BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00033055
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266915.1| LOW QUALITY PROTEIN: pentatricopeptide repea...    74   2e-12
ref|XP_010924115.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-11
ref|XP_017698876.1| PREDICTED: pentatricopeptide repeat-containi...    62   3e-08
ref|XP_011084656.1| pentatricopeptide repeat-containing protein ...    60   1e-07
ref|XP_008365381.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
gb|PIA29307.1| hypothetical protein AQUCO_06100077v1, partial [A...    59   2e-07
ref|XP_009400508.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-07
gb|EPS58656.1| hypothetical protein M569_16158, partial [Genlise...    58   4e-07
ref|XP_009334116.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07
gb|KZV34656.1| pentatricopeptide repeat-containing protein-like ...    57   9e-07
ref|XP_011011828.1| PREDICTED: pentatricopeptide repeat-containi...    57   9e-07
gb|PKA65283.1| Pentatricopeptide repeat-containing protein [Apos...    57   2e-06
ref|XP_002324003.1| hypothetical protein POPTR_0017s10790g [Popu...    57   2e-06
ref|XP_012834815.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_020705824.1| pentatricopeptide repeat-containing protein ...    56   2e-06
ref|XP_016709222.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_020584978.1| pentatricopeptide repeat-containing protein ...    55   4e-06
emb|CBI15512.3| unnamed protein product, partial [Vitis vinifera]      55   4e-06
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]    55   4e-06
ref|XP_010663648.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06

>ref|XP_020266915.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
           At5g40400 [Asparagus officinalis]
          Length = 585

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
 Frame = +3

Query: 24  THSLHP----HTIFKGLLNYSLHATNFPKVPFLFPKHNFSYSMPISAFSSNSQPLHTAPI 191
           T SLHP      +   LL++SL ++           H FS  +      ++    H  P+
Sbjct: 79  TSSLHPLPCPPPLNLSLLSHSLSSSRL---------HAFSLXLAHRLLLTHP---HIDPL 126

Query: 192 S-LLDSSHATNSS-AAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLL 365
           S LL SS  + SS + F LL+ A L LGQ+  AV TLRRL  +G  P+ H+FN VL  L+
Sbjct: 127 SSLLSSSQLSCSSPSVFGLLVNAQLRLGQLSAAVETLRRLTRLGLPPNSHTFNSVLRGLV 186

Query: 366 STTTAADNLHLCWDIYNTMRSAG 434
            +     NL LCW+IY+ M+ AG
Sbjct: 187 KSRMKG-NLDLCWEIYDEMKRAG 208


>ref|XP_010924115.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Elaeis guineensis]
 ref|XP_010924116.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Elaeis guineensis]
 ref|XP_019706957.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Elaeis guineensis]
          Length = 632

 Score = 69.3 bits (168), Expect = 7e-11
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +3

Query: 126 FSYSMPISAFSSNSQPLHTAPISLLDSSHATNS--SAAFDLLIKAHLHLGQIRPAVRTLR 299
           FS+++ I A    + P   A  +L+ SS A  +   A F +L+K  + LG+I  A+ T R
Sbjct: 159 FSHALQILAQLLQTHPHLDAFQALVASSAAGCNWDPAVFGMLVKVQVKLGRIADALDTCR 218

Query: 300 RLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIYNTMRSAG 434
           R IH+GF P  ++FNC+LNSL+     ++ L  CWD+Y  MR  G
Sbjct: 219 RAIHLGFAPDANAFNCLLNSLV----RSNRLGRCWDVYGEMRRIG 259


>ref|XP_017698876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Phoenix dactylifera]
          Length = 632

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = +3

Query: 126 FSYSMPISAFSSNSQPLHTAPISLLDSSHATNS--SAAFDLLIKAHLHLGQIRPAVRTLR 299
           FS+++ I A    + P   A  +++ +S A  +   A F +L+K  + LG+I  A+ T R
Sbjct: 159 FSHALEILAQLLQTHPHLDAFQAVVAASAAGCNWDPAVFGMLVKVQVKLGRIVDALDTCR 218

Query: 300 RLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIYNTMRSAG 434
           R + +GF P  ++FNC+LNSL+     A+ L  CW++Y  MR  G
Sbjct: 219 RAVDLGFAPDANAFNCLLNSLV----RANRLGHCWEVYGEMRRIG 259


>ref|XP_011084656.1| pentatricopeptide repeat-containing protein At5g40400 [Sesamum
           indicum]
          Length = 626

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +3

Query: 165 SQPLHTAPISLLDSSHATNSSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFN 344
           S+ L+     +L ++      A FD+LIKA+L  G ++ + RT R++I  GF+PS  + N
Sbjct: 161 SERLNVYESLILSTNDCNWDPAVFDMLIKAYLRKGMVKESFRTFRKIIRAGFVPSIVTIN 220

Query: 345 CVLNSLLSTTTAADNLHLCWDIYNTMR 425
           C+LN L    +  D    CW++Y  MR
Sbjct: 221 CLLNGL----SRMDFGGKCWEVYEEMR 243


