BLASTX nr result
ID: Ophiopogon24_contig00030056
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00030056
(439 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020248013.1| E3 ubiquitin-protein ligase RFWD3-like [Aspa... 135 2e-36
ref|XP_009389255.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 127 6e-32
ref|XP_008813256.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 122 1e-31
ref|XP_009389253.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 127 4e-31
ref|XP_020094244.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 124 4e-30
ref|XP_020094243.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 124 4e-30
ref|XP_020094242.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 124 4e-30
gb|ONK56982.1| uncharacterized protein A4U43_C10F15330 [Asparagu... 122 1e-29
ref|XP_020704726.1| E3 ubiquitin-protein ligase RFWD3-like, part... 112 3e-28
ref|XP_010918610.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 118 6e-28
ref|XP_020167038.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 112 4e-26
ref|XP_020167037.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 112 4e-26
ref|XP_020703254.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 112 4e-26
ref|XP_020703253.1| E3 ubiquitin-protein ligase RFWD3-like isofo... 112 4e-26
ref|XP_020248012.1| uncharacterized protein LOC109825566 [Aspara... 108 1e-25
gb|OQU93429.1| hypothetical protein SORBI_3001G538100 [Sorghum b... 111 1e-25
ref|XP_002468674.1| E3 ubiquitin-protein ligase RFWD3 [Sorghum b... 111 1e-25
gb|ONL92732.1| Transducin/WD40 repeat-like superfamily protein [... 105 1e-25
gb|EAZ25299.1| hypothetical protein OsJ_09109 [Oryza sativa Japo... 106 2e-25
ref|XP_020587615.1| E3 ubiquitin-protein ligase RFWD3-like [Phal... 110 2e-25
>ref|XP_020248013.1| E3 ubiquitin-protein ligase RFWD3-like [Asparagus officinalis]
Length = 273
Score = 135 bits (340), Expect = 2e-36
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 5/117 (4%)
Frame = +1
Query: 79 DDEEDG-----CDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNT 243
++EE+G C+QS G DCPIC SW S+G HRICC PCGH+YGRSCLE+WL+RH + +
Sbjct: 116 EEEEEGNGIESCNQSCGADCPICLLSWNSDGPHRICCIPCGHIYGRSCLEQWLQRHQRKS 175
Query: 244 GKCPQCKRKFKQQNIINLYAQLTAVTNDDIVAPSEVRSREGNVGREGGHRVEVRSRE 414
KCPQC+ KFK +NIINL+AQLT TN E N G +VEV+ +
Sbjct: 176 AKCPQCREKFKHKNIINLHAQLTTATN------------ESNNASASGEKVEVQGEQ 220
>ref|XP_009389255.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 424
Score = 127 bits (318), Expect = 6e-32
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Frame = +1
Query: 67 ELSGDDEEDGC--DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKN 240
E G D+ DG D+S CP+CF +W ++G HR+CC PCGHVYGRSCLE+W K+ GKN
Sbjct: 125 ESEGLDKTDGVELDRSLFPSCPVCFETWSADGPHRVCCIPCGHVYGRSCLERWFKQFGKN 184
Query: 241 TGKCPQCKRKFKQQNIINLYAQLTAVTNDDIVAPSEVRS-REGN 369
GKCPQC RKF+++ +INLYA L V NDD+ EV S RE N
Sbjct: 185 IGKCPQCNRKFRRKEMINLYAPLIVVPNDDL--EKEVHSLREQN 226
>ref|XP_008813256.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3 [Phoenix dactylifera]
Length = 256
Score = 122 bits (306), Expect = 1e-31
Identities = 51/78 (65%), Positives = 59/78 (75%)
Frame = +1
Query: 100 DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQ 279
