BLASTX nr result
ID: Ophiopogon24_contig00029779
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00029779
(531 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020267223.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 190 4e-53
ref|XP_010923559.1| PREDICTED: mediator of RNA polymerase II tra... 164 7e-44
ref|XP_008791235.1| PREDICTED: mediator of RNA polymerase II tra... 164 1e-43
gb|PKA55557.1| Mediator of RNA polymerase II transcription subun... 164 1e-43
gb|PKU65011.1| Mediator of RNA polymerase II transcription subun... 162 1e-43
gb|ONM21491.1| Mediator of RNA polymerase II transcription subun... 149 2e-43
ref|XP_020703758.1| mediator of RNA polymerase II transcription ... 162 3e-43
gb|ONM21472.1| Mediator of RNA polymerase II transcription subun... 150 8e-42
ref|XP_012699570.1| mediator of RNA polymerase II transcription ... 158 2e-41
gb|OAY82546.1| Mediator of RNA polymerase II transcription subun... 155 7e-41
ref|XP_010923554.1| PREDICTED: mediator of RNA polymerase II tra... 156 8e-41
ref|XP_020172435.1| mediator of RNA polymerase II transcription ... 156 8e-41
ref|XP_020098667.1| mediator of RNA polymerase II transcription ... 155 1e-40
gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticu... 154 2e-40
gb|AMW92181.1| mediator complex subunit 25 [Triticum aestivum] 154 3e-40
gb|AMW92182.1| mediator complex subunit 25 [Triticum aestivum] 154 3e-40
gb|AMW92183.1| mediator complex subunit 25 [Triticum aestivum] 154 3e-40
gb|PAN11835.1| hypothetical protein PAHAL_B02258 [Panicum hallii] 154 4e-40
gb|ONM21493.1| Mediator of RNA polymerase II transcription subun... 150 2e-39
gb|EEE69415.1| hypothetical protein OsJ_28785 [Oryza sativa Japo... 152 2e-39
>ref|XP_020267223.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 25 [Asparagus officinalis]
Length = 798
Score = 190 bits (482), Expect = 4e-53
Identities = 95/126 (75%), Positives = 102/126 (80%)
Frame = +1
Query: 154 LNSLGLSLEISMTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGAT 333
L+ LGL+ SM EKQLIVAVEGTAALGPYWPT+VTDYL+KIIR FCGNELNGQKLSG T
Sbjct: 2 LHLLGLN-NSSMAEKQLIVAVEGTAALGPYWPTIVTDYLDKIIRCFCGNELNGQKLSGQT 60
Query: 334 PKLALVVFNMHGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMM 513
P+LALVVFN HGPYSAFMVQ+SGWTKDMDAF WLSGIPFGGGGFS MM
Sbjct: 61 PELALVVFNTHGPYSAFMVQRSGWTKDMDAFLHWLSGIPFGGGGFSEAVIAEGLAEALMM 120
Query: 514 FLVNPN 531
F V+ N
Sbjct: 121 FPVSLN 126
>ref|XP_010923559.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Elaeis guineensis]
Length = 816
Score = 164 bits (416), Expect = 7e-44
Identities = 78/115 (67%), Positives = 88/115 (76%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M EKQLIVAVEGTAALGPYW T+++DYL+KIIR F GNEL GQKLSGA P+ ALVVFN H
Sbjct: 1 MAEKQLIVAVEGTAALGPYWQTILSDYLDKIIRCFYGNELTGQKLSGAHPEFALVVFNTH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
GP+S+F+V SGWTKD+D FF+WLSGIPF GGGFS MMF PN
Sbjct: 61 GPHSSFIVHHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMMFPFTPN 115
>ref|XP_008791235.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Phoenix dactylifera]
Length = 809
Score = 164 bits (415), Expect = 1e-43
Identities = 78/115 (67%), Positives = 88/115 (76%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M EKQLIVAVEGTAALGPYW +++DYL+KIIR F GNEL GQKLSGA P+ ALVVFN H
