BLASTX nr result
ID: Ophiopogon24_contig00034269
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00034269
(593 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010520633.1| PREDICTED: uncharacterized protein LOC104799... 46 3e-13
gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium c... 49 4e-11
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu... 44 6e-11
ref|XP_020233683.1| craniofacial development protein 2-like [Caj... 44 7e-11
gb|AQK73740.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 8e-11
gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-10
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 46 4e-10
gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 8e-10
gb|AQK43450.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 43 1e-09
gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 2e-09
>ref|XP_010520633.1| PREDICTED: uncharacterized protein LOC104799692 [Tarenaya
hassleriana]
Length = 261
Score = 46.2 bits (108), Expect(4) = 3e-13
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +3
Query: 237 ETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
+TKWVGEKS I N +L Y+G+ RN N V I++D +ES+V K
Sbjct: 128 KTKWVGEKSKEIGNTSSRLWYSGQERNRNGVGIILDRSLKESVVAVK 174
Score = 33.5 bits (75), Expect(4) = 3e-13
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*-EEVTIFSAYALQVGL 465
K VGD I+L+KLVV E + + SAYA Q+GL
Sbjct: 174 KRVGDRIILVKLVVEGEAINVISAYAPQIGL 204
Score = 31.2 bits (69), Expect(4) = 3e-13
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYG 574
GDL+ VG D GY M+ GG GYG
Sbjct: 233 GDLNGHVGKDRQGYEMVHGGFGYG 256
Score = 30.8 bits (68), Expect(4) = 3e-13
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 95 GHIKNFRRGARYLCMRVEL---C*LLGKLSGKMIELVDTIINRKVN 223
G+ + +R+G L M ++ +G L+GK++ELVDT+ R+VN
Sbjct: 77 GNRQTYRKGDMKLSMERKVRVGTWNIGSLTGKLMELVDTMSRRRVN 122
>gb|PKU68428.1| hypothetical protein MA16_Dca021968 [Dendrobium catenatum]
Length = 410
Score = 48.9 bits (115), Expect(4) = 4e-11
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV 368
I+ ETKWVGEK+ I+++ FKL Y+G+SR N V +++D +++++
Sbjct: 90 ILCIQETKWVGEKAKEIDSLGFKLWYSGRSRTRNGVGVIIDKSLKDNVI 138
Score = 30.8 bits (68), Expect(4) = 4e-11
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK++EL+D +I+RK+N L
Sbjct: 69 IGSLTGKLMELIDIMIHRKLNIL 91
Score = 30.4 bits (67), Expect(4) = 4e-11
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 370 KQKTVGDIILLIKLVV*EE-VTIFSAYALQVGL 465
K +GD IL +K+VV ++ V I SAYA QVGL
Sbjct: 139 KINRIGDRILALKIVVDDKIVNIISAYAPQVGL 171
Score = 23.9 bits (50), Expect(4) = 4e-11
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYG 574
GDL+ VG + + + GGHG+G
Sbjct: 200 GDLNGHVGKEVVDFKSIHGGHGFG 223
>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 925
Score = 43.9 bits (102), Expect(4) = 6e-11
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 237 ETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
ETKW+GEK+ + + FKL YTGK R N V I+VD + + +V K
Sbjct: 96 ETKWIGEKAKELYSSGFKLWYTGKVRARNGVGIIVDKEWRKDVVEVK 142
Score = 30.0 bits (66), Expect(4) = 6e-11
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGV 577
GDL+ VG D+ GY GGHG GV
Sbjct: 201 GDLNGHVGGDSRGYEGFHGGHGLGV 225
Score = 29.6 bits (65), Expect(4) = 6e-11
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVN 223
+G L+GK +E+VDT+I R++N
Sbjct: 70 VGTLTGKAMEIVDTMIRRRIN 90
Score = 29.6 bits (65), Expect(4) = 6e-11
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEVT-IFSAYALQVGLFEY*K 480
K VGD I+ +KLV ++ T + SAYA Q+G E+ K
Sbjct: 142 KRVGDRIIALKLVARKDTTNVISAYAPQIGSEEHHK 177
>ref|XP_020233683.1| craniofacial development protein 2-like [Cajanus cajan]
Length = 311
Score = 43.9 bits (102), Expect(4) = 7e-11
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 237 ETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
ETKW+GEK+ + + FKL YTGK R N V I+VD + + +V K
Sbjct: 96 ETKWIGEKAKELYSSGFKLWYTGKVRARNGVGIIVDKEWRKDVVEVK 142
Score = 30.0 bits (66), Expect(4) = 7e-11
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGV 577
GDL+ VG D+ GY GGHG GV
Sbjct: 201 GDLNGHVGGDSRGYEGFHGGHGLGV 225
Score = 29.6 bits (65), Expect(4) = 7e-11
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVN 223
+G L+GK +E+VDT+I R++N
Sbjct: 70 VGTLTGKAMEIVDTMIRRRIN 90
Score = 29.6 bits (65), Expect(4) = 7e-11
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEVT-IFSAYALQVGLFEY*K 480
K VGD I+ +KLV ++ T + SAYA Q+G E+ K
Sbjct: 142 KRVGDRIIALKLVARKDTTNVISAYAPQIGSEEHHK 177
>gb|AQK73740.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 722
Score = 43.5 bits (101), Expect(4) = 8e-11
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 8e-11
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.3 bits (59), Expect(4) = 8e-11
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
