BLASTX nr result

ID: Ophiopogon24_contig00033115 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00033115
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officin...    59   3e-15
gb|ONK57058.1| uncharacterized protein A4U43_C10F16180 [Asparagu...    61   8e-14
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     53   6e-13
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     53   6e-13
gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officin...    62   1e-08
ref|XP_020266363.1| uncharacterized protein LOC109841837 [Aspara...    62   1e-08

>gb|ABD63154.1| hypothetical protein 20.t00006 [Asparagus officinalis]
          Length = 851

 Score = 59.3 bits (142), Expect(2) = 3e-15
 Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +1

Query: 136 NLLRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSVPL-GIVPIPKGKLKLINADPHAQ 312
           ++L+ LV+A VL LKPE++ V+ N +++QFG+  P V   G++PI KG++ L N DPH+Q
Sbjct: 675 DILQNLVNANVLTLKPEQKTVSTNMIAVQFGDFPPVVTANGVIPIRKGEMHLKNVDPHSQ 734

Query: 313 WTR 321
             R
Sbjct: 735 KDR 737



 Score = 50.1 bits (118), Expect(2) = 3e-15
 Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
 Frame = +3

Query: 300 PTRPMDKGLVPITTH-GEVMWVHPDFVGDQQWTT 398
           P    D+GLVP+TT  GE+MWVHPD + DQQWT+
Sbjct: 731 PHSQKDRGLVPLTTQKGEIMWVHPDLLRDQQWTS 764


>gb|ONK57058.1| uncharacterized protein A4U43_C10F16180 [Asparagus officinalis]
          Length = 190

 Score = 61.2 bits (147), Expect(2) = 8e-14
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = +1

Query: 142 LRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSV--PLGIVPIPKGKLKLINADPHAQ 312
           L+AL DA VLK +  +++VT N ++L FG +LP V  P G++PIPK  LK+ N DPH Q
Sbjct: 23  LQALYDAGVLKKEKVQKQVTTNMITLSFGTNLPEVQAPAGVIPIPKAVLKITNDDPHNQ 81



 Score = 43.1 bits (100), Expect(2) = 8e-14
 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 300 PTRPMDKGLVPITT-HGEVMWVHPDFVGDQQWT 395
           P    +KGLVP T   G+VMWVHPD + D+QWT
Sbjct: 78  PHNQREKGLVPQTLPDGQVMWVHPDLLHDEQWT 110


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 53.1 bits (126), Expect(2) = 6e-13
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = +1

Query: 136  NLLRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSVPL--GIVPIPKGKLKLINADPHA 309
            ++L+ LV+A VL LKPE++ V+ N +++QFG D P V    G++P+ KG++ L N D H 
Sbjct: 1688 DILQNLVNANVLTLKPEQKTVSTNLIAVQFG-DFPPVAAADGVIPVRKGEMHLKNTDLHN 1746

Query: 310  QWTR 321
            Q  R
Sbjct: 1747 QKDR 1750



 Score = 48.1 bits (113), Expect(2) = 6e-13
 Identities = 20/28 (71%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
 Frame = +3

Query: 315  DKGLVPIT-THGEVMWVHPDFVGDQQWT 395
            D+GLVP+T + GE+MWVHPD V DQQWT
Sbjct: 1749 DRGLVPLTISKGEIMWVHPDLVEDQQWT 1776


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 53.1 bits (126), Expect(2) = 6e-13
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = +1

Query: 136  NLLRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSVPL--GIVPIPKGKLKLINADPHA 309
            ++L+ LV+A VL LKPE++ V+ N +++QFG D P V    G++P+ KG++ L N D H 
Sbjct: 826  DILQNLVNANVLTLKPEQKTVSTNLIAVQFG-DFPPVAAADGVIPVRKGEMHLKNTDLHN 884

Query: 310  QWTR 321
            Q  R
Sbjct: 885  QKDR 888



 Score = 48.1 bits (113), Expect(2) = 6e-13
 Identities = 20/28 (71%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
 Frame = +3

Query: 315 DKGLVPIT-THGEVMWVHPDFVGDQQWT 395
           D+GLVP+T + GE+MWVHPD V DQQWT
Sbjct: 887 DRGLVPLTISKGEIMWVHPDLVEDQQWT 914


>gb|ABD63171.1| hypothetical protein 20.t00023 [Asparagus officinalis]
          Length = 403

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 142 LRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSV--PLGIVPIPKGKLKLINADPHAQ 312
           L+ L D  VLK +  +++VT N V L FG DLP V  P G+VPIPK  LK+ NADPH Q
Sbjct: 117 LQTLYDVGVLKKEKVQKKVTTNMVILSFGTDLPEVHAPTGVVPIPKAVLKITNADPHNQ 175


>ref|XP_020266363.1| uncharacterized protein LOC109841837 [Asparagus officinalis]
          Length = 406

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = +1

Query: 142 LRALVDAQVLKLKPEERRVTNNAVSLQFGEDLPSV--PLGIVPIPKGKLKLINADPHAQ 312
           L+AL DA VLK +   ++VT N V+L FG DL  V  P GIVPIPK  LK+IN DPH Q
Sbjct: 335 LQALYDAGVLKKEKVHKQVTTNMVTLSFGRDLLEVQAPTGIVPIPKAMLKIINDDPHNQ 393


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