BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00033380
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY70170.1| putative ribonuclease H protein [Ananas comosus]        59   9e-08
ref|XP_020086093.1| uncharacterized protein LOC109708688 [Ananas...    60   9e-08
gb|PNT61791.1| hypothetical protein BRADI_5g20757v3 [Brachypodiu...    57   9e-07
gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]        57   1e-06

>gb|OAY70170.1| putative ribonuclease H protein [Ananas comosus]
          Length = 220

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
 Frame = -2

Query: 388 WKWDRT*AFTVKSANRVLREG-I*KGLVTKVWHIKCPLKVRI-----LPESYFDLG*PLK 227
           W+W  +  F+VKSA R+L +G    G  +K+W ++ PLKV++     L +        +K
Sbjct: 83  WRWCSSGIFSVKSAYRMLNDGGTIDGRTSKIWRLRIPLKVKVFCWLVLKKRPLTTDNLVK 142

Query: 226 TRVGGPNICTLCRRNEKTINHLFFDCAFLRSI 131
               G   C LCR +++T++HLF  C FL+ I
Sbjct: 143 RWWTGETACVLCRDHDETVDHLFTQCVFLKYI 174


>ref|XP_020086093.1| uncharacterized protein LOC109708688 [Ananas comosus]
          Length = 1589

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
 Frame = -2

Query: 388  WKWDRT*AFTVKSA-NRVLREGI*KGLVTKVWHIKCPLKVRILP-----ESYFDLG*PLK 227
            W+W     F V+ A N ++ +G+    +  +W IK PL+V+I                 K
Sbjct: 1409 WRWHADGRFQVRRAYNFLIYDGVNTNYIPCLWTIKIPLRVKIFMWLAARNKILTADTLAK 1468

Query: 226  TRVGGPNICTLCRRNEKTINHLFFDCAFLRSIWADNRNRH----------SGFISP--NN 83
                GP+ICTLC R+ +++ H+FF C++  ++W +    H           G +    N 
Sbjct: 1469 RGWVGPSICTLCSRSGESLQHIFFYCSYSTTVWTNLLQHHLTTQRALLALPGDLPTRWNR 1528

Query: 82   YEDMLGGHLARRGLFSVAIAAVCWCVW 2
                + G   RRG F   +  +CW +W
Sbjct: 1529 ARISIKGRRHRRG-FDTLLTTICWELW 1554


>gb|PNT61791.1| hypothetical protein BRADI_5g20757v3 [Brachypodium distachyon]
          Length = 436

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
 Frame = -2

Query: 394 PVWKWDRT*AFTVKSANRVLREGI*KGLVTKVWHIKCPLKVRILPESYFDLG*PLKTRV- 218
           PVWKW+++  F+VKS    L           +W  K PLK++I     +      K  + 
Sbjct: 216 PVWKWEKSGKFSVKSIYTHLSSNGIDRSFKHLWKAKIPLKIKIWLWLIWHNAIATKDNMK 275

Query: 217 ----GGPNICTLCRRNEKTINHLFFDCAFLRSIWADNRNRHSGFISP---NNYEDMLGGH 59
                G   C  C   E TI HLFF C+ +  +W    N       P   + Y   +  H
Sbjct: 276 KRQWEGDTKCRFCHEKE-TIGHLFFTCSAVAYVWGTVTNTLGATTRPGCFSQYFWWITQH 334

Query: 58  LA-RRGLFSVAIAAVCWCVW 2
            A  R +    +AA+CW +W
Sbjct: 335 SAFSRNVQIAGLAAICWAIW 354


>gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]
          Length = 244

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
 Frame = -2

Query: 400 WTPVWKWDRT*AFTVKSANRVLR-EGI*KGLVTKVWHIKCPLKVRIL-----PESYFDLG 239
           ++P W+W  +  F+V+SA   L  +GI    +  +W +K PL+++I              
Sbjct: 113 YSPSWRWTNSSTFSVRSAYAFLSFDGITNSKIAFLWKLKIPLRIKIFLWLAARNKLLTTC 172

Query: 238 *PLKTRVGGPNICTLCRRNEKTINHLFFDCAFLRSIW 128
              K    GP+IC LC  + +TI+HL F C F R  W
Sbjct: 173 FLAKRGWQGPSICVLCYFDAETIDHLLFLCPFARDFW 209