BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00034288
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010927102.2| PREDICTED: putative E3 ubiquitin-protein lig...    99   2e-20
ref|XP_008813287.1| PREDICTED: putative E3 ubiquitin-protein lig...    97   1e-19
ref|XP_009393279.1| PREDICTED: putative E3 ubiquitin-protein lig...    94   1e-18
ref|XP_010272313.1| PREDICTED: putative E3 ubiquitin-protein lig...    89   5e-17
ref|XP_021602151.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   2e-15
ref|XP_021602150.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   2e-15
ref|XP_021602148.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   2e-15
ref|XP_021602147.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   2e-15
ref|XP_021602146.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   2e-15
ref|XP_021295054.1| putative E3 ubiquitin-protein ligase LIN-1 i...    84   3e-15
ref|XP_021295053.1| putative E3 ubiquitin-protein ligase LIN-1 i...    84   3e-15
ref|XP_021295052.1| putative E3 ubiquitin-protein ligase LIN-1 i...    84   3e-15
ref|XP_021295050.1| putative E3 ubiquitin-protein ligase LIN-1 i...    84   3e-15
ref|XP_021295049.1| putative E3 ubiquitin-protein ligase LIN-2 i...    84   3e-15
ref|XP_017979490.1| PREDICTED: putative E3 ubiquitin-protein lig...    83   6e-15
gb|EOY27495.1| Transducin/WD40 repeat-like superfamily protein, ...    83   6e-15
gb|KQL28569.1| hypothetical protein SETIT_016202mg [Setaria ital...    83   6e-15
ref|XP_004951782.2| putative E3 ubiquitin-protein ligase LIN-1 [...    83   6e-15
ref|XP_015623592.1| PREDICTED: putative E3 ubiquitin-protein lig...    82   8e-15
gb|EEC72569.1| hypothetical protein OsI_06007 [Oryza sativa Indi...    82   8e-15

>ref|XP_010927102.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN [Elaeis
           guineensis]
          Length = 975

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSA-LCCLKNSAHSVIANLELGMESIERLV 74
           AAVRAVV ILS + GRFLKD   RRRLREKC+A L   K +AH+V+ANLELG+ESIERL 
Sbjct: 87  AAVRAVVLILSGYAGRFLKDGGFRRRLREKCNACLAARKGAAHAVLANLELGIESIERLA 146

Query: 73  E--GRGSSGELKIRSLRNAIRLLS 8
           E    G++ + KIRSLRN+IRLLS
Sbjct: 147 EEGPNGATRDSKIRSLRNSIRLLS 170


>ref|XP_008813287.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 [Phoenix
           dactylifera]
          Length = 970

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCLKN--SAHSVIANLELGMESIERL 77
           AAVRAVVSILS + GRFLKD   RRR+REKC+A    +   +AH+V+ANLELG+ESIERL
Sbjct: 73  AAVRAVVSILSGYAGRFLKDGGFRRRIREKCNACLAARKGAAAHAVLANLELGIESIERL 132

Query: 76  VE--GRGSSGELKIRSLRNAIRLLS 8
            E    G++ + KIRSLRN+IRLLS
Sbjct: 133 AEEGPNGATRDSKIRSLRNSIRLLS 157


>ref|XP_009393279.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Musa
           acuminata subsp. malaccensis]
          Length = 988

 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCL--KNSAHSVIANLELGMESIERL 77
           AA RAVVS+LS +TGRFLKD A RRRLR+KC+A      K  AH+V+ANLELG+ESIE L
Sbjct: 94  AAARAVVSVLSGYTGRFLKDEAFRRRLRDKCTACIATARKGVAHAVLANLELGIESIEWL 153

Query: 76  VE--GRGSSGELKIRSLRNAIRLLS 8
            E    G+  + KIRSLRN+IRLLS
Sbjct: 154 AEEGPHGAPRDSKIRSLRNSIRLLS 178


>ref|XP_010272313.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN [Nelumbo
           nucifera]
          Length = 1000

 Score = 89.0 bits (219), Expect = 5e-17
 Identities = 47/84 (55%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCL----KNSAHSVIANLELGMESIER 80
           AVRAVVSIL  + GRF+KD + R R+REKC +  C+    K+  ++++AN+ELG+ESIER
Sbjct: 105 AVRAVVSILGGYIGRFIKDESFRERVREKCYS--CMEGRSKDGDNAILANMELGIESIER 162