D+S +CPICF W S+G HR+ C PCGHVYGRSCLE+WL + GK TGKCPQC R FKQ
Sbjct: 159 DRSFTPNCPICFEMWTSDGPHRVSCIPCGHVYGRSCLERWLDQRGKKTGKCPQCNRNFKQ 218
Query: 280 QNIINLYAQLTAVTNDDI 333
+ IINLYA L V NDD+
Sbjct: 219 KEIINLYAPLIVVPNDDL 236
>ref|XP_009389253.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 649
Score = 127 bits (318), Expect = 4e-31
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Frame = +1
Query: 67 ELSGDDEEDGC--DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKN 240
E G D+ DG D+S CP+CF +W ++G HR+CC PCGHVYGRSCLE+W K+ GKN
Sbjct: 125 ESEGLDKTDGVELDRSLFPSCPVCFETWSADGPHRVCCIPCGHVYGRSCLERWFKQFGKN 184
Query: 241 TGKCPQCKRKFKQQNIINLYAQLTAVTNDDIVAPSEVRS-REGN 369
GKCPQC RKF+++ +INLYA L V NDD+ EV S RE N
Sbjct: 185 IGKCPQCNRKFRRKEMINLYAPLIVVPNDDL--EKEVHSLREQN 226
>ref|XP_020094244.1| E3 ubiquitin-protein ligase RFWD3-like isoform X3 [Ananas comosus]
Length = 665
Score = 124 bits (311), Expect = 4e-30
Identities = 52/87 (59%), Positives = 61/87 (70%)
Frame = +1
Query: 73 SGDDEEDGCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKC 252
SG G D+ +CP+C W SEG HR+CC PCGHVYGRSCLE+WL + GK GKC
Sbjct: 138 SGTPHGAGLDKPSVPNCPVCLEMWTSEGLHRVCCIPCGHVYGRSCLERWLHQCGKKIGKC 197
Query: 253 PQCKRKFKQQNIINLYAQLTAVTNDDI 333
PQC RKF+Q+ IINLYA L V NDD+
Sbjct: 198 PQCNRKFRQKEIINLYAPLIVVPNDDL 224
>ref|XP_020094243.1| E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Ananas comosus]
Length = 699
Score = 124 bits (311), Expect = 4e-30
Identities = 52/87 (59%), Positives = 61/87 (70%)
Frame = +1
Query: 73 SGDDEEDGCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKC 252
SG G D+ +CP+C W SEG HR+CC PCGHVYGRSCLE+WL + GK GKC
Sbjct: 138 SGTPHGAGLDKPSVPNCPVCLEMWTSEGLHRVCCIPCGHVYGRSCLERWLHQCGKKIGKC 197
Query: 253 PQCKRKFKQQNIINLYAQLTAVTNDDI 333
PQC RKF+Q+ IINLYA L V NDD+
Sbjct: 198 PQCNRKFRQKEIINLYAPLIVVPNDDL 224
>ref|XP_020094242.1| E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Ananas comosus]
Length = 704
Score = 124 bits (311), Expect = 4e-30
Identities = 52/87 (59%), Positives = 61/87 (70%)
Frame = +1
Query: 73 SGDDEEDGCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKC 252
SG G D+ +CP+C W SEG HR+CC PCGHVYGRSCLE+WL + GK GKC
Sbjct: 138 SGTPHGAGLDKPSVPNCPVCLEMWTSEGLHRVCCIPCGHVYGRSCLERWLHQCGKKIGKC 197
Query: 253 PQCKRKFKQQNIINLYAQLTAVTNDDI 333
PQC RKF+Q+ IINLYA L V NDD+
Sbjct: 198 PQCNRKFRQKEIINLYAPLIVVPNDDL 224
>gb|ONK56982.1| uncharacterized protein A4U43_C10F15330 [Asparagus officinalis]
Length = 759
Score = 122 bits (307), Expect = 1e-29
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = +1
Query: 79 DDEEDG-----CDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNT 243
++EE+G C+QS G DCPIC SW S+G HRICC PCGH+YGRSCLE+WL+RH + +
Sbjct: 116 EEEEEGNGIESCNQSCGADCPICLLSWNSDGPHRICCIPCGHIYGRSCLEQWLQRHQRKS 175
Query: 244 GKCPQCKRKFKQQNIINLYAQLTAVTNDDI 333
KCPQC R+ +Q IINLY T V N +
Sbjct: 176 AKCPQCNRQCRQSEIINLYLPTTVVPNGSL 205
Score = 121 bits (304), Expect = 4e-29
Identities = 51/81 (62%), Positives = 58/81 (71%)
Frame = +1
Query: 88 EDGCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKR 267
E DQ +CPIC W SEG HR+CC PCGHVYG+ CLEKWL+R K+ GKCPQC R
Sbjct: 295 ESQLDQPATANCPICMEPWTSEGPHRVCCIPCGHVYGKCCLEKWLRRCRKSDGKCPQCNR 354
