BLASTX nr result

ID: Ophiopogon24_contig00030863 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00030863
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75603.1| uncharacterized protein A4U43_C03F18630 [Asparagu...    98   3e-21
gb|OAY64382.1| putative uncharacterized protein, chloroplastic [...    65   2e-09
ref|XP_020112224.1| ATP-dependent RNA helicase DEAH12, chloropla...    65   2e-09

>gb|ONK75603.1| uncharacterized protein A4U43_C03F18630 [Asparagus officinalis]
          Length = 1739

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 50/66 (75%), Positives = 54/66 (81%)
 Frame = -2

Query: 223 AIDDLIASLPSPPKAPLVFPSRGGLAGERNTAAKLIFPSASDSLDAVAFLWRRRLGGAHF 44
           +IDDLIASLP PPK PLVFPSR     E+ TAAKL FPS SD+LDAV FLWRRRL GAHF
Sbjct: 65  SIDDLIASLPCPPKDPLVFPSR-----EKRTAAKLFFPSLSDALDAVIFLWRRRLDGAHF 119

Query: 43  LVPEID 26
           LVPEI+
Sbjct: 120 LVPEIE 125


>gb|OAY64382.1| putative uncharacterized protein, chloroplastic [Ananas comosus]
          Length = 1680

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 42/108 (38%), Positives = 59/108 (54%)
 Frame = -2

Query: 334 YHQDYRPSPNFRRRPSAEFAVLLKYPPFKDPRPLAPRAIDDLIASLPSPPKAPLVFPSRG 155
           Y + +RP P     P+  F VLL     +  R  AP+ +D L++++P PP    V+P  G
Sbjct: 6   YSRPHRPYPP----PAPPFEVLLARSSAR--RGTAPKDVDTLVSAIPIPPAEFFVYPF-G 58

Query: 154 GLAGERNTAAKLIFPSASDSLDAVAFLWRRRLGGAHFLVPEIDSRDAS 11
            LAG      +L +    D+LDAV FLWRRRL GAH L P + +  A+
Sbjct: 59  PLAG------RLCYRREVDALDAVVFLWRRRLQGAHHLSPRVAAASAT 100


>ref|XP_020112224.1| ATP-dependent RNA helicase DEAH12, chloroplastic-like [Ananas
           comosus]
          Length = 1708

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 42/108 (38%), Positives = 59/108 (54%)
 Frame = -2

Query: 334 YHQDYRPSPNFRRRPSAEFAVLLKYPPFKDPRPLAPRAIDDLIASLPSPPKAPLVFPSRG 155
           Y + +RP P     P+  F VLL     +  R  AP+ +D L++++P PP    V+P  G
Sbjct: 6   YSRPHRPYPP----PAPPFEVLLARSSAR--RGTAPKDVDTLVSAIPIPPAEFFVYPF-G 58

Query: 154 GLAGERNTAAKLIFPSASDSLDAVAFLWRRRLGGAHFLVPEIDSRDAS 11
            LAG      +L +    D+LDAV FLWRRRL GAH L P + +  A+
Sbjct: 59  PLAG------RLCYRREVDALDAVVFLWRRRLQGAHHLSPRVAAASAA 100


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