BLASTX nr result

ID: Ophiopogon24_contig00031533 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00031533
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270721.1| zinc finger CCCH domain-containing protein 3...    57   4e-06
gb|ONK66511.1| uncharacterized protein A4U43_C06F8950 [Asparagus...    57   4e-06

>ref|XP_020270721.1| zinc finger CCCH domain-containing protein 34-like [Asparagus
           officinalis]
          Length = 565

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 40/94 (42%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   PRNPRKYGSKDFEGPKTLNELLKDKRRSVLANGDANGSANEDHQASEDKELRHIGTLEKQ 181
           PRNPR+  SKDFEGPK LNELLK+KR         +    E +  S DKEL    T  K 
Sbjct: 481 PRNPRRPWSKDFEGPKPLNELLKEKR---------SVPGGEHNAISGDKELGRRETFRKG 531

Query: 182 SNG----XXXXXXXXXXXXXXXXLREKLVHMLSS 271
           SNG                    L EKL+ MLSS
Sbjct: 532 SNGYESEFVGDDDDDDDDVDEDVLHEKLIKMLSS 565


>gb|ONK66511.1| uncharacterized protein A4U43_C06F8950 [Asparagus officinalis]
          Length = 580

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 40/94 (42%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   PRNPRKYGSKDFEGPKTLNELLKDKRRSVLANGDANGSANEDHQASEDKELRHIGTLEKQ 181
           PRNPR+  SKDFEGPK LNELLK+KR         +    E +  S DKEL    T  K 
Sbjct: 496 PRNPRRPWSKDFEGPKPLNELLKEKR---------SVPGGEHNAISGDKELGRRETFRKG 546

Query: 182 SNG----XXXXXXXXXXXXXXXXLREKLVHMLSS 271
           SNG                    L EKL+ MLSS
Sbjct: 547 SNGYESEFVGDDDDDDDDVDEDVLHEKLIKMLSS 580


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