Sbjct: 1 MAEKQLIVAVEGTAALGPYWSIILSDYLDKIIRCFYGNELTGQKLSGAHPEFALVVFNTH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
GP+S+F+VQ SGWTKD+D FF+WLSGIPF GGGFS MMF PN
Sbjct: 61 GPHSSFIVQHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMMFPFTPN 115
>gb|PKA55557.1| Mediator of RNA polymerase II transcription subunit 25 [Apostasia
shenzhenica]
Length = 756
Score = 164 bits (414), Expect = 1e-43
Identities = 77/115 (66%), Positives = 87/115 (75%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M EKQLIV VEGTAALGPYW TVV+DYLEKIIR FCGNEL+GQKL+GA P+LAL+VFN H
Sbjct: 1 MAEKQLIVIVEGTAALGPYWQTVVSDYLEKIIRCFCGNELSGQKLAGANPELALIVFNTH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
GPYSAF+VQ+SGWTKD+D F WL +PF GGGF MMF + N
Sbjct: 61 GPYSAFLVQRSGWTKDVDVFLLWLLRVPFSGGGFGDVAIAEGLSEALMMFAIPTN 115
>gb|PKU65011.1| Mediator of RNA polymerase II transcription subunit 25 [Dendrobium
catenatum]
Length = 603
Score = 162 bits (410), Expect = 1e-43
Identities = 77/115 (66%), Positives = 86/115 (74%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M EKQLIV VEGTAALGPYW VV+DYLEKI+R FCGNELNGQKLSGA P+LALVVFN H
Sbjct: 1 MAEKQLIVVVEGTAALGPYWQIVVSDYLEKIVRYFCGNELNGQKLSGANPELALVVFNSH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
GPYSAF+VQ++GWTKD+D F WLS + F GGGF MF V+ N
Sbjct: 61 GPYSAFLVQRTGWTKDLDVFLGWLSRVQFSGGGFGDAAIAEGLSDALTMFTVSTN 115
>gb|ONM21491.1| Mediator of RNA polymerase II transcription subunit 25 [Zea mays]
Length = 114
Score = 149 bits (377), Expect = 2e-43
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = +1
Query: 181 ISMTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFN 360
++ ++QL+VAVEGTAALGPYW T+V +Y+EKI+RSFC +EL GQKL G P+LALVVF+
Sbjct: 1 MAAADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFH 60
Query: 361 MHGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
HGPYSAF VQ+SGWTKD+DAF WLSGI F GGGFS
Sbjct: 61 THGPYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFS 97
>ref|XP_020703758.1| mediator of RNA polymerase II transcription subunit 25-like
[Dendrobium catenatum]
Length = 725
Score = 162 bits (410), Expect = 3e-43
Identities = 77/115 (66%), Positives = 86/115 (74%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M EKQLIV VEGTAALGPYW VV+DYLEKI+R FCGNELNGQKLSGA P+LALVVFN H
Sbjct: 1 MAEKQLIVVVEGTAALGPYWQIVVSDYLEKIVRYFCGNELNGQKLSGANPELALVVFNSH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
GPYSAF+VQ++GWTKD+D F WLS + F GGGF MF V+ N
Sbjct: 61 GPYSAFLVQRTGWTKDLDVFLGWLSRVQFSGGGFGDAAIAEGLSDALTMFTVSTN 115
>gb|ONM21472.1| Mediator of RNA polymerase II transcription subunit 25 [Zea mays]
Length = 273
Score = 150 bits (379), Expect = 8e-42
Identities = 71/117 (60%), Positives = 86/117 (73%)
Frame = +1
Query: 181 ISMTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFN 360
++ ++QL+VAVEGTAALGPYW T+V +Y+EKI+RSFC +EL GQKL G P+LALVVF+
Sbjct: 1 MAAADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFH 60
Query: 361 MHGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
HGPYSAF VQ+SGWTKD+DAF WLSGI F GGGFS + NPN
Sbjct: 61 THGPYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPN 117
>ref|XP_012699570.1| mediator of RNA polymerase II transcription subunit 25 [Setaria
italica]
gb|KQL24066.1| hypothetical protein SETIT_028886mg [Setaria italica]
Length = 881
Score = 158 bits (399), Expect = 2e-41
Identities = 74/113 (65%), Positives = 87/113 (76%)
Frame = +1
