BLASTX nr result
ID: Ophiopogon24_contig00032261
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00032261
(379 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008777633.1| PREDICTED: DNA mismatch repair protein MSH5,... 94 9e-20
ref|XP_010915350.1| PREDICTED: DNA mismatch repair protein MSH5 ... 94 9e-20
ref|XP_020274530.1| DNA mismatch repair protein MSH5 isoform X5 ... 93 2e-19
ref|XP_020274529.1| DNA mismatch repair protein MSH5 isoform X4 ... 93 2e-19
ref|XP_020274528.1| DNA mismatch repair protein MSH5 isoform X3 ... 93 2e-19
ref|XP_020274527.1| DNA mismatch repair protein MSH5 isoform X2 ... 93 2e-19
ref|XP_020274526.1| DNA mismatch repair protein MSH5 isoform X1 ... 93 2e-19
ref|XP_018683409.1| PREDICTED: DNA mismatch repair protein MSH5 ... 89 7e-18
ref|XP_018683408.1| PREDICTED: DNA mismatch repair protein MSH5 ... 89 7e-18
ref|XP_009406511.1| PREDICTED: DNA mismatch repair protein MSH5 ... 89 7e-18
ref|XP_020092416.1| DNA mismatch repair protein MSH5 isoform X15... 86 4e-17
ref|XP_020092415.1| DNA mismatch repair protein MSH5 isoform X14... 86 4e-17
ref|XP_020092413.1| DNA mismatch repair protein MSH5 isoform X13... 86 4e-17
ref|XP_020092410.1| DNA mismatch repair protein MSH5 isoform X12... 86 4e-17
ref|XP_020092409.1| DNA mismatch repair protein MSH5 isoform X11... 86 4e-17
ref|XP_020092408.1| DNA mismatch repair protein MSH5 isoform X10... 86 4e-17
ref|XP_020092405.1| DNA mismatch repair protein MSH5 isoform X9 ... 86 4e-17
ref|XP_020092403.1| DNA mismatch repair protein MSH5 isoform X8 ... 86 4e-17
ref|XP_020092402.1| DNA mismatch repair protein MSH5 isoform X7 ... 86 4e-17
ref|XP_020092401.1| DNA mismatch repair protein MSH5 isoform X6 ... 86 4e-17
>ref|XP_008777633.1| PREDICTED: DNA mismatch repair protein MSH5, partial [Phoenix
dactylifera]
Length = 773
Score = 94.0 bits (232), Expect = 9e-20
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 196 LWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
L KKFN PSSLCTS DWNAFL+CICSLL INKI +VGISEY++ERLE+LNLGLV
Sbjct: 243 LLKKFNSPSSLCTSSDWNAFLECICSLLHINKIFQVGISEYLQERLEYLNLGLV 296
>ref|XP_010915350.1| PREDICTED: DNA mismatch repair protein MSH5 [Elaeis guineensis]
Length = 809
Score = 94.0 bits (232), Expect = 9e-20
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 196 LWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
L KKFN PSSLCTS DWNAFL+CICSLL INKI +VGISEY++ERLE+LNLGLV
Sbjct: 279 LLKKFNSPSSLCTSNDWNAFLECICSLLHINKIFQVGISEYLQERLEYLNLGLV 332
>ref|XP_020274530.1| DNA mismatch repair protein MSH5 isoform X5 [Asparagus officinalis]
Length = 683
Score = 93.2 bits (230), Expect = 2e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSS CTSGDWNAFLKCICSLL INKI EVGISEY++ERLEHL+L LV
Sbjct: 157 KKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLV 208
>ref|XP_020274529.1| DNA mismatch repair protein MSH5 isoform X4 [Asparagus officinalis]
Length = 693
Score = 93.2 bits (230), Expect = 2e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSS CTSGDWNAFLKCICSLL INKI EVGISEY++ERLEHL+L LV
Sbjct: 167 KKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLV 218
>ref|XP_020274528.1| DNA mismatch repair protein MSH5 isoform X3 [Asparagus officinalis]
Length = 725
Score = 93.2 bits (230), Expect = 2e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSS CTSGDWNAFLKCICSLL INKI EVGISEY++ERLEHL+L LV
Sbjct: 199 KKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLV 250
>ref|XP_020274527.1| DNA mismatch repair protein MSH5 isoform X2 [Asparagus officinalis]
Length = 736
Score = 93.2 bits (230), Expect = 2e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSS CTSGDWNAFLKCICSLL INKI EVGISEY++ERLEHL+L LV
Sbjct: 210 KKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLV 261