Query: 79  LVEGRGSSGELKIRSLRNAIRLLS 8
           L E  G+  ELK++SLRN+IRLLS
Sbjct: 163 LAENHGTKKELKMKSLRNSIRLLS 186


>ref|XP_021602151.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X5 [Manihot
           esculenta]
          Length = 764

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCC--LKNSAHSVIANLELGMESIERL 77
           AAVRAV+SIL  + GR++KD + R+ +R+KC++     +K+S   + AN+ELG+E IE+L
Sbjct: 93  AAVRAVISILGGYIGRYVKDLSFRKMIRDKCNSCLVKKIKDSDDGIFANMELGIEGIEKL 152

Query: 76  VEGRGSSGELKIRSLRNAIRLLS 8
           VE +G+  EL+++SLRN+I+LLS
Sbjct: 153 VEDQGTKKELRMKSLRNSIQLLS 175


>ref|XP_021602150.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X4 [Manihot
           esculenta]
          Length = 771

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCC--LKNSAHSVIANLELGMESIERL 77
           AAVRAV+SIL  + GR++KD + R+ +R+KC++     +K+S   + AN+ELG+E IE+L
Sbjct: 93  AAVRAVISILGGYIGRYVKDLSFRKMIRDKCNSCLVKKIKDSDDGIFANMELGIEGIEKL 152

Query: 76  VEGRGSSGELKIRSLRNAIRLLS 8
           VE +G+  EL+++SLRN+I+LLS
Sbjct: 153 VEDQGTKKELRMKSLRNSIQLLS 175


>ref|XP_021602148.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X3 [Manihot
           esculenta]
          Length = 928

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCC--LKNSAHSVIANLELGMESIERL 77
           AAVRAV+SIL  + GR++KD + R+ +R+KC++     +K+S   + AN+ELG+E IE+L
Sbjct: 93  AAVRAVISILGGYIGRYVKDLSFRKMIRDKCNSCLVKKIKDSDDGIFANMELGIEGIEKL 152

Query: 76  VEGRGSSGELKIRSLRNAIRLLS 8
           VE +G+  EL+++SLRN+I+LLS
Sbjct: 153 VEDQGTKKELRMKSLRNSIQLLS 175


>ref|XP_021602147.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X2 [Manihot
           esculenta]
          Length = 945

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCC--LKNSAHSVIANLELGMESIERL 77
           AAVRAV+SIL  + GR++KD + R+ +R+KC++     +K+S   + AN+ELG+E IE+L
Sbjct: 93  AAVRAVISILGGYIGRYVKDLSFRKMIRDKCNSCLVKKIKDSDDGIFANMELGIEGIEKL 152

Query: 76  VEGRGSSGELKIRSLRNAIRLLS 8
           VE +G+  EL+++SLRN+I+LLS
Sbjct: 153 VEDQGTKKELRMKSLRNSIQLLS 175


>ref|XP_021602146.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X1 [Manihot
           esculenta]
 gb|OAY22259.1| hypothetical protein MANES_S016500 [Manihot esculenta]
          Length = 966

 Score = 84.3 bits (207), Expect = 2e-15
 Identities = 41/83 (49%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCC--LKNSAHSVIANLELGMESIERL 77
           AAVRAV+SIL  + GR++KD + R+ +R+KC++     +K+S   + AN+ELG+E IE+L
Sbjct: 93  AAVRAVISILGGYIGRYVKDLSFRKMIRDKCNSCLVKKIKDSDDGIFANMELGIEGIEKL 152

Query: 76  VEGRGSSGELKIRSLRNAIRLLS 8
           VE +G+  EL+++SLRN+I+LLS
Sbjct: 153 VEDQGTKKELRMKSLRNSIQLLS 175


>ref|XP_021295054.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X5 [Herrania
           umbratica]
          Length = 972

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYVGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 ENRGNKKELRMKSLRNSIRLLS 185


>ref|XP_021295053.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X4 [Herrania
           umbratica]
          Length = 974

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYVGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 ENRGNKKELRMKSLRNSIRLLS 185


>ref|XP_021295052.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X3 [Herrania
           umbratica]
          Length = 979

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYVGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 ENRGNKKELRMKSLRNSIRLLS 185


