BLASTX nr result

ID: Ophiopogon24_contig00031218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00031218
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256452.1| cyclin-D6-1 [Asparagus officinalis] >gi|1141...    57   1e-06

>ref|XP_020256452.1| cyclin-D6-1 [Asparagus officinalis]
 gb|ONK74654.1| uncharacterized protein A4U43_C03F8760 [Asparagus officinalis]
          Length = 297

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 44/85 (51%)
 Frame = +3

Query: 150 RNQSYQTKLDQKNNQKRNDLDFKPSVIXXXXXXXXXNELFPXXXXXXXXXXXXXXXXDKE 329
           +N++ +T    +N  K   L+FKPS+I         NELFP                 KE
Sbjct: 165 KNRALETLFLAQNEIKI--LEFKPSLIAASALLSAANELFPIQFNAFKSAISASEFVHKE 222

Query: 330 ELMECLSVMNDVAMSDCGSTFEMMS 404
           +L ECLSVM DVAM  C STFEM+S
Sbjct: 223 KLSECLSVMIDVAMDSCESTFEMIS 247


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