BLASTX nr result
ID: Ophiopogon24_contig00031520
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00031520
(532 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020272963.1| pentatricopeptide repeat-containing protein ... 120 2e-28
ref|XP_009380612.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-23
gb|PKA53849.1| Pentatricopeptide repeat-containing protein [Apos... 103 2e-22
ref|XP_020702634.1| pentatricopeptide repeat-containing protein ... 95 2e-19
ref|XP_020588519.1| pentatricopeptide repeat-containing protein ... 92 3e-18
ref|XP_010909968.1| PREDICTED: pentatricopeptide repeat-containi... 90 1e-17
gb|OAY72362.1| Pentatricopeptide repeat-containing protein [Anan... 86 2e-16
ref|XP_009378945.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-15
ref|XP_017185268.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-15
ref|XP_008343078.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-15
ref|XP_015881313.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-15
gb|PKI62874.1| hypothetical protein CRG98_016711 [Punica granatum] 77 3e-13
ref|XP_022865565.1| pentatricopeptide repeat-containing protein ... 77 3e-13
ref|XP_022865563.1| pentatricopeptide repeat-containing protein ... 77 3e-13
emb|CBI22025.3| unnamed protein product, partial [Vitis vinifera] 77 5e-13
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 77 5e-13
dbj|GAY34588.1| hypothetical protein CUMW_276950 [Citrus unshiu] 76 7e-13
dbj|GAY34583.1| hypothetical protein CUMW_276940 [Citrus unshiu] 76 7e-13
gb|POE71466.1| pentatricopeptide repeat-containing protein [Quer... 76 8e-13
ref|XP_023883573.1| pentatricopeptide repeat-containing protein ... 76 9e-13
>ref|XP_020272963.1| pentatricopeptide repeat-containing protein At2g41080 [Asparagus
officinalis]
gb|ONK62095.1| uncharacterized protein A4U43_C07F310 [Asparagus officinalis]
Length = 653
Score = 120 bits (302), Expect = 2e-28
Identities = 58/77 (75%), Positives = 65/77 (84%)
Frame = -3
Query: 233 LLPKSKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHA 54
L +SK+ EEFI+ CS+G+L QALQGF+P L SDPNLFSHLL+GCC KQSL Q QLHA
Sbjct: 13 LSSRSKTDEEFIERCSKGYLKQALQGFLPRLRSDPNLFSHLLRGCCTPKQSLSQGQQLHA 72
Query: 53 FIIASGASSDRFTSNHL 3
FIIASGASSDRFTSNHL
Sbjct: 73 FIIASGASSDRFTSNHL 89
>ref|XP_009380612.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Musa acuminata subsp. malaccensis]
ref|XP_018674557.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Musa acuminata subsp. malaccensis]
Length = 660
Score = 107 bits (266), Expect = 1e-23
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -3
Query: 218 KSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIAS 39
KS +EF+ LCS+G L +AL+GF+P L SDPNLFSHLL GCC+ +QSLRQ Q+HA I+A+
Sbjct: 24 KSEQEFVHLCSKGRLREALRGFLPELWSDPNLFSHLLNGCCVPQQSLRQGQQIHALIVAA 83
Query: 38 GASSDRFTSNHL 3
GA+S RFT+NHL
Sbjct: 84 GAASHRFTANHL 95
>gb|PKA53849.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 653
Score = 103 bits (257), Expect = 2e-22
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = -3
Query: 227 PKSKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFI 48
P KS EEFI LCS+G L QALQGF P + +D NLF+HLL+GCC +QSL QLH FI
Sbjct: 14 PPPKSKEEFIGLCSRGFLRQALQGFFPEVFADSNLFAHLLQGCCFPQQSLSLGRQLHGFI 73
Query: 47 IASGASSDRFTSNHL 3
+A+GA+SDRFT+NHL
Sbjct: 74 VAAGAASDRFTANHL 88
>ref|XP_020702634.1| pentatricopeptide repeat-containing protein At2g41080 [Dendrobium
catenatum]
Length = 652
Score = 95.1 bits (235), Expect = 2e-19
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = -3
Query: 227 PKSKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFI 48
PKSK EEF LCS+G L QAL GFIP + +D NLFS+LLKGC I ++SL QLH FI
Sbjct: 15 PKSK--EEFTNLCSRGFLRQALYGFIPEVFADLNLFSYLLKGCSIPQESLSHGRQLHGFI 72
Query: 47 IASGASSDRFTSNHL 3
+ GAS+DRFT+NHL
Sbjct: 73 VTCGASADRFTANHL 87