Query: 268 KFKQQNIINLYAQLTAVTNDD 330
KFKQ+ IINLYA L V +DD
Sbjct: 355 KFKQKEIINLYAPLVVVPHDD 375
>ref|XP_020704726.1| E3 ubiquitin-protein ligase RFWD3-like, partial [Dendrobium
catenatum]
Length = 218
Score = 112 bits (281), Expect = 3e-28
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +1
Query: 94 GCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKF 273
G D S CPIC W +G HR+CC PCGHVYGRSCLEKW+K+ K+ KCPQC +F
Sbjct: 105 GSDPSCLPSCPICLVPWTPDGPHRVCCIPCGHVYGRSCLEKWIKQCKKSAAKCPQCSARF 164
Query: 274 KQQNIINLYAQLTAVTNDDI 333
KQ +INLYA L A+TN D+
Sbjct: 165 KQTEMINLYAPLIAITNTDL 184
>ref|XP_010918610.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD3
[Elaeis guineensis]
Length = 673
Score = 118 bits (295), Expect = 6e-28
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +1
Query: 100 DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQ 279
D+S +CPICF W S+G HR+ C PCGHVYGRSCLE+WL + GK TGKCPQC R FK+
Sbjct: 160 DRSISPNCPICFDMWTSDGPHRVSCIPCGHVYGRSCLERWLDQCGKKTGKCPQCNRNFKR 219
Query: 280 QNIINLYAQLTAVTNDDI 333
+ IIN+YA L V NDD+
Sbjct: 220 KEIINVYAPLIVVPNDDL 237
>ref|XP_020167038.1| E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Aegilops
tauschii subsp. tauschii]
Length = 593
Score = 112 bits (281), Expect = 4e-26
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 11/102 (10%)
Frame = +1
Query: 61 QMELSGDDEEDGCDQSGGGD-----------CPICFRSWKSEGRHRICCTPCGHVYGRSC 207
Q+ S EEDG +++G GD CP+C +W ++G HR+ C PCGHVYGRSC
Sbjct: 86 QVSSSSSGEEDG-EEAGDGDDEDAEGPLLPSCPVCMNAWTADGEHRVSCIPCGHVYGRSC 144
Query: 208 LEKWLKRHGKNTGKCPQCKRKFKQQNIINLYAQLTAVTNDDI 333
LEKWL + GK + CPQC + F+Q+NIINLYA V N+D+
Sbjct: 145 LEKWLAQCGKKSATCPQCGKMFRQKNIINLYAPEIVVPNNDL 186
>ref|XP_020167037.1| E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Aegilops
tauschii subsp. tauschii]
Length = 608
Score = 112 bits (281), Expect = 4e-26
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 11/102 (10%)
Frame = +1
Query: 61 QMELSGDDEEDGCDQSGGGD-----------CPICFRSWKSEGRHRICCTPCGHVYGRSC 207
Q+ S EEDG +++G GD CP+C +W ++G HR+ C PCGHVYGRSC
Sbjct: 86 QVSSSSSGEEDG-EEAGDGDDEDAEGPLLPSCPVCMNAWTADGEHRVSCIPCGHVYGRSC 144
Query: 208 LEKWLKRHGKNTGKCPQCKRKFKQQNIINLYAQLTAVTNDDI 333
LEKWL + GK + CPQC + F+Q+NIINLYA V N+D+
Sbjct: 145 LEKWLAQCGKKSATCPQCGKMFRQKNIINLYAPEIVVPNNDL 186
>ref|XP_020703254.1| E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Dendrobium
catenatum]
Length = 610
Score = 112 bits (281), Expect = 4e-26
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +1
Query: 94 GCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKF 273
G D S CPIC W +G HR+CC PCGHVYGRSCLEKW+K+ K+ KCPQC +F
Sbjct: 105 GSDPSCLPSCPICLVPWTPDGPHRVCCIPCGHVYGRSCLEKWIKQCKKSAAKCPQCSARF 164
Query: 274 KQQNIINLYAQLTAVTNDDI 333
KQ +INLYA L A+TN D+
Sbjct: 165 KQTEMINLYAPLIAITNTDL 184
>ref|XP_020703253.1| E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Dendrobium
catenatum]
Length = 619
Score = 112 bits (281), Expect = 4e-26
Identities = 47/80 (58%), Positives = 56/80 (70%)
Frame = +1
Query: 94 GCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKF 273
G D S CPIC W +G HR+CC PCGHVYGRSCLEKW+K+ K+ KCPQC +F
Sbjct: 105 GSDPSCLPSCPICLVPWTPDGPHRVCCIPCGHVYGRSCLEKWIKQCKKSAAKCPQCSARF 164
