BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00032519
         (510 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum]    134   1e-35
ref|XP_011074352.1| polyadenylation and cleavage factor homolog ...   140   3e-35
ref|XP_011074351.1| polyadenylation and cleavage factor homolog ...   140   3e-35
ref|XP_011074350.1| polyadenylation and cleavage factor homolog ...   140   3e-35
gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina]   138   1e-34
gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II com...   138   1e-34
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact...   135   1e-33
ref|XP_021719658.1| polyadenylation and cleavage factor homolog ...   134   3e-33
ref|XP_021766922.1| polyadenylation and cleavage factor homolog ...   134   3e-33
gb|OWM83489.1| hypothetical protein CDL15_Pgr012970 [Punica gran...   134   4e-33
ref|XP_015938301.1| polyadenylation and cleavage factor homolog ...   124   6e-33
ref|XP_022036926.1| polyadenylation and cleavage factor homolog ...   133   6e-33
ref|XP_016173485.1| polyadenylation and cleavage factor homolog ...   124   1e-32
ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage fact...   132   1e-32
ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage fact...   132   2e-32
gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium bar...   132   2e-32
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r...   132   2e-32
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact...   132   2e-32
gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium bar...   132   2e-32
ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage fact...   132   2e-32

>gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum]
          Length = 257

 Score =  134 bits (336), Expect = 1e-35
 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 9/175 (5%)
 Frame = -3

Query: 508 PNPNPN-------PMKRDREKFEARPALRDRFDA--KVEEMKQRGPVGTSEITSLFGDFL 356
           P PNP        PM  +    +A P++ DRF A  K+ + +   P G+ EI  ++   L
Sbjct: 11  PRPNPRNLPPFLKPMPAELPPQKAPPSILDRFRALLKLRDDEGLSPPGSDEIVRIYESML 70

Query: 355 LELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGD 176
            ELT NSKP+I +LT IA + K + +GIA+AI  RI+E PV+QKLPS YLLDSI+KN+G 
Sbjct: 71  TELTFNSKPIITDLTIIAGEQKANGEGIADAICARIIEAPVDQKLPSLYLLDSIVKNIGK 130

Query: 175 QYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           +Y  +F+ RL  +F + Y+++ P +  +M HLF TW  Y P      IE  L+ S
Sbjct: 131 EYVRHFSSRLPEVFCEAYRQVDPSMYGSMRHLFGTWSTYFPPQVLRKIETELRFS 185


>ref|XP_011074352.1| polyadenylation and cleavage factor homolog 4 isoform X3 [Sesamum
           indicum]
          Length = 940

 Score =  140 bits (352), Expect = 3e-35
 Identities = 74/154 (48%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
 Frame = -3

Query: 454 PALRDRFDAKVEEMKQR------GPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKY 293
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 292 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 113
           + H +GIA+AI  RI+EVP++QKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y ++
Sbjct: 96  RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155

Query: 112 SPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
            P +  AM HLF TW    PS    +IE  LQ S
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFS 189


>ref|XP_011074351.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Sesamum
           indicum]
          Length = 964

 Score =  140 bits (352), Expect = 3e-35
 Identities = 74/154 (48%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
 Frame = -3

Query: 454 PALRDRFDAKVEEMKQR------GPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKY 293
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 292 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 113
           + H +GIA+AI  RI+EVP++QKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y ++
Sbjct: 96  RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155

Query: 112 SPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
            P +  AM HLF TW    PS    +IE  LQ S
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFS 189


>ref|XP_011074350.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Sesamum
           indicum]
          Length = 967

 Score =  140 bits (352), Expect = 3e-35
 Identities = 74/154 (48%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
 Frame = -3

Query: 454 PALRDRFDAKVEEMKQR------GPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKY 293
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 292 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 113
           + H +GIA+AI  RI+EVP++QKLPS YLLDSI+KN+G +Y  YF+ RL  +F + Y ++
Sbjct: 96  RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155

Query: 112 SPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
            P +  AM HLF TW    PS    +IE  LQ S
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFS 189


>gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina]
          Length = 862

 Score =  138 bits (348), Expect = 1e-34
 Identities = 74/147 (50%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 448 LRDRFDAKVEEMKQR-GPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGI 272
           L DRF   ++E ++  G V   EI +L+ DFL EL  NSKP+I ELT IA + + H  GI
Sbjct: 16  LLDRFRETIKEKEEEFGVVDGDEIVALYEDFLEELILNSKPIITELTIIAGEQRQHARGI 75

Query: 271 ANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPA 92
           A AI  RI+EVPVE+KLPS YLLDSI+KN+G +Y   FA R+  +F + Y  ++P LRP+
Sbjct: 76  AEAICSRIIEVPVEKKLPSLYLLDSIVKNIGTEYVRCFAARIPEVFCEAYNHVNPNLRPS 135

Query: 91  MVHLFRTWGKYIPSFARDSIEEFLQKS 11
           M HLF TW +  PS   + IE  LQ S
Sbjct: 136 MRHLFGTWSQVFPSPVLEKIENELQFS 162


>gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II complex, subunit
           Pcf11 [Handroanthus impetiginosus]
          Length = 940

 Score =  138 bits (347), Expect = 1e-34
 Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 10/172 (5%)
 Frame = -3

Query: 496 PNPMKRDREKFEARPAL-RDRFDAKVEEMKQ------RG---PVGTSEITSLFGDFLLEL 347
           P P++ D    +  P L  DRF A V+E ++      RG   P+ T EI  L+   L EL
Sbjct: 21  PPPIQNDGVGMKPLPPLILDRFRAMVKEREEELRVFGRGAVLPLNTDEIVRLYEIMLSEL 80

Query: 346 TRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYR 167
           T NSKP+I +LT IA + + H +GIA+AI  RI+EVPV+QKLPS YLLDSI+KN+G  Y 
Sbjct: 81  TINSKPIITDLTIIAGEQRAHAEGIADAICARIIEVPVDQKLPSLYLLDSIVKNIGKDYV 140

Query: 166 LYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
            YF+ RL  +F + Y ++ P + PAM HLF TW    PS     IE  L++S
Sbjct: 141 RYFSARLPEVFCEAYAQVHPNMHPAMRHLFGTWSAVFPSSVLQKIEAQLKRS 192


>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score =  135 bits (340), Expect = 1e-33
 Identities = 76/154 (49%), Positives = 97/154 (62%)
 Frame = -3

Query: 472 EKFEARPALRDRFDAKVEEMKQRGPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKY 293
           EKF A    R+  + +V +     P  T EI  L+   L ELT NSKP+I ELT IA + 
Sbjct: 51  EKFRALLKEREE-EMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQ 109

Query: 292 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 113
           ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YFA RL  +F + Y+++
Sbjct: 110 REHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQV 169

Query: 112 SPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
            P L PAM HLF TW    P+     IE  LQ S
Sbjct: 170 QPNLYPAMRHLFGTWSTVFPTKVLRKIEVELQFS 203


>ref|XP_021719658.1| polyadenylation and cleavage factor homolog 4-like [Chenopodium
           quinoa]
          Length = 938

 Score =  134 bits (337), Expect = 3e-33
 Identities = 65/130 (50%), Positives = 90/130 (69%)
 Frame = -3

Query: 400 PVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 221
           P   +EI + + D L ELT NSKP+I +LT IA + ++H +GIA+AI  R++EVPV+QK+
Sbjct: 45  PPSMAEIVTFYEDVLSELTFNSKPIITDLTIIAGEQREHAEGIADAICARVLEVPVDQKM 104

Query: 220 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFAR 41
           PS YLLDSI+KN+G +Y  +FA RL  +F + Y+++ P L P+M HLFRTW    PS   
Sbjct: 105 PSLYLLDSIVKNIGREYARHFASRLPEVFCEVYRQVPPNLYPSMRHLFRTWSTVFPSLVL 164

Query: 40  DSIEEFLQKS 11
             IE+ LQ S
Sbjct: 165 SMIEDELQFS 174


>ref|XP_021766922.1| polyadenylation and cleavage factor homolog 4-like [Chenopodium
           quinoa]
          Length = 939

 Score =  134 bits (337), Expect = 3e-33
 Identities = 65/130 (50%), Positives = 91/130 (70%)
 Frame = -3

Query: 400 PVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 221
           P   +EI + + D L ELT NSKP+I +LT IA + ++H +GIA+AI  R++EVPV+QK+
Sbjct: 45  PPSMAEIVTFYEDVLSELTFNSKPIITDLTIIAGEQREHAEGIADAICARVLEVPVDQKM 104

Query: 220 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFAR 41
           PS YLLDSI+KN+G +Y  +FA RL  +F + Y+++ P L P+M HLFRTW    PS   
Sbjct: 105 PSLYLLDSIVKNIGREYARHFASRLPEVFCEVYRQVPPNLYPSMRHLFRTWSTVFPSSVL 164

Query: 40  DSIEEFLQKS 11
            +IE+ LQ S
Sbjct: 165 STIEDELQFS 174


>gb|OWM83489.1| hypothetical protein CDL15_Pgr012970 [Punica granatum]
          Length = 943

 Score =  134 bits (336), Expect = 4e-33
 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 9/175 (5%)
 Frame = -3

Query: 508 PNPNPN-------PMKRDREKFEARPALRDRFDA--KVEEMKQRGPVGTSEITSLFGDFL 356
           P PNP        PM  +    +A P++ DRF A  K+ + +   P G+ EI  ++   L
Sbjct: 11  PRPNPRNLPPFLKPMPAELPPQKAPPSILDRFRALLKLRDDEGLSPPGSDEIVRIYESML 70

Query: 355 LELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGD 176
            ELT NSKP+I +LT IA + K + +GIA+AI  RI+E PV+QKLPS YLLDSI+KN+G 
Sbjct: 71  TELTFNSKPIITDLTIIAGEQKANGEGIADAICARIIEAPVDQKLPSLYLLDSIVKNIGK 130