Query: 193 EKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHGP 372
E+QL+VAVEGTAALGPYW T+V DY+EKI+RSFC NE+ GQKL+GA P+LALVVF+ HGP
Sbjct: 7 ERQLVVAVEGTAALGPYWSTIVGDYVEKIVRSFCANEVPGQKLAGAPPELALVVFHTHGP 66
Query: 373 YSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
YSAF VQ+SGWTKD+D+F WLSGIPF GGGFS M+ PN
Sbjct: 67 YSAFGVQRSGWTKDIDSFLSWLSGIPFSGGGFSEASTCEGLAEALMILQGTPN 119
>gb|OAY82546.1| Mediator of RNA polymerase II transcription subunit 25 [Ananas
comosus]
Length = 710
Score = 155 bits (393), Expect = 7e-41
Identities = 74/116 (63%), Positives = 87/116 (75%)
Frame = +1
Query: 184 SMTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNM 363
+M E+QLIV VEGTAALGPYW T+++DYLEKIIRSF NELNGQK+SGA P+ A+V+FN
Sbjct: 61 AMAERQLIVVVEGTAALGPYWSTILSDYLEKIIRSFSANELNGQKISGAGPEFAMVIFNT 120
Query: 364 HGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
HG SAF VQ+SGWTKD D F RWLSGIPF GGGF+ +MF + PN
Sbjct: 121 HGALSAFTVQRSGWTKDPDVFLRWLSGIPFIGGGFNDTATAEGLADALVMFPLPPN 176
>ref|XP_010923554.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X1 [Elaeis guineensis]
Length = 827
Score = 156 bits (394), Expect = 8e-41
Identities = 78/126 (61%), Positives = 88/126 (69%), Gaps = 11/126 (8%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQ-----------KLSGAT 333
M EKQLIVAVEGTAALGPYW T+++DYL+KIIR F GNEL GQ KLSGA
Sbjct: 1 MAEKQLIVAVEGTAALGPYWQTILSDYLDKIIRCFYGNELTGQVDILLPRLVFKKLSGAH 60
Query: 334 PKLALVVFNMHGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMM 513
P+ ALVVFN HGP+S+F+V SGWTKD+D FF+WLSGIPF GGGFS MM
Sbjct: 61 PEFALVVFNTHGPHSSFIVHHSGWTKDLDVFFQWLSGIPFSGGGFSEAAIAEGLAEALMM 120
Query: 514 FLVNPN 531
F PN
Sbjct: 121 FPFTPN 126
>ref|XP_020172435.1| mediator of RNA polymerase II transcription subunit 25 [Aegilops
tauschii subsp. tauschii]
Length = 830
Score = 156 bits (394), Expect = 8e-41
Identities = 69/94 (73%), Positives = 82/94 (87%)
Frame = +1
Query: 190 TEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHG 369
+E+QL+VAVEGTAALGPYWP + +Y+EKI+RSFC EL+GQKL+G P+LALVVF+ HG
Sbjct: 7 SERQLVVAVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 370 PYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
PYSAF+VQ+SGWTKDMDAF WLSGI F GGGFS
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFS 100
>ref|XP_020098667.1| mediator of RNA polymerase II transcription subunit 25 isoform X1
[Ananas comosus]
Length = 793
Score = 155 bits (392), Expect = 1e-40
Identities = 74/115 (64%), Positives = 86/115 (74%)
Frame = +1
Query: 187 MTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMH 366
M E+QLIV VEGTAALGPYW T+++DYLEKIIRSF NELNGQK+SGA P+ A+V+FN H
Sbjct: 1 MAERQLIVVVEGTAALGPYWSTILSDYLEKIIRSFSANELNGQKISGAGPEFAMVIFNTH 60
Query: 367 GPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
G SAF VQ+SGWTKD D F RWLSGIPF GGGF+ +MF + PN
Sbjct: 61 GALSAFTVQRSGWTKDPDVFLRWLSGIPFIGGGFNDTATAEGLADALVMFPLPPN 115
>gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticum aestivum]
Length = 759
Score = 154 bits (390), Expect = 2e-40
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +1
Query: 190 TEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHG 369
+E+QL+V VEGTAALGPYWP + +Y+EKI+RSFC EL+GQKL+G P+LALVVF+ HG
Sbjct: 7 SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 370 PYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
PYSAF+VQ+SGWTKDMDAF WLSGI F GGGFS
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFS 100