Score = 26.6 bits (57), Expect(4) = 8e-11
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 497 FIGDLSELVG*DNGGYVMLQGGHGYGVK 580
FIGDL+ VG + + + GG G+G++
Sbjct: 228 FIGDLNGHVGTSSTSFEGVHGGFGFGIR 255
>gb|AQK43109.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 917
Score = 43.5 bits (101), Expect(4) = 2e-10
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 2e-10
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.3 bits (59), Expect(4) = 2e-10
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
Score = 25.4 bits (54), Expect(4) = 2e-10
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 497 FIGDLSELVG*DNGGYVMLQGGHGYGVK 580
FIGDL+ VG + + + GG G+G +
Sbjct: 228 FIGDLNGHVGTSSTSFEGVHGGFGFGTR 255
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 45.8 bits (107), Expect(4) = 4e-10
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKWVG K+ ++ FKL YTGK +N N V I+VD + ++ +V K
Sbjct: 527 IMCLQETKWVGAKARELDTSGFKLWYTGKVKNRNGVGIIVDKQWKKDVVDVK 578
Score = 29.6 bits (65), Expect(4) = 4e-10
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGV 577
GDL+ VG + GY + GGHG+GV
Sbjct: 637 GDLNGHVGREVTGYGSIHGGHGFGV 661
Score = 28.9 bits (63), Expect(4) = 4e-10
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVN 223
+G L+GK +E+VDT+ RK+N
Sbjct: 506 IGTLTGKSMEVVDTMTRRKIN 526
Score = 25.8 bits (55), Expect(4) = 4e-10
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV-*EEVTIFSAYALQVGLFEY*KRIF 489
K VGD I+ IKLVV + SAYA QVG E K F
Sbjct: 578 KRVGDRIISIKLVVEGGAFHVISAYAPQVGSDEQHKISF 616
>gb|ONM58670.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 933
Score = 43.5 bits (101), Expect(4) = 8e-10
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 8e-10
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 28.9 bits (63), Expect(4) = 8e-10
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD ++ R+VN L
Sbjct: 100 VGSLTGKLREIVDVVVRRRVNIL 122
Score = 21.6 bits (44), Expect(4) = 8e-10
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 231 GDLNGHVGTSSTSFEGVHGGFGFGTR 256
>gb|AQK43450.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 918
Score = 42.7 bits (99), Expect(4) = 1e-09
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 237 ETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 126 ETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 34.7 bits (78), Expect(4) = 1e-09
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+++KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIIIVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 30.8 bits (68), Expect(4) = 1e-09
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VNNL
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNNL 122
Score = 20.8 bits (42), Expect(4) = 1e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 231 GDLNGHVGTSSISFEGVHGGFGFGTR 256
>gb|ONL92524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.7 bits (60), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 IGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1038
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 121 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 172
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 172 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 210
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 100 VGSLTGKLREIVDVAVRRRVNIL 122
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 231 GDLNGHVGTSSTSFEGVHGGFGFGTR 256
>gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQL03708.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCIQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK84025.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234
>gb|AQK43188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTNFEGVHGGFGFGTR 234
>gb|ONM06616.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 1016
Score = 43.5 bits (101), Expect(4) = 2e-09
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 222 IIWSHETKWVGEKSWVIENIRFKLLYTGKSRNINRVRIVVDNKSEESIV*AK 377
I+ ETKW G+K+ +E FKL YTG + N N V +++D ++ +V K
Sbjct: 99 ILCVQETKWKGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVK 150
Score = 35.4 bits (80), Expect(4) = 2e-09
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 376 KTVGDIILLIKLVV*EEV-TIFSAYALQVGLFEY*KRIF 489
K VGD I+L+KLV+ + V + SAYA QVGL E KR F
Sbjct: 150 KRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREF 188
Score = 27.3 bits (59), Expect(4) = 2e-09
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 LGKLSGKMIELVDTIINRKVNNL 229
+G L+GK+ E+VD + R+VN L
Sbjct: 78 VGSLTGKLREIVDVAVRRRVNIL 100
Score = 21.6 bits (44), Expect(4) = 2e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 503 GDLSELVG*DNGGYVMLQGGHGYGVK 580
GDL+ VG + + + GG G+G +
Sbjct: 209 GDLNGHVGTSSTSFEGVHGGFGFGTR 234