BLASTX nr result

ID: Ophiopogon24_contig00031863 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00031863
         (577 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKI44710.1| hypothetical protein CRG98_034887 [Punica granatum]     40   4e-06

>gb|PKI44710.1| hypothetical protein CRG98_034887 [Punica granatum]
          Length = 109

 Score = 40.0 bits (92), Expect(2) = 4e-06
 Identities = 18/40 (45%), Positives = 30/40 (75%)
 Frame = -3

Query: 236 EKFDGKSNFLL*KM*INSLLVKEGVYKAINGKEKKPSTIE 117
           EKFD + +F L K+ I  +L+++G++KA+ GKEKK  ++E
Sbjct: 9   EKFDSRKDFKLWKIKIRDVLIQKGLHKALLGKEKKLKSME 48



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 118 NMDDVEWNEMYFHAKATIILYLSDEVLYNVMNEKTTAGL 2
           +M+D EW+E    A +TI L L+DEV++NV  EK  A L
Sbjct: 46  SMEDDEWDEQDEKAVSTIHLCLADEVIFNVKEEKIAASL 84


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