>ref|XP_008365381.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Malus domestica]
          Length = 639

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+LIKA++  G IR  + T R+++ +GF+PS  S NC+LN L+      + +  CWD+Y
Sbjct: 198 FDMLIKAYVKAGMIRDGLSTFRKIVEVGFVPSVVSCNCLLNGLVK----LNRIDQCWDVY 253

Query: 414 NTMRSAG 434
             M   G
Sbjct: 254 EEMGRIG 260


>gb|PIA29307.1| hypothetical protein AQUCO_06100077v1, partial [Aquilegia coerulea]
          Length = 618

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = +3

Query: 222 SSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLC 401
           S   FD+LIKA++ +G+I   ++  +++I IGF+P   + NC+LN LL +      L LC
Sbjct: 172 SPIVFDMLIKAYVKMGKIEEGLKAFKKMIKIGFVPDVSACNCLLNGLLRSNC----LDLC 227

Query: 402 WDIYNTM 422
           W+IY+ M
Sbjct: 228 WEIYDEM 234


>ref|XP_009400508.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = +3

Query: 228 AAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWD 407
           A F +L+K +  LG+   A+ T  R I +G  P   +FNC+LNSL  +     +L LCWD
Sbjct: 224 AVFGMLVKVYTKLGRTSDALETFSRAIELGLAPDAEAFNCLLNSLAKSR----SLDLCWD 279

Query: 408 IYNTMRSAG 434
           +Y  MR  G
Sbjct: 280 LYGEMRRIG 288


>gb|EPS58656.1| hypothetical protein M569_16158, partial [Genlisea aurea]
          Length = 246

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 30/80 (37%), Positives = 45/80 (56%)
 Frame = +3

Query: 195 LLDSSHATNSSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTT 374
           LL + +  + +A FD+LIKA+L  G I+   +T RR++ +GFLP        +N LLS+ 
Sbjct: 137 LLSAENCNSDAAVFDMLIKAYLMKGMIKEGFQTFRRMVKLGFLPD----LVAVNRLLSSL 192

Query: 375 TAADNLHLCWDIYNTMRSAG 434
           + A+    CW IY  M   G
Sbjct: 193 SKANRSAKCWRIYGVMIEIG 212


>ref|XP_009334116.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Pyrus x bretschneideri]
          Length = 638

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+LIKA++  G IR  + T R++++ GF+PS  S NC+LN L+      + +  CWD+Y
Sbjct: 197 FDMLIKAYVKAGMIRGGLSTFRKIVNDGFVPSVVSCNCLLNGLVK----LNRIDQCWDVY 252

Query: 414 NTMRSAG 434
             M   G
Sbjct: 253 EEMGRIG 259


>gb|KZV34656.1| pentatricopeptide repeat-containing protein-like [Dorcoceras
           hygrometricum]
          Length = 522

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +3

Query: 192 SLLDSSHATN-SSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLS 368
           +LL  S+  N      D+LIKA+L  G +  + R  R+++ +GF+PS  + NC+LN L  
Sbjct: 163 NLLSCSNECNWDPVVLDMLIKAYLKKGMVEESFRAFRKMLKLGFVPSLITVNCLLNGL-- 220

Query: 369 TTTAADNLHLCWDIYNTMRSAG 434
             +  D    CWD+YN +++ G
Sbjct: 221 --SVIDCGEKCWDVYNMLQNIG 240


>ref|XP_011011828.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Populus euphratica]
          Length = 626

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 25/67 (37%), Positives = 43/67 (64%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FDLL+KA++ +G I+   RT  +++ +G++PS  + N +LN LL     ++++HLCW +Y
Sbjct: 185 FDLLLKAYVKVGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLK----SNHIHLCWHVY 240

Query: 414 NTMRSAG 434
             M   G
Sbjct: 241 GEMGRVG 247


>gb|PKA65283.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 600

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
 Frame = +3

Query: 15  LYLTHSLHPHTIFKGLLNYSLHATNFPKVPF-LFPKHNFSYSMPIS-AFSSNSQPLHTAP 188
           L+  H L P      LL ++L  T+F      L     F  + P+S  FSS    L ++ 
Sbjct: 89  LHARHHLTPSPYHFSLLAHAL--TSFGLFSHCLSTLSRFILTHPVSDPFSS----LLSSA 142

Query: 189 ISLLDSSHATNSSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLS 368
           +S   + H T     F LLIKA L  G +R ++   RR +H GF P   + N +LNSL  
Sbjct: 143 VSGQCNWHPT----VFSLLIKAFLDHGMLRQSLDAFRRTLHAGFAPDAFTSNSLLNSL-- 196

Query: 369 TTTAADNLHLCWDIYNTMRSAG 434
               +  L LCW++Y +M+ AG
Sbjct: 197 --AKSGELDLCWEVYASMKEAG 216


>ref|XP_002324003.1| hypothetical protein POPTR_0017s10790g [Populus trichocarpa]
 gb|PNS95665.1| hypothetical protein POPTR_017G071600v3 [Populus trichocarpa]
          Length = 626

