BLASTX nr result

ID: Ophiopogon24_contig00030816 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00030816
         (502 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagu...   129   2e-31
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]    123   2e-29
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...   114   2e-26
gb|ONK61138.1| uncharacterized protein A4U43_C08F26630 [Asparagu...    82   2e-16
gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagu...    59   5e-07

>gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagus officinalis]
          Length = 804

 Score =  129 bits (324), Expect = 2e-31
 Identities = 63/160 (39%), Positives = 100/160 (62%)
 Frame = -2

Query: 486 SVFSRLSNTAATNSSKRRHSRQKAISEKEYLEVTSNMIRAGKQPSLSSEESDAERTPQVK 307
           S+F+R +N    N+  RRH  +K   E +YL VTSNM+  G+  +LSS+ S+ + +P V+
Sbjct: 409 SMFNRPTNVVLLNN--RRHPHRKKTLEDKYLRVTSNMVGRGRSSTLSSDGSETDHSPSVR 466

Query: 306 ELLAKFDSVYQHTRTKTGKLLPVDYKRLAQGLDSGEDHXXXXXXXXXXXXXAKEKHVHMA 127
           E+  +F+ +YQ TRT+TG + P++Y+ LA+G +S ++H               E  VHMA
Sbjct: 467 EITNEFEGIYQRTRTRTGAIPPINYQSLARGTNSDDEHSAIAESQSSSSFVGHESFVHMA 526

Query: 126 DSTDDTTKRLDEHHAMLMAQQTTLNELKILMTHLVKDRKK 7
           + ++D +KRLDE  AML +QQ  +NEL  ++T +V D+ K
Sbjct: 527 EHSEDLSKRLDEQEAMLKSQQEAINELMAMLTQIVADKAK 566


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score =  123 bits (308), Expect = 2e-29
 Identities = 64/160 (40%), Positives = 102/160 (63%)
 Frame = -2

Query: 492 RPSVFSRLSNTAATNSSKRRHSRQKAISEKEYLEVTSNMIRAGKQPSLSSEESDAERTPQ 313
           R SVF RL++ A    +KRR  ++K +SE EY +VT NM   GK P  SS+ES+   +P 
Sbjct: 310 RRSVFDRLTDVA--RPTKRRRQKKK-VSEVEYPQVTINMTSRGKAPCPSSDESERSHSPT 366

Query: 312 VKELLAKFDSVYQHTRTKTGKLLPVDYKRLAQGLDSGEDHXXXXXXXXXXXXXAKEKHVH 133
           V+E+  +F+ VY+HTR++TG + PV+Y++LAQG+ + ++H             A++  V+
Sbjct: 367 VREICDEFEGVYRHTRSRTGAIRPVNYQKLAQGITTSDEHSAIAESQSSSSIGAQKVSVY 426

Query: 132 MADSTDDTTKRLDEHHAMLMAQQTTLNELKILMTHLVKDR 13
           M  + +D  KR+DEHH ML AQQ TL ++K ++  L+ ++
Sbjct: 427 MTGNPEDIAKRVDEHHVMLQAQQETLLQVKDMLAQLLAEK 466


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score =  114 bits (286), Expect = 2e-26
 Identities = 61/160 (38%), Positives = 94/160 (58%)
 Frame = -2

Query: 492 RPSVFSRLSNTAATNSSKRRHSRQKAISEKEYLEVTSNMIRAGKQPSLSSEESDAERTPQ 313
           R SVF RL+N      +KR+   +K  +E EY +VT NMI  GK     S+ES     P 
Sbjct: 367 RQSVFDRLTNVV--RPAKRQRRCRKKTAEAEYPQVTINMIGQGKASHTDSDESQESHPPT 424

Query: 312 VKELLAKFDSVYQHTRTKTGKLLPVDYKRLAQGLDSGEDHXXXXXXXXXXXXXAKEKHVH 133
           V+E+  +F+ VYQ+TRT+TG + PV+Y++LA+ + + ++H             A+E   +
Sbjct: 425 VREICDQFEGVYQNTRTRTGAIRPVNYQKLAKRITTSDEHSAIAESQSSSSVGAREVSAY 484

Query: 132 MADSTDDTTKRLDEHHAMLMAQQTTLNELKILMTHLVKDR 13
              + +D TKR+DEHH ML AQQ TL +LK ++  L+ ++
Sbjct: 485 TTGNHEDITKRVDEHHVMLQAQQETLLQLKDMLAQLLAEK 524


>gb|ONK61138.1| uncharacterized protein A4U43_C08F26630 [Asparagus officinalis]
          Length = 181

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 43/98 (43%), Positives = 63/98 (64%)
 Frame = -2

Query: 486 SVFSRLSNTAATNSSKRRHSRQKAISEKEYLEVTSNMIRAGKQPSLSSEESDAERTPQVK 307
           SVF+RL+N       +RR+ ++    E EY EVT N+I  GK    SSEES    +P V+
Sbjct: 80  SVFNRLTNVVRPAKRQRRYKKKTV--ETEYPEVTINVIGRGKALGPSSEESQRSYSPTVR 137

Query: 306 ELLAKFDSVYQHTRTKTGKLLPVDYKRLAQGLDSGEDH 193
           E+  +F+ VY HTRT+TG +  V+Y+RLA+G+ S ++H
Sbjct: 138 EICDEFEGVYHHTRTRTGTIRSVNYQRLAKGIISDDEH 175


>gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagus officinalis]
          Length = 409

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 5/167 (2%)
 Frame = -2

Query: 492 RPSVFSRLSNTAAT---NSSKRRHSRQKAISEKEYLEVTSNMIRAGKQPSLSSEESDAER 322
           +PSVF RLS  ++    +  +RRH +     + E   VT NM    K    +S +SD+  
Sbjct: 245 KPSVFERLSQQSSRPRLSRRRRRHQKGSVADDLELASVTVNMTDKEKAALSNSPDSDSVL 304

Query: 321 TPQVKELLAKFDSVYQHTRTKTGKLLPVDYKRLA-QGLDSGEDHXXXXXXXXXXXXXAKE 145
            P  +    + D ++Q TR++ G  +  DY  L     D  E H               +
Sbjct: 305 RPNTRFARRRQDGIFQQTRSRRGASIGFDYSTLVPPSYDEDEVHSAAATSQTSRSSQDAQ 364

Query: 144 KHVHMADSTDDTTKRLDEHHAMLMAQQT-TLNELKILMTHLVKDRKK 7
             VHM      T    ++  A  M +QT T++ L+ +M  L+  +KK
Sbjct: 365 ARVHM------TKLNTEQTMAQKMEEQTATIDSLREMMEQLLNKKKK 405


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