BLASTX nr result

ID: Ophiopogon24_contig00032664 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00032664
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014342002.1| PREDICTED: polyhomeotic-like protein 3 [Lati...    55   5e-06
ref|XP_012661527.1| mitogen-activated protein kinase 7 [Otolemur...    54   7e-06

>ref|XP_014342002.1| PREDICTED: polyhomeotic-like protein 3 [Latimeria chalumnae]
          Length = 969

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
 Frame = -3

Query: 347 PTAAAAGLRPGRQPPV---PATAQSPCHQPPLASPAGPAPQPDHRCSA*TPAALDRP-AF 180
           P+ A + + P   PPV   P+ A SP H PP+      +PQP H   +  PA + +P A 
Sbjct: 354 PSLAPSSVPPQHCPPVQIHPSLAPSPTHSPPVQQTVVVSPQPTHSPPSQPPAIIIQPHAL 413

Query: 179 TSSPIRPGPASHRPTKIRTTPSSAPLQSSTAGGLHCRSP 63
            +SP+  G   H+P+ I+T+ S  P       GL C  P
Sbjct: 414 IASPLPLGSNQHQPSAIQTSSSQQP-------GLPCHLP 445


>ref|XP_012661527.1| mitogen-activated protein kinase 7 [Otolemur garnettii]
          Length = 810

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 44/121 (36%), Positives = 46/121 (38%), Gaps = 19/121 (15%)
 Frame = -3

Query: 311 QPPVPATAQSPCHQPPL-----------ASPAGPAPQPDHRCSA*TPAALDRPAFTSSPI 165
           QPP PA A  P   PPL           A P GP PQP    S   P     P       
Sbjct: 577 QPPAPAPAPVPAPTPPLRQPTSPPPGSVAKPVGPPPQPADSTSGPAPEPACPP------- 629

Query: 164 RPGPASHRPTKIRTTPSSAPLQSSTAGGLHCRS----PGWKPGSS----LLRLPSDPPMP 9
            PGP SH        P  APLQ++T   L        P   PGSS    L   PS PP P
Sbjct: 630 -PGPPSHATGPSGAMPVPAPLQTATTTSLLAPQPLVPPPGLPGSSAPGILPYFPSGPPPP 688

Query: 8   D 6
           D
Sbjct: 689 D 689


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