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/67 (37%), Positives = 42/67 (62%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FDLL+KA++  G I+   RT  +++ +G++PS  + N +LN LL     ++++HLCW +Y
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLK----SNHIHLCWHVY 240

Query: 414 NTMRSAG 434
             M   G
Sbjct: 241 GEMGRVG 247


>ref|XP_012834815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Erythranthe guttata]
          Length = 635

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+LIKA+L  G ++ + R     + +GFLPS  + NC+LN L    +  D +  CW+IY
Sbjct: 194 FDMLIKAYLRKGMVKESFRAFEETVKLGFLPSIFTVNCLLNGL----SKMDYVEKCWEIY 249

Query: 414 NTMR 425
             MR
Sbjct: 250 EEMR 253


>ref|XP_020705824.1| pentatricopeptide repeat-containing protein At5g40400 [Dendrobium
           catenatum]
 gb|PKU61915.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 590

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 40/70 (57%)
 Frame = +3

Query: 225 SAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCW 404
           SA F LL+ A+LHLG +R A+    R I+ GF P   + N +LNSL      + +   CW
Sbjct: 151 SAVFSLLVTAYLHLGFLRQALDAFHRSINAGFPPDAITSNSLLNSL----AKSGDFDSCW 206

Query: 405 DIYNTMRSAG 434
           ++Y  MR AG
Sbjct: 207 EVYTAMRKAG 216


>ref|XP_016709222.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Gossypium hirsutum]
          Length = 543

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
 Frame = +3

Query: 33  LHPHTI-FKGLLNYSLHATNF-----PKVPFLFPKHNFSYSMPISAFSSNSQPLHTAPIS 194
           LHP  + FK L   S++   F       +      HN+ Y + I A+S N          
Sbjct: 11  LHPQLLHFKPLKTLSVNRLTFFNWVKNDLGMKLSSHNYCYIVHILAWSKNFSLAMNLLCE 70

Query: 195 LLD------------------SSHATNSSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGF 320
           L+D                  S      +  FD+LIK ++  G ++  +RT   ++ +G+
Sbjct: 71  LIDFVKDCSNCEDLFESLVSCSKDCNFDAVVFDMLIKGYVRKGMVKEGMRTFTNILEVGY 130

Query: 321 LPSPHSFNCVLNSLLSTTTAADNLHLCWDIYNTMRSAG 434
           LPS  + NC+LN LL      + +  CW +Y  M   G
Sbjct: 131 LPSVITCNCLLNGLL----RLNFIDQCWLVYEEMGRVG 164


>ref|XP_020584978.1| pentatricopeptide repeat-containing protein At5g40400 [Phalaenopsis
           equestris]
          Length = 608

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
 Frame = +3

Query: 30  SLHPHTIFKG--LLNYSLHATNFPKVPFLFPKHNFSYSMPISAFSS------NSQPLHTA 185
           SLH  + F+   LL  S H          F +H   +S+ +S   S       S P  + 
Sbjct: 100 SLHLLSFFQSRHLLTPSPHHFALLAHSLTFSRH---FSLSLSTLRSLILTHPTSDPFSSL 156

Query: 186 PISLLDSSHATNSSAAFDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLL 365
            +S   S      SA F LL+  +LHLG +R A+    R ++ GF P   + N ++NSL 
Sbjct: 157 -LSSASSGRCNFHSAVFSLLVTTYLHLGFLRQALDAFYRSVNAGFPPDAVTSNSLINSL- 214

Query: 366 STTTAADNLHLCWDIYNTMRSAG 434
                A     CW++Y  MR+AG
Sbjct: 215 ---AKAGEFDGCWEVYTAMRNAG 234


>emb|CBI15512.3| unnamed protein product, partial [Vitis vinifera]
          Length = 660

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 42/67 (62%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+L+KA+L +G++R  +R+ RR++ +GF+P+  + N +LN LL      +    CW++Y
Sbjct: 191 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLK----LNYTDRCWEVY 246

Query: 414 NTMRSAG 434
             M   G
Sbjct: 247 EEMERFG 253


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 42/67 (62%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+L+KA+L +G++R  +R+ RR++ +GF+P+  + N +LN LL      +    CW++Y
Sbjct: 236 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLK----LNYTDRCWEVY 291

Query: 414 NTMRSAG 434
             M   G
Sbjct: 292 EEMERFG 298


>ref|XP_010663648.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
 ref|XP_010663649.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
 ref|XP_019082060.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
 ref|XP_019082061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
 ref|XP_019082062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
 ref|XP_019082063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40400
           [Vitis vinifera]
          Length = 677

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 42/67 (62%)
 Frame = +3

Query: 234 FDLLIKAHLHLGQIRPAVRTLRRLIHIGFLPSPHSFNCVLNSLLSTTTAADNLHLCWDIY 413
           FD+L+KA+L +G++R  +R+ RR++ +GF+P+  + N +LN LL      +    CW++Y
Sbjct: 237 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLK----LNYTDRCWEVY 292

Query: 414 NTMRSAG 434
             M   G
Sbjct: 293 EEMERFG 299