VFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLG 278

Query: 487 AVRLGKE 507
            ++ GKE
Sbjct: 279 RLKQGKE 285


>dbj|GAV82811.1| PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 623

 Score = 99.8 bits (247), Expect(2) = 1e-25
 Identities = 45/102 (44%), Positives = 67/102 (65%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KDV+SWTS+ S Y+   KP S+L++  +M    + PN FTLS  I A  ++ D+
Sbjct: 120 FDGLFVKDVISWTSMISGYINAGKPRSSLDMFLEMLGFGVEPNGFTLSAVIKACSEIGDL 179

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LG+C HG+V  RG D N VI+S+LI+MYG N    ++ ++F
Sbjct: 180 KLGRCLHGVVMRRGFDSNQVISSALIDMYGRNFESNDARRLF 221



 Score = 44.7 bits (104), Expect(2) = 1e-25
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 307 RKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKE--IDRDHYTIGTVLRACAG 480
           R++FD M   + + W ++++ + ++  Y   +A F  + +   +  D +T GTVL AC  
Sbjct: 218 RRLFDEMPQPDAICWTSVISAFTRNDLYAEALAFFYSLQRNHGLMPDGFTFGTVLTACGN 277

Query: 481 LAAVRLGKE 507
           L  ++ GKE
Sbjct: 278 LGRLKQGKE 286



 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 45/77 (58%), Positives = 54/77 (70%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G     R+VFD+M VKN VSW ALL  YCQ+G+ ++VI LFR+M K    D Y  G
Sbjct: 310 YGKCGSVDVSRRVFDKMLVKNSVSWSALLGVYCQNGDLESVIKLFREMQK---ADLYCYG 366

Query: 457 TVLRACAGLAAVRLGKE 507
           TVLRAC+GLAAVR GKE
Sbjct: 367 TVLRACSGLAAVRQGKE 383



 Score = 67.0 bits (162), Expect = 8e-10
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSN-IRPNAFTLSVAINASKDVND 178
           FD +P  D + WTS+ SA+ R++    AL     +  ++ + P+ FT    + A  ++  
Sbjct: 221 FDEMPQPDAICWTSVISAFTRNDLYAEALAFFYSLQRNHGLMPDGFTFGTVLTACGNLGR 280

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGKCSIE 325
           ++ GK  H      GL  N VI SSL++MYG+ G+++ S +VF K  ++
Sbjct: 281 LKQGKEVHANAITSGLCGNVVIESSLVDMYGKCGSVDVSRRVFDKMLVK 329


>ref|XP_010268791.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540
           [Nelumbo nucifera]
          Length = 651

 Score =  105 bits (262), Expect(2) = 2e-25
 Identities = 50/102 (49%), Positives = 69/102 (67%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHSNIRPNAFTLSVAINASKDVNDV 181
           FD +  KDV+SWTS+ S YL   KP+ +L +  +M    + PNAFTLS AI A  ++  +
Sbjct: 117 FDCLLVKDVISWTSMISGYLHVGKPMESLEMFEKMLEFGVEPNAFTLSAAIKACSELGTL 176

Query: 182 ELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVF 307
           +LG+CFHG+V  RG D N VIAS+LI+MYG N  LE++  +F
Sbjct: 177 KLGRCFHGVVLGRGFDSNCVIASALIDMYGRNFYLEDACLLF 218



 Score = 37.7 bits (86), Expect(2) = 2e-25
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +1

Query: 313 VFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDR--DHYTIGTVLRACAGLA 486
           +F  M   + + W ++++ + ++  ++  +  F  M ++     D +T GTVL AC  L 
Sbjct: 217 LFVEMPQPDAICWTSVISAFTRNDRFEEALGFFYLMQRKYGLLPDGFTFGTVLTACGNLG 276

Query: 487 AVRLGKE 507
            ++ GKE
Sbjct: 277 RMKQGKE 283



 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = +1

Query: 277 WGVGGVTQGVRKVFDRMRVKNGVSWCALLTGYCQSGEYKAVIALFRKMDKEIDRDHYTIG 456
           +G  G+ +   KVFDRM  KN VSWCALL GYCQ+G++++ I +FR MDK +D D Y+ G
Sbjct: 307 YGKCGLVEESHKVFDRMPQKNSVSWCALLGGYCQNGDFESAIKIFRMMDK-VD-DLYSFG 364

Query: 457 TVLRACAGLAAVRLGKE 507
           TVLRACAGLAAVR GKE
Sbjct: 365 TVLRACAGLAAVRQGKE 381



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   FDSVPAKDVVSWTSLASAYLRHNKPISALNLLAQMPHS-NIRPNAFTLSVAINASKDVND 178
           F  +P  D + WTS+ SA+ R+++   AL     M     + P+ FT    + A  ++  
Sbjct: 218 FVEMPQPDAICWTSVISAFTRNDRFEEALGFFYLMQRKYGLLPDGFTFGTVLTACGNLGR 277

Query: 179 VELGKCFHGMVFVRGLDRNYVIASSLINMYGENGALEESLKVFGK 313
           ++ GK  H  V   G+  N V+ SSL++MYG+ G +EES KVF +
Sbjct: 278 MKQGKEVHAKVVTAGICGNLVVESSLVDMYGKCGLVEESHKVFDR 322