BLASTX nr result
ID: Ophiopogon24_contig00029701
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00029701
(524 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus... 65 4e-10
ref|XP_020585458.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 65 3e-09
ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 65 5e-09
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 65 5e-09
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 64 9e-09
ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II tra... 62 4e-08
ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II tra... 62 4e-08
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 62 6e-08
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 62 6e-08
gb|POF07329.1| mediator of rna polymerase ii transcription subun... 61 8e-08
gb|POE87032.1| mediator of rna polymerase ii transcription subun... 61 1e-07
ref|XP_023871507.1| mediator of RNA polymerase II transcription ... 61 1e-07
ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_020108026.1| mediator of RNA polymerase II transcription ... 61 1e-07
gb|OAY79976.1| Mediator of RNA polymerase II transcription subun... 61 1e-07
ref|XP_020108025.1| mediator of RNA polymerase II transcription ... 61 1e-07
ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II tra... 61 1e-07
ref|XP_008244324.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-07
ref|XP_020695037.1| mediator of RNA polymerase II transcription ... 60 4e-07
ref|XP_020695036.1| mediator of RNA polymerase II transcription ... 60 4e-07
>gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus officinalis]
Length = 146
Score = 65.1 bits (157), Expect = 4e-10
Identities = 34/62 (54%), Positives = 37/62 (59%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYV CL+GLLV FVP WVP IRKETL +L NGL+ W TAVVES
Sbjct: 85 AYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSWRESELALQLLERGGPEAFTAVVES 144
Query: 343 LL 338
LL
Sbjct: 145 LL 146
>ref|XP_020585458.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Phalaenopsis equestris]
Length = 451
Score = 65.5 bits (158), Expect = 3e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AYVSC++GLLV FVPAW+PEIRK TLR+L GLRGW
Sbjct: 386 AYVSCILGLLVNFVPAWIPEIRKGTLRKLAAGLRGW 421
>ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Asparagus officinalis]
Length = 1070
Score = 65.1 bits (157), Expect = 5e-09
Identities = 34/62 (54%), Positives = 37/62 (59%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYV CL+GLLV FVP WVP IRKETL +L NGL+ W TAVVES
Sbjct: 1009 AYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSWRESELALQLLERGGPEAFTAVVES 1068
Query: 343 LL 338
LL
Sbjct: 1069 LL 1070
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 65.1 bits (157), Expect = 5e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV FVP WVPE+++ TLR+L +GLRGW + AVVES
Sbjct: 1270 AYVSCFVGLLVSFVPTWVPEVKQLTLRKLASGLRGWHECDLALSLLERGGPAAMDAVVES 1329
Query: 343 LL 338
+L
Sbjct: 1330 VL 1331
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 64.3 bits (155), Expect = 9e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV F PAWV E+++ETLR+L +GLRGW +TAVVE
Sbjct: 1269 AYVSCFVGLLVKFAPAWVHEVKQETLRKLASGLRGWHECDLALSLLERGGPSSMTAVVEY 1328
Query: 343 LL 338
+L
Sbjct: 1329 ML 1330
>ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Phoenix dactylifera]
Length = 762
Score = 62.4 bits (150), Expect = 4e-08
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV FVP WVPE+++ TL +L +GLRGW + A+VES
Sbjct: 701 AYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGWHEYDLALSLLERGGPAAMDALVES 760
Query: 343 LL 338
+L
Sbjct: 761 VL 762
>ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Phoenix dactylifera]
Length = 818
Score = 62.4 bits (150), Expect = 4e-08
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV FVP WVPE+++ TL +L +GLRGW + A+VES
Sbjct: 757 AYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGWHEYDLALSLLERGGPAAMDALVES 816
Query: 343 LL 338
+L
Sbjct: 817 VL 818
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 62.0 bits (149), Expect = 6e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV FVP WVPE+++ TL +L +GLRGW + AVVES
Sbjct: 1270 AYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGWHECDLALSLLEHGGPAAMDAVVES 1329
Query: 343 LL 338
+L
Sbjct: 1330 VL 1331
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 62.0 bits (149), Expect = 6e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV FVP WVPE+++ TL +L +GLRGW + AVVES
Sbjct: 1291 AYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGWHECDLALSLLEHGGPAAMDAVVES 1350
Query: 343 LL 338
+L
Sbjct: 1351 VL 1352
>gb|POF07329.1| mediator of rna polymerase ii transcription subunit 33b [Quercus
suber]
Length = 369
Score = 61.2 bits (147), Expect = 8e-08
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AY+SCLVGL+V F P+W+ E++ ETLR+L NGLRGW
Sbjct: 305 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 340
>gb|POE87032.1| mediator of rna polymerase ii transcription subunit 33a [Quercus
suber]
Length = 1291
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AY+SCLVGL+V F P+W+ E++ ETLR+L NGLRGW
Sbjct: 1227 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 1262
>ref|XP_023871507.1| mediator of RNA polymerase II transcription subunit 33A-like [Quercus
suber]
Length = 1331
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AY+SCLVGL+V F P+W+ E++ ETLR+L NGLRGW
Sbjct: 1267 AYLSCLVGLMVSFTPSWIQEVKLETLRKLANGLRGW 1302
>ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/62 (50%), Positives = 37/62 (59%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV F PAWV E ++E L +L +GLRGW +TAVVES
Sbjct: 1301 AYVSCFVGLLVNFAPAWVLEAKQEALHKLASGLRGWQEFDMALSLLELGGPSAVTAVVES 1360
Query: 343 LL 338
+L
Sbjct: 1361 VL 1362
>ref|XP_020108026.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X2 [Ananas comosus]
Length = 1076
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV +VP WVP+++ +TL++L +GLRGW + AVVES
Sbjct: 1015 AYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAAMGAVVES 1074
Query: 343 LL 338
+L
Sbjct: 1075 VL 1076
>gb|OAY79976.1| Mediator of RNA polymerase II transcription subunit 33A [Ananas
comosus]
Length = 1256
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV +VP WVP+++ +TL++L +GLRGW + AVVES
Sbjct: 1195 AYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAAMGAVVES 1254
Query: 343 LL 338
+L
Sbjct: 1255 VL 1256
>ref|XP_020108025.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X1 [Ananas comosus]
Length = 1304
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGWXXXXXXXXXXXXXXXXXLTAVVES 344
AYVSC VGLLV +VP WVP+++ +TL++L +GLRGW + AVVES
Sbjct: 1243 AYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAAMGAVVES 1302
Query: 343 LL 338
+L
Sbjct: 1303 VL 1304
>ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Nelumbo nucifera]
Length = 1322
Score = 60.8 bits (146), Expect = 1e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AYVSC VGL+V F PAW+ E+R+E LR+L NGLRGW
Sbjct: 1258 AYVSCFVGLVVHFAPAWIQEVRQEILRKLANGLRGW 1293
>ref|XP_008244324.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Prunus mume]
Length = 1323
Score = 60.1 bits (144), Expect = 3e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -2
Query: 523 AYVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
AYVSCLVGL+V F PAW+ E++ ETL++L GLRGW
Sbjct: 1257 AYVSCLVGLMVNFAPAWIQEVKVETLKKLAGGLRGW 1292
>ref|XP_020695037.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X4 [Dendrobium catenatum]
Length = 1065
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 520 YVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
YVSCL+GLLV FVP+W+PEIRK TLR+L GLR W
Sbjct: 1005 YVSCLLGLLVRFVPSWIPEIRKGTLRKLAAGLRRW 1039
>ref|XP_020695036.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X3 [Dendrobium catenatum]
Length = 1279
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -2
Query: 520 YVSCLVGLLVGFVPAWVPEIRKETLRRLTNGLRGW 416
YVSCL+GLLV FVP+W+PEIRK TLR+L GLR W
Sbjct: 1219 YVSCLLGLLVRFVPSWIPEIRKGTLRKLAAGLRRW 1253