Query: 175 QYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           +Y  +F+ RL  +F + Y+++ P +  +M HLF TW  Y P      IE  L+ S
Sbjct: 131 EYVRHFSSRLPEVFCEAYRQVDPSMYGSMRHLFGTWSTYFPPQVLRKIETELRFS 185


>ref|XP_015938301.1| polyadenylation and cleavage factor homolog 4-like [Arachis
           duranensis]
          Length = 179

 Score =  124 bits (312), Expect = 6e-33
 Identities = 71/156 (45%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
 Frame = -3

Query: 448 LRDRFDAKVEEMKQR--------GPVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKY 293
           L DRF A +++             P  T EI  L+   L ELT N K +I +LT IA   
Sbjct: 14  LVDRFKAMLKQRDDELRATAGHVSPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQ 73

Query: 292 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 113
            +H  GIA+AI  RI++VP EQKLPS YLLDSI+KN G++Y  YFA RL  +F + Y+++
Sbjct: 74  SEHARGIADAICARILKVPAEQKLPSLYLLDSIVKNFGEEYVEYFALRLPEVFCEAYRQV 133

Query: 112 SPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKSHI 5
            P L PAM HLF TW +  P  A   IE  LQ S +
Sbjct: 134 QPHLHPAMHHLFGTWSEVFPPSALRKIEAELQLSQV 169


>ref|XP_022036926.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 ref|XP_022036927.1| polyadenylation and cleavage factor homolog 4 [Helianthus annuus]
 gb|OTG23823.1| putative PCF11P-similar protein 4 [Helianthus annuus]
          Length = 886

 Score =  133 bits (335), Expect = 6e-33
 Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 10/176 (5%)
 Frame = -3

Query: 508 PNPNPNPMKRDREKFEARPALRDRFDAKVEEMKQRGPV----------GTSEITSLFGDF 359
           PN +  P+  +  +    P L DRF A ++E ++   V          GT EI  L+   
Sbjct: 18  PNDSVVPLGNNANQKSLTPIL-DRFKALLKEREEEARVSNDDLDVPLLGTGEIVELYEVV 76

Query: 358 LLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVG 179
           L EL  NSKP+I +LT IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G
Sbjct: 77  LSELVINSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIG 136

Query: 178 DQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
             Y  +F+ RL  +F   Y+++ P L P+M HLF TW    PS     IE  LQ S
Sbjct: 137 RDYIRHFSARLPEVFCAAYRQVHPSLHPSMRHLFGTWSTVFPSSVLRKIESQLQFS 192


>ref|XP_016173485.1| polyadenylation and cleavage factor homolog 4 [Arachis ipaensis]
          Length = 179

 Score =  124 bits (310), Expect = 1e-32
 Identities = 66/132 (50%), Positives = 84/132 (63%)
 Frame = -3

Query: 400 PVGTSEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 221
           P  T EI  L+   L ELT N K +I +LT IA   ++H  GIA+AI  RI++VP EQKL
Sbjct: 38  PPSTEEIVQLYEMLLSELTCNQKLIITDLTLIAVHQREHARGIADAICARILKVPAEQKL 97

Query: 220 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFRTWGKYIPSFAR 41
           PS YLLDSI+KN G++Y  YFA RL  +F + Y+++ P L PAM HLF TW +  P  A 
Sbjct: 98  PSLYLLDSIVKNFGEEYVGYFALRLPEVFCEAYRQVQPHLHPAMRHLFGTWSEVFPPSAL 157

Query: 40  DSIEEFLQKSHI 5
             IE  LQ S +
Sbjct: 158 RKIEAELQLSQV 169


>ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score =  132 bits (332), Expect = 1e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFS 172


>ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Gossypium hirsutum]
          Length = 1024

 Score =  132 bits (332), Expect = 2e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFS 172


>gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium barbadense]
          Length = 1030

 Score =  132 bits (332), Expect = 2e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFS 172


>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score =  132 bits (331), Expect = 2e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFS 172


>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium raimondii]
          Length = 1001

 Score =  132 bits (331), Expect = 2e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFS 172


>gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium barbadense]
          Length = 1004

 Score =  132 bits (331), Expect = 2e-32
 Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G +         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLGKIEMQLQFS 172


>ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Gossypium raimondii]
 gb|KJB67156.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1004

 Score =  132 bits (331), Expect = 2e-32
 Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 12/160 (7%)
 Frame = -3

Query: 454 PALRDRFDA----KVEEMKQRGPVG--------TSEITSLFGDFLLELTRNSKPLIMELT 311
           P++ +RF A    + +E++  G V         T EI  L+   L ELT NSKP+I +LT
Sbjct: 13  PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72

Query: 310 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 131
            IA + ++H +GIA+AI  RI+EVPVEQKLPS YLLDSI+KN+G +Y  YF+ RL  +F 
Sbjct: 73  IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132

Query: 130 DTYKKLSPCLRPAMVHLFRTWGKYIPSFARDSIEEFLQKS 11
           + Y++++P L PAM HLF TW    P      IE  LQ S
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFS 172