Query: 274 KQQNIINLYAQLTAVTNDDI 333
KQ +INLYA L A+TN D+
Sbjct: 165 KQTEMINLYAPLIAITNTDL 184
>ref|XP_020248012.1| uncharacterized protein LOC109825566 [Asparagus officinalis]
Length = 292
Score = 108 bits (269), Expect = 1e-25
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = +1
Query: 58 NQMELSGDDEE-------DGCDQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEK 216
N ME++G + E D D +C ICF+ W + G HR+CC PCGHV+G+SCL
Sbjct: 113 NWMEINGGEREQTEEIDGDNVDFDRSANCTICFKPWTANGPHRVCCLPCGHVHGKSCLVT 172
Query: 217 WLKRHGKNTGKCPQCKRKFKQQNIINLYAQLTAVTNDDI 333
WL+R G+ GKCPQC R+ +Q IINLY T V N +
Sbjct: 173 WLQRRGETNGKCPQCNRQCRQSEIINLYLPTTVVPNGSL 211
>gb|OQU93429.1| hypothetical protein SORBI_3001G538100 [Sorghum bicolor]
Length = 610
Score = 111 bits (278), Expect = 1e-25
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = +1
Query: 100 DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQ 279
+++ CP+C W S+G HRI C PCGHVYGRSCLEKWL +HG + KCPQC ++FK
Sbjct: 119 ERANTSTCPVCMDLWTSQGPHRISCIPCGHVYGRSCLEKWLTQHGNRSAKCPQCAKRFKH 178
Query: 280 QNIINLYAQLTAVTNDDI 333
++IINLYAQ A+ N +I
Sbjct: 179 KDIINLYAQEVAIPNSEI 196
>ref|XP_002468674.1| E3 ubiquitin-protein ligase RFWD3 [Sorghum bicolor]
gb|EER95672.1| hypothetical protein SORBI_3001G538100 [Sorghum bicolor]
Length = 611
Score = 111 bits (278), Expect = 1e-25
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = +1
Query: 100 DQSGGGDCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQ 279
+++ CP+C W S+G HRI C PCGHVYGRSCLEKWL +HG + KCPQC ++FK
Sbjct: 119 ERANTSTCPVCMDLWTSQGPHRISCIPCGHVYGRSCLEKWLTQHGNRSAKCPQCAKRFKH 178
Query: 280 QNIINLYAQLTAVTNDDI 333
++IINLYAQ A+ N +I
Sbjct: 179 KDIINLYAQEVAIPNSEI 196
>gb|ONL92732.1| Transducin/WD40 repeat-like superfamily protein [Zea mays]
Length = 212
Score = 105 bits (263), Expect = 1e-25
Identities = 42/72 (58%), Positives = 53/72 (73%)
Frame = +1
Query: 118 DCPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQQNIINL 297
+CP+C W S+G HRI C PCGHVYGRSCLEKWL + G + CPQC ++FK ++IINL
Sbjct: 110 NCPVCMDPWTSQGPHRISCIPCGHVYGRSCLEKWLTQRGNRSATCPQCGKRFKHKDIINL 169
Query: 298 YAQLTAVTNDDI 333
YAQ AV N ++
Sbjct: 170 YAQEVAVPNSEL 181
>gb|EAZ25299.1| hypothetical protein OsJ_09109 [Oryza sativa Japonica Group]
Length = 238
Score = 106 bits (264), Expect = 2e-25
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +1
Query: 121 CPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQQNIINLY 300
CP+C +W S+G HRICC PCGH+YGRSCLE+WL+ G + CPQC ++F+ ++I NLY
Sbjct: 89 CPVCMEAWASQGAHRICCIPCGHIYGRSCLERWLRHKGNTSATCPQCGKRFRPKDITNLY 148
Query: 301 AQLTAVTNDDI 333
A AV N+D+
Sbjct: 149 APEVAVPNNDL 159
>ref|XP_020587615.1| E3 ubiquitin-protein ligase RFWD3-like [Phalaenopsis equestris]
ref|XP_020587616.1| E3 ubiquitin-protein ligase RFWD3-like [Phalaenopsis equestris]
Length = 589
Score = 110 bits (275), Expect = 2e-25
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +1
Query: 121 CPICFRSWKSEGRHRICCTPCGHVYGRSCLEKWLKRHGKNTGKCPQCKRKFKQQNIINLY 300
CPIC W +G HR+CC PCGHVYGRSCLE+W+KR KN KCPQC +FKQ +INLY
Sbjct: 115 CPICLVPWTPDGAHRVCCIPCGHVYGRSCLERWMKRCKKNVAKCPQCSARFKQTEMINLY 174
Query: 301 AQLTAVTNDDI 333
A L AV++ D+
Sbjct: 175 APLIAVSDTDL 185