>ref|XP_020588519.1| pentatricopeptide repeat-containing protein At2g41080 [Phalaenopsis
equestris]
Length = 652
Score = 91.7 bits (226), Expect = 3e-18
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
+KS EEF LCS+G L QAL GF+P + +DPNLFS LLK C +SL QLH FI+
Sbjct: 15 TKSKEEFTHLCSRGFLRQALHGFLPEVFADPNLFSCLLKACSTSHESLSHGRQLHGFIVT 74
Query: 41 SGASSDRFTSNHL 3
GAS+DRFT+NHL
Sbjct: 75 CGASADRFTANHL 87
>ref|XP_010909968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Elaeis guineensis]
Length = 670
Score = 89.7 bits (221), Expect = 1e-17
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
SKS +EFI LCS+G L +AL GF+P L +DPNLFSH L+ CC+ QLHA II
Sbjct: 36 SKSKQEFIHLCSKGSLREALLGFLPELFADPNLFSHPLQACCLLPPG--HGQQLHALIIT 93
Query: 41 SGASSDRFTSNHL 3
SGAS+DRFT+NHL
Sbjct: 94 SGASNDRFTANHL 106
>gb|OAY72362.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 657
Score = 86.3 bits (212), Expect = 2e-16
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = -3
Query: 227 PKSKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFI 48
P S +EF++LCS G L +AL + SDPNLFSHLL+G C +LR HQLHAFI
Sbjct: 23 PPSSHKQEFLRLCSNGSLREALGVLLSQQWSDPNLFSHLLRGAC----TLRHVHQLHAFI 78
Query: 47 IASGASSDRFTSNHL 3
+ASGA++DRF +NHL
Sbjct: 79 LASGAAADRFAANHL 93
>ref|XP_009378945.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Pyrus x bretschneideri]
Length = 668
Score = 82.8 bits (203), Expect = 4e-15
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -3
Query: 209 EEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASGAS 30
E+F LCS+GH+ QA +GF + SDP+LFSHLLK CI +SL A QLH+ I+ SG S
Sbjct: 37 EQFTNLCSKGHIKQAFEGFKSQIWSDPSLFSHLLK-ACIPSESLSLAKQLHSLIVTSGCS 95
Query: 29 SDRFTSNHL 3
+D+F SNHL
Sbjct: 96 ADKFVSNHL 104
>ref|XP_017185268.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Malus domestica]
Length = 671
Score = 82.4 bits (202), Expect = 5e-15
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -3
Query: 209 EEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASGAS 30
E+F LCS+GH+ QA +GF + SDP+LFSHLLK CI +SL A QLH+ I+ SG S
Sbjct: 40 EQFTNLCSKGHIKQAFEGFKSQIWSDPSLFSHLLK-ACIPSKSLSLAKQLHSLIVTSGCS 98
Query: 29 SDRFTSNHL 3
+D+F SNHL
Sbjct: 99 ADKFVSNHL 107
>ref|XP_008343078.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Malus domestica]
ref|XP_017179350.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Malus domestica]
Length = 671
Score = 82.4 bits (202), Expect = 5e-15
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -3
Query: 209 EEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASGAS 30
E+F LCS+GH+ QA +GF + SDP+LFSHLLK CI +SL A QLH+ I+ SG S
Sbjct: 40 EQFTNLCSKGHIKQAFEGFKSQIWSDPSLFSHLLK-ACIPSKSLSLAKQLHSLIVTSGCS 98
Query: 29 SDRFTSNHL 3
+D+F SNHL
Sbjct: 99 ADKFVSNHL 107
>ref|XP_015881313.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Ziziphus jujuba]
Length = 663
Score = 82.0 bits (201), Expect = 7e-15
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = -3
Query: 248 FYMATLLPKSKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQA 69
F T + SK+ EEF LCS+G + QA + F L SDP+LFSHLL+ CI K+SLR
Sbjct: 20 FASTTSIAASKT-EEFTSLCSKGQIKQAFESFSFELWSDPSLFSHLLQ-ACIPKRSLRLG 77
Query: 68 HQLHAFIIASGASSDRFTSNHL 3
QLH+ I+ SG SSD+F SNHL
Sbjct: 78 KQLHSLIVTSGCSSDKFVSNHL 99
>gb|PKI62874.1| hypothetical protein CRG98_016711 [Punica granatum]
Length = 665
Score = 77.4 bits (189), Expect = 3e-13
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = -3
Query: 206 EFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASGASS 27
EF LCS GHL +A + F + S+PNLFSHLL+ CI K SL A QLH II +G SS
Sbjct: 35 EFTDLCSSGHLKEAFERFKSKIWSNPNLFSHLLQ-ACIPKNSLPLAKQLHCLIITAGCSS 93
Query: 26 DRFTSNHL 3
D+F SNHL
Sbjct: 94 DKFVSNHL 101
>ref|XP_022865565.1| pentatricopeptide repeat-containing protein At2g41080 isoform X2
[Olea europaea var. sylvestris]
