BLASTX nr result

ID: Ophiopogon24_contig00030993 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00030993
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]    47   8e-07
ref|XP_019429666.1| PREDICTED: uncharacterized protein LOC109337...    44   3e-06
ref|XP_020267043.1| uncharacterized protein LOC109842598 [Aspara...    38   8e-06
gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense]            41   8e-06
dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subt...    39   9e-06

>emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]
          Length = 1832

 Score = 46.6 bits (109), Expect(3) = 8e-07
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = -2

Query: 164  WKGMWKGCR------LFKIGLARSCVKGNTIKF*KDIWLGETSLDISFPNLFETALDKN 6
            WK +WK         +FK+G      KGNTI+F  D+W  ET+L   FP+LF  A+ +N
Sbjct: 1780 WKEIWKESXWCWNNMIFKVG------KGNTIRFWTDVWCSETALSHCFPHLFAMAVQRN 1832



 Score = 27.7 bits (60), Expect(3) = 8e-07
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 423  LWLGKSTVSGVMCLRNWKC-CKSKSQGGLGVINIRNQNLSLL 301
            LW G   + G   L NW+  C  K++GGLG+  +   N +LL
Sbjct: 1696 LW-GGGNMEGKTHLVNWEVVCTDKAKGGLGIRKLXLLNKALL 1736



 Score = 25.4 bits (54), Expect(3) = 8e-07
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 304  IGKWIWKLIADDNNSRVQYINHRF 233
            +GKWIW+   D +N   Q I  ++
Sbjct: 1736 LGKWIWRYACDKDNLWKQVIKVKY 1759


>ref|XP_019429666.1| PREDICTED: uncharacterized protein LOC109337200 [Lupinus
           angustifolius]
          Length = 695

 Score = 43.5 bits (101), Expect(3) = 3e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = -2

Query: 146 GCRLFKIGLARSCVKGNTIKF*KDIWLGETSLDISFPNLFETALDK 9
           GC     G+ RS   G++IK   D+W+G  +L  SFP LF+ ALDK
Sbjct: 630 GCGWINDGIRRSLGCGSSIKLWTDLWVGSDTLKSSFPILFQVALDK 675



 Score = 30.0 bits (66), Expect(3) = 3e-06
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 423 LWLGKSTVSGVMCLRNWKCCKSKSQGGLGVINIRNQNLSLL 301
           LW       G+  +R  K C  K +GGLG+ N+   NL+LL
Sbjct: 530 LWGKGEESKGIHWVRWEKVCMPKDEGGLGIKNLFLFNLALL 570



 Score = 24.3 bits (51), Expect(3) = 3e-06
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 304 IGKWIWKLIADDNNSRVQYINHRF 233
           + KW W+L+ D N+  V+ +  R+
Sbjct: 570 LDKWRWRLLFDGNSLWVKVLKSRY 593


>ref|XP_020267043.1| uncharacterized protein LOC109842598 [Asparagus officinalis]
          Length = 728

 Score = 38.1 bits (87), Expect(3) = 8e-06
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -1

Query: 423 LWLGKSTVSGVMCLRNW-KCCKSKSQGGLGVINIRNQNLSLL 301
           LW G  + S    + NW   CKSK +GGLGVI+I + N +LL
Sbjct: 329 LWNGSHSFSRAKFIVNWGTVCKSKEEGGLGVIDIPSFNSALL 370



 Score = 32.7 bits (73), Expect(3) = 8e-06
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 101 GNTIKF*KDIWLGETSLDISFPNLFETALDKNC 3
           GNT  F  D W    SL   +P+ ++ AL KNC
Sbjct: 433 GNTASFWHDKWSSTNSLSSLYPHAYKLALSKNC 465



 Score = 25.4 bits (54), Expect(3) = 8e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 304 IGKWIWKLIADDNNSRVQYINHRFFRVRKK 215
           + KWIWKL+      R  Y++  FF +  K
Sbjct: 370 LSKWIWKLL-----DRPSYLSKVFFSIYSK 394


>gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense]
          Length = 615

 Score = 41.2 bits (95), Expect(3) = 8e-06
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = -2

Query: 176 SSFFWKGMWK-----GCRLFKIGLARSCVKGNTIKF*KDIWLGETSLDISFPNLFETALD 12
           SS +WK +W          F  G+ +    G+  KF +DIW+G   L   FP LF  +  
Sbjct: 328 SSTWWKDIWSIRVNLNTNWFTQGVIKRIGCGDQTKFWRDIWVGTVPLQERFPRLFSVSTQ 387

Query: 11  KNC 3
           K+C
Sbjct: 388 KDC 390



 Score = 30.8 bits (68), Expect(3) = 8e-06
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 423 LWLGKSTVSGVMCLRNWKCCKSKSQGGLGVINIRNQNLSLL 301
           LW  K   + +  ++    CK K  GGLGV +IR  N+SLL
Sbjct: 246 LWGSKGGRNRISWVKWDTVCKPKKLGGLGVRDIRAVNISLL 286



 Score = 24.3 bits (51), Expect(3) = 8e-06
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 304 IGKWIWKLIADDN 266
           + KW W+L+ DDN
Sbjct: 286 LAKWRWRLLEDDN 298


>dbj|GAU25119.1| hypothetical protein TSUD_274080 [Trifolium subterraneum]
          Length = 937

 Score = 38.9 bits (89), Expect(2) = 9e-06
 Identities = 25/79 (31%), Positives = 41/79 (51%)
 Frame = -1

Query: 423 LWLGKSTVSGVMCLRNWKCCKSKSQGGLGVINIRNQNLSLLVSGYGN*LQTIIIAGSNIL 244
           LW G    S +  ++  + CK +SQGGLGV ++   NLSLL+      LQ       ++L
Sbjct: 535 LWGGVKGGSKISWVKWKEVCKPRSQGGLGVRDVGKVNLSLLIKWRWKLLQKDAAVWKDVL 594

Query: 243 IIDSLELGKNSC*RVIYLG 187
           +      G+N+   V+++G
Sbjct: 595 V---ARYGENARHNVLWIG 610



 Score = 38.1 bits (87), Expect(2) = 9e-06
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
 Frame = -2

Query: 182 TDSSFFWKGMWKGCRL--------FKIGLARSCVKGNTIKF*KDIWLGETSLDISFPNLF 27
           + +S +W+ +   CR+        F   ++R   +G+T +F KD W+G+  L  SFP LF
Sbjct: 615 SSASCWWRDL---CRIDLTEEGSWFAKNISRRVGRGDTTRFWKDCWVGQVPLCESFPRLF 671

Query: 26  ETALDK 9
             +L K
Sbjct: 672 SISLQK 677


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