>ref|XP_021295050.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Herrania
           umbratica]
          Length = 980

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYVGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 ENRGNKKELRMKSLRNSIRLLS 185


>ref|XP_021295049.1| putative E3 ubiquitin-protein ligase LIN-2 isoform X1 [Herrania
           umbratica]
          Length = 981

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYVGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 ENRGNKKELRMKSLRNSIRLLS 185


>ref|XP_017979490.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Theobroma
           cacao]
          Length = 971

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYIGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 EDRGNKKELRMKSLRNSIRLLS 185


>gb|EOY27495.1| Transducin/WD40 repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 971

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 43/82 (52%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKC-SALCCLKN-SAHSVIANLELGMESIERLV 74
           A+RAV+SIL  + GR++KD + R  ++EKC S L   KN S + +  N+ELG+ESI++LV
Sbjct: 104 AIRAVISILGGYIGRYIKDESFREMIKEKCNSCLVRRKNGSDNGIFVNMELGIESIDKLV 163

Query: 73  EGRGSSGELKIRSLRNAIRLLS 8
           E RG+  EL+++SLRN+IRLLS
Sbjct: 164 EDRGNKKELRMKSLRNSIRLLS 185


>gb|KQL28569.1| hypothetical protein SETIT_016202mg [Setaria italica]
          Length = 1006

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCLKNSA----------HSVIANLELG 98
           AV AVV++LSA+ GRFLKDA LR  LREKC+A     ++A           +V+ANLELG
Sbjct: 90  AVGAVVAVLSAYVGRFLKDAELRSGLREKCAACLAPASTAAAAAEDAAAGRAVLANLELG 149

Query: 97  MESIERLVEGRGSSGELKIRSLRNAIRLLS 8
           +ESIERL     +  + KIRSLRN+IRLLS
Sbjct: 150 IESIERLAADGAAPRDAKIRSLRNSIRLLS 179


>ref|XP_004951782.2| putative E3 ubiquitin-protein ligase LIN-1 [Setaria italica]
          Length = 1007

 Score = 82.8 bits (203), Expect = 6e-15
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
 Frame = -2

Query: 247 AVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCLKNSA----------HSVIANLELG 98
           AV AVV++LSA+ GRFLKDA LR  LREKC+A     ++A           +V+ANLELG
Sbjct: 91  AVGAVVAVLSAYVGRFLKDAELRSGLREKCAACLAPASTAAAAAEDAAAGRAVLANLELG 150

Query: 97  MESIERLVEGRGSSGELKIRSLRNAIRLLS 8
           +ESIERL     +  + KIRSLRN+IRLLS
Sbjct: 151 IESIERLAADGAAPRDAKIRSLRNSIRLLS 180


>ref|XP_015623592.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Oryza sativa
           Japonica Group]
          Length = 977

 Score = 82.4 bits (202), Expect = 8e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCL------KNSAHSVIANLELGMES 89
           AAV AVV++LS + GRF+KD   RR LREKC+A  CL      + + H+V+ANLELG+ES
Sbjct: 66  AAVGAVVAMLSGYVGRFVKDEGFRRGLREKCAA--CLAPAASRRGAGHAVLANLELGIES 123

Query: 88  IERLVEGRGSS----GELKIRSLRNAIRLLS 8
           IERL     S+     + KIRSLRN+IRLLS
Sbjct: 124 IERLAADAASAQAQQRDAKIRSLRNSIRLLS 154


>gb|EEC72569.1| hypothetical protein OsI_06007 [Oryza sativa Indica Group]
          Length = 977

 Score = 82.4 bits (202), Expect = 8e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
 Frame = -2

Query: 250 AAVRAVVSILSAHTGRFLKDAALRRRLREKCSALCCL------KNSAHSVIANLELGMES 89
           AAV AVV++LS + GRF+KD   RR LREKC+A  CL      + + H+V+ANLELG+ES
Sbjct: 66  AAVGAVVAMLSGYVGRFVKDEGFRRGLREKCAA--CLAPAASRRGAGHAVLANLELGIES 123

Query: 88  IERLVEGRGSS----GELKIRSLRNAIRLLS 8
           IERL     S+     + KIRSLRN+IRLLS
Sbjct: 124 IERLAADAASAQAQQRDAKIRSLRNSIRLLS 154