ref|XP_022865566.1| pentatricopeptide repeat-containing protein At2g41080 isoform X2
[Olea europaea var. sylvestris]
ref|XP_022865567.1| pentatricopeptide repeat-containing protein At2g41080 isoform X2
[Olea europaea var. sylvestris]
Length = 665
Score = 77.4 bits (189), Expect = 3e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
S + ++FI LCS+GHL QA + ++ SDP LFSHLLK CI + S A QLH+ II
Sbjct: 28 SAASQDFISLCSKGHLKQAFTIYFSHIWSDPPLFSHLLKE-CIERHSFPLAQQLHSLIIT 86
Query: 41 SGASSDRFTSNHL 3
+G S DRF SNHL
Sbjct: 87 AGCSRDRFVSNHL 99
>ref|XP_022865563.1| pentatricopeptide repeat-containing protein At2g41080 isoform X1
[Olea europaea var. sylvestris]
ref|XP_022865564.1| pentatricopeptide repeat-containing protein At2g41080 isoform X1
[Olea europaea var. sylvestris]
Length = 666
Score = 77.4 bits (189), Expect = 3e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
S + ++FI LCS+GHL QA + ++ SDP LFSHLLK CI + S A QLH+ II
Sbjct: 28 SAASQDFISLCSKGHLKQAFTIYFSHIWSDPPLFSHLLKE-CIERHSFPLAQQLHSLIIT 86
Query: 41 SGASSDRFTSNHL 3
+G S DRF SNHL
Sbjct: 87 AGCSRDRFVSNHL 99
>emb|CBI22025.3| unnamed protein product, partial [Vitis vinifera]
Length = 489
Score = 76.6 bits (187), Expect = 5e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
S+ EF LCS+GHL QA F ++ S+P+LFSHLL+ CI + SL QLH+ II
Sbjct: 22 SELTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQS-CISENSLSLGKQLHSLIIT 80
Query: 41 SGASSDRFTSNHL 3
SG SSD+F SNHL
Sbjct: 81 SGCSSDKFISNHL 93
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 76.6 bits (187), Expect = 5e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -3
Query: 221 SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIA 42
S+ EF LCS+GHL QA F ++ S+P+LFSHLL+ CI + SL QLH+ II
Sbjct: 22 SELTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQS-CISENSLSLGKQLHSLIIT 80
Query: 41 SGASSDRFTSNHL 3
SG SSD+F SNHL
Sbjct: 81 SGCSSDKFISNHL 93
>dbj|GAY34588.1| hypothetical protein CUMW_276950 [Citrus unshiu]
Length = 586
Score = 76.3 bits (186), Expect = 7e-13
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -3
Query: 215 SIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASG 36
S EEFI LCS+GHL +A+ F + SDP LFSHL++ C + K+SL + QLH+ I+ SG
Sbjct: 21 STEEFINLCSKGHLKEAVNRFKSEIWSDPTLFSHLIQSCTL-KKSLSCSKQLHSLIVTSG 79
Query: 35 ASSDRFTSNHL 3
SS+ F NHL
Sbjct: 80 CSSNNFICNHL 90
>dbj|GAY34583.1| hypothetical protein CUMW_276940 [Citrus unshiu]
Length = 1256
Score = 76.3 bits (186), Expect = 7e-13
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -3
Query: 215 SIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLRQAHQLHAFIIASG 36
S EEFI LCS+GHL +A+ F + SDP LFSHL++ C + K+SL + QLH+ I+ SG
Sbjct: 691 STEEFINLCSKGHLKEAVNRFKSEIWSDPTLFSHLIQSCTL-KKSLSCSKQLHSLIVTSG 749
Query: 35 ASSDRFTSNHL 3
SS+ F NHL
Sbjct: 750 CSSNNFICNHL 760
>gb|POE71466.1| pentatricopeptide repeat-containing protein [Quercus suber]
Length = 420
Score = 75.9 bits (185), Expect = 8e-13
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = -3
Query: 248 FYMATLLPK--SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLR 75
++ T+ K SK EEF LC +GH+ +A + F + SDP LFS+L+K CI ++SL
Sbjct: 24 YFFCTVTSKIASKVSEEFTNLCFKGHIKEAFERFKSEIFSDPPLFSNLIKS-CIPQKSLS 82
Query: 74 QAHQLHAFIIASGASSDRFTSNHL 3
QLH+ II SG SSD+F SNHL
Sbjct: 83 LGKQLHSLIITSGCSSDKFVSNHL 106
>ref|XP_023883573.1| pentatricopeptide repeat-containing protein At2g41080 [Quercus
suber]
Length = 670
Score = 75.9 bits (185), Expect = 9e-13
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = -3
Query: 248 FYMATLLPK--SKSIEEFIQLCSQGHLNQALQGFIPNLHSDPNLFSHLLKGCCIHKQSLR 75
++ T+ K SK EEF LC +GH+ +A + F + SDP LFS+L+K CI ++SL
Sbjct: 24 YFFCTVTSKIASKVSEEFTNLCFKGHIKEAFERFKSEIFSDPPLFSNLIKS-CIPQKSLS 82
Query: 74 QAHQLHAFIIASGASSDRFTSNHL 3
QLH+ II SG SSD+F SNHL
Sbjct: 83 LGKQLHSLIITSGCSSDKFVSNHL 106