>ref|XP_020274526.1| DNA mismatch repair protein MSH5 isoform X1 [Asparagus officinalis]
Length = 807
Score = 93.2 bits (230), Expect = 2e-19
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSS CTSGDWNAFLKCICSLL INKI EVGISEY++ERLEHL+L LV
Sbjct: 281 KKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLV 332
>ref|XP_018683409.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Musa
acuminata subsp. malaccensis]
ref|XP_018683410.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Musa
acuminata subsp. malaccensis]
ref|XP_018683411.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 668
Score = 88.6 bits (218), Expect = 7e-18
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSSLCT+ DWNAFLKCICSLL INKI EVGISEY++E+LE+L L LV
Sbjct: 283 KKFNSPSSLCTTSDWNAFLKCICSLLHINKIFEVGISEYLQEKLEYLKLDLV 334
>ref|XP_018683408.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 711
Score = 88.6 bits (218), Expect = 7e-18
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSSLCT+ DWNAFLKCICSLL INKI EVGISEY++E+LE+L L LV
Sbjct: 283 KKFNSPSSLCTTSDWNAFLKCICSLLHINKIFEVGISEYLQEKLEYLKLDLV 334
>ref|XP_009406511.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 810
Score = 88.6 bits (218), Expect = 7e-18
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +1
Query: 202 KKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGLV 357
KKFN PSSLCT+ DWNAFLKCICSLL INKI EVGISEY++E+LE+L L LV
Sbjct: 283 KKFNSPSSLCTTSDWNAFLKCICSLLHINKIFEVGISEYLQEKLEYLKLDLV 334
>ref|XP_020092416.1| DNA mismatch repair protein MSH5 isoform X15 [Ananas comosus]
Length = 659
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092415.1| DNA mismatch repair protein MSH5 isoform X14 [Ananas comosus]
Length = 700
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092413.1| DNA mismatch repair protein MSH5 isoform X13 [Ananas comosus]
Length = 705
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092410.1| DNA mismatch repair protein MSH5 isoform X12 [Ananas comosus]
ref|XP_020092411.1| DNA mismatch repair protein MSH5 isoform X12 [Ananas comosus]
ref|XP_020092412.1| DNA mismatch repair protein MSH5 isoform X12 [Ananas comosus]
Length = 718
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092409.1| DNA mismatch repair protein MSH5 isoform X11 [Ananas comosus]
Length = 727
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 191 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 250
Query: 355 V 357
+
Sbjct: 251 L 251
>ref|XP_020092408.1| DNA mismatch repair protein MSH5 isoform X10 [Ananas comosus]
Length = 753
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092405.1| DNA mismatch repair protein MSH5 isoform X9 [Ananas comosus]
ref|XP_020092406.1| DNA mismatch repair protein MSH5 isoform X9 [Ananas comosus]
ref|XP_020092407.1| DNA mismatch repair protein MSH5 isoform X9 [Ananas comosus]
Length = 767
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 231 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 290
Query: 355 V 357
+
Sbjct: 291 L 291
>ref|XP_020092403.1| DNA mismatch repair protein MSH5 isoform X8 [Ananas comosus]
Length = 769
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092402.1| DNA mismatch repair protein MSH5 isoform X7 [Ananas comosus]
Length = 785
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350
>ref|XP_020092401.1| DNA mismatch repair protein MSH5 isoform X6 [Ananas comosus]
Length = 800
Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 175 D*CMLAFLWKKFN*PSSLCTSGDWNAFLKCICSLLFINKIIEVGISEYIEERLEHLNLGL 354
D C L F KKFN PS+ CTS DWN FLKC+CSLL INKIIEVGI EYI+ER+E L +
Sbjct: 290 DLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAI 349
Query: 355 V 357
+
Sbjct: 350 L 350