>gb|AMW92181.1| mediator complex subunit 25 [Triticum aestivum]
Length = 827
Score = 154 bits (390), Expect = 3e-40
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +1
Query: 190 TEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHG 369
+E+QL+V VEGTAALGPYWP + +Y+EKI+RSFC EL+GQKL+G P+LALVVF+ HG
Sbjct: 7 SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 370 PYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
PYSAF+VQ+SGWTKDMDAF WLSGI F GGGFS
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFS 100
>gb|AMW92182.1| mediator complex subunit 25 [Triticum aestivum]
Length = 829
Score = 154 bits (390), Expect = 3e-40
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +1
Query: 190 TEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHG 369
+E+QL+V VEGTAALGPYWP + +Y+EKI+RSFC EL+GQKL+G P+LALVVF+ HG
Sbjct: 7 SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 370 PYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
PYSAF+VQ+SGWTKDMDAF WLSGI F GGGFS
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFS 100
>gb|AMW92183.1| mediator complex subunit 25 [Triticum aestivum]
Length = 830
Score = 154 bits (390), Expect = 3e-40
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = +1
Query: 190 TEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHG 369
+E+QL+V VEGTAALGPYWP + +Y+EKI+RSFC EL+GQKL+G P+LALVVF+ HG
Sbjct: 7 SERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHG 66
Query: 370 PYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
PYSAF+VQ+SGWTKDMDAF WLSGI F GGGFS
Sbjct: 67 PYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFS 100
>gb|PAN11835.1| hypothetical protein PAHAL_B02258 [Panicum hallii]
Length = 904
Score = 154 bits (389), Expect = 4e-40
Identities = 71/93 (76%), Positives = 82/93 (88%)
Frame = +1
Query: 193 EKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHGP 372
E+QL+VAVEGTAALGPYW T+V DY+EKI+RSFC NE+ GQKL+GA P+LALVVF+ HGP
Sbjct: 8 ERQLVVAVEGTAALGPYWSTIVGDYVEKIVRSFCVNEVPGQKLAGAPPELALVVFHTHGP 67
Query: 373 YSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
YSAF VQ+SGWTKD+DAF WLSGI F GGGFS
Sbjct: 68 YSAFGVQRSGWTKDIDAFLSWLSGISFSGGGFS 100
>gb|ONM21493.1| Mediator of RNA polymerase II transcription subunit 25 [Zea mays]
Length = 568
Score = 150 bits (379), Expect = 2e-39
Identities = 71/117 (60%), Positives = 86/117 (73%)
Frame = +1
Query: 181 ISMTEKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFN 360
++ ++QL+VAVEGTAALGPYW T+V +Y+EKI+RSFC +EL GQKL G P+LALVVF+
Sbjct: 1 MAAADRQLVVAVEGTAALGPYWSTIVAEYVEKIVRSFCASELPGQKLVGTPPELALVVFH 60
Query: 361 MHGPYSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFSXXXXXXXXXXXXMMFLVNPN 531
HGPYSAF VQ+SGWTKD+DAF WLSGI F GGGFS + NPN
Sbjct: 61 THGPYSAFDVQRSGWTKDVDAFLSWLSGILFSGGGFSEASTCEGLAEALKILQGNPN 117
>gb|EEE69415.1| hypothetical protein OsJ_28785 [Oryza sativa Japonica Group]
Length = 839
Score = 152 bits (383), Expect = 2e-39
Identities = 68/93 (73%), Positives = 79/93 (84%)
Frame = +1
Query: 193 EKQLIVAVEGTAALGPYWPTVVTDYLEKIIRSFCGNELNGQKLSGATPKLALVVFNMHGP 372
E+QL+VAVEGTAALGPYWP V DY+EKI+RSFC +E+ GQKL+G P+LALVVF+ HGP
Sbjct: 7 ERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHGP 66
Query: 373 YSAFMVQQSGWTKDMDAFFRWLSGIPFGGGGFS 471
YSAF VQ+SGWTKDM+ F WLSGI F GGGFS
Sbjct: 67 YSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFS 99