BLASTX nr result

ID: Ophiopogon24_contig00029633 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029633
         (797 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260151.1| uncharacterized protein LOC109836606 isoform...   100   4e-20
ref|XP_020260150.1| uncharacterized protein LOC109836606 isoform...   100   4e-20
ref|XP_020260147.1| uncharacterized protein LOC109836606 isoform...   100   4e-20
ref|XP_024170311.1| replication protein A 70 kDa DNA-binding sub...    64   8e-08
gb|PRQ19099.1| putative transcription factor interactor and regu...    64   8e-08
gb|KZM88547.1| hypothetical protein DCAR_025622 [Daucus carota s...    59   3e-06
gb|KZM80597.1| hypothetical protein DCAR_032054 [Daucus carota s...    59   4e-06
ref|XP_017228584.1| PREDICTED: replication protein A 70 kDa DNA-...    59   4e-06
gb|KZN01988.1| hypothetical protein DCAR_010742 [Daucus carota s...    58   5e-06
gb|KZM81075.1| hypothetical protein DCAR_031299 [Daucus carota s...    58   9e-06

>ref|XP_020260151.1| uncharacterized protein LOC109836606 isoform X3 [Asparagus
           officinalis]
          Length = 576

 Score =  100 bits (248), Expect = 4e-20
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
 Frame = -2

Query: 550 ILQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYK-CPLCWTAIHEGKTYPSG 374
           ++ TI+ L+  T   P PG+D  + I+AT+ R+  E ++ Y+ C +C   +    +   G
Sbjct: 364 VIYTISQLRALTSSPPIPGKDLYYTIRATISRIYTELSMTYRACAMCPKRMKYEVSDQYG 423

Query: 373 CPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGE 194
           CP  S  N+ G TT RYK+ + I D T R +L +F+  AE++ + ++ ++  L  E+NG 
Sbjct: 424 CPNPSCANRQGNTTSRYKITIDIKDDTDRLNLVIFNHDAEKIIHISAPELENLKLEDNGL 483

Query: 193 TKVINLVRQVIDKRFIFYIRVXXXXXXXXXXXXXXXXTAESIEWIPRAYNPALKT 29
            K+ NL+ +   K F F  R                 T  S++W PRA+NP   T
Sbjct: 484 CKIHNLITKAHGKEFKFAFR---HDYTNHKYSLKGQYTVSSLDWSPRAFNPMRNT 535


>ref|XP_020260150.1| uncharacterized protein LOC109836606 isoform X2 [Asparagus
           officinalis]
          Length = 580

 Score =  100 bits (248), Expect = 4e-20
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
 Frame = -2

Query: 550 ILQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYK-CPLCWTAIHEGKTYPSG 374
           ++ TI+ L+  T   P PG+D  + I+AT+ R+  E ++ Y+ C +C   +    +   G
Sbjct: 368 VIYTISQLRALTSSPPIPGKDLYYTIRATISRIYTELSMTYRACAMCPKRMKYEVSDQYG 427

Query: 373 CPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGE 194
           CP  S  N+ G TT RYK+ + I D T R +L +F+  AE++ + ++ ++  L  E+NG 
Sbjct: 428 CPNPSCANRQGNTTSRYKITIDIKDDTDRLNLVIFNHDAEKIIHISAPELENLKLEDNGL 487

Query: 193 TKVINLVRQVIDKRFIFYIRVXXXXXXXXXXXXXXXXTAESIEWIPRAYNPALKT 29
            K+ NL+ +   K F F  R                 T  S++W PRA+NP   T
Sbjct: 488 CKIHNLITKAHGKEFKFAFR---HDYTNHKYSLKGQYTVSSLDWSPRAFNPMRNT 539


>ref|XP_020260147.1| uncharacterized protein LOC109836606 isoform X1 [Asparagus
           officinalis]
 ref|XP_020260148.1| uncharacterized protein LOC109836606 isoform X1 [Asparagus
           officinalis]
 gb|ONK71064.1| uncharacterized protein A4U43_C04F4330 [Asparagus officinalis]
          Length = 581

 Score =  100 bits (248), Expect = 4e-20
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
 Frame = -2

Query: 550 ILQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYK-CPLCWTAIHEGKTYPSG 374
           ++ TI+ L+  T   P PG+D  + I+AT+ R+  E ++ Y+ C +C   +    +   G
Sbjct: 369 VIYTISQLRALTSSPPIPGKDLYYTIRATISRIYTELSMTYRACAMCPKRMKYEVSDQYG 428

Query: 373 CPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGE 194
           CP  S  N+ G TT RYK+ + I D T R +L +F+  AE++ + ++ ++  L  E+NG 
Sbjct: 429 CPNPSCANRQGNTTSRYKITIDIKDDTDRLNLVIFNHDAEKIIHISAPELENLKLEDNGL 488

Query: 193 TKVINLVRQVIDKRFIFYIRVXXXXXXXXXXXXXXXXTAESIEWIPRAYNPALKT 29
            K+ NL+ +   K F F  R                 T  S++W PRA+NP   T
Sbjct: 489 CKIHNLITKAHGKEFKFAFR---HDYTNHKYSLKGQYTVSSLDWSPRAFNPMRNT 540


>ref|XP_024170311.1| replication protein A 70 kDa DNA-binding subunit E [Rosa chinensis]
          Length = 878

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
 Frame = -2

Query: 655  GRTSPCFFRIQTLAQQSVNILSYPQESNCFGRQQLILQTIADLKVATQCLPTPGEDKQFV 476
            GR SPC              +S  + +   GR   I +TI+ +K   + L T  +     
Sbjct: 524  GRNSPC--------------VSISRGTASVGRND-IRKTISQIK--DEKLGTSEKPDWIT 566

Query: 475  IKATVIRVLNETTLIYKCPLCWTAIHEGKTYPSGCPKQSYQNKDG------------QTT 332
            I ATVI V +++     CPL        K     C K+   + DG            Q  
Sbjct: 567  ISATVIFVKSDSYFYAACPL--------KIGERQCNKKVINDGDGTWRCERCEQSVEQCD 618

Query: 331  HRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGETKVINLVRQVIDKR 152
            +RY + L I DHTG A +T F +A EE+   T++D   L  E   E KV  +VR+V+   
Sbjct: 619  YRYILNLQIQDHTGIAWVTAFQEAGEEIMGITAKDFHNLKYEMQDEDKVAEIVRRVLFTE 678

Query: 151  FIFYIRV 131
            F+F +++
Sbjct: 679  FVFKLKI 685


>gb|PRQ19099.1| putative transcription factor interactor and regulator CCHC(Zn)
            family [Rosa chinensis]
          Length = 927

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
 Frame = -2

Query: 655  GRTSPCFFRIQTLAQQSVNILSYPQESNCFGRQQLILQTIADLKVATQCLPTPGEDKQFV 476
            GR SPC              +S  + +   GR   I +TI+ +K   + L T  +     
Sbjct: 573  GRNSPC--------------VSISRGTASVGRND-IRKTISQIK--DEKLGTSEKPDWIT 615

Query: 475  IKATVIRVLNETTLIYKCPLCWTAIHEGKTYPSGCPKQSYQNKDG------------QTT 332
            I ATVI V +++     CPL        K     C K+   + DG            Q  
Sbjct: 616  ISATVIFVKSDSYFYAACPL--------KIGERQCNKKVINDGDGTWRCERCEQSVEQCD 667

Query: 331  HRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGETKVINLVRQVIDKR 152
            +RY + L I DHTG A +T F +A EE+   T++D   L  E   E KV  +VR+V+   
Sbjct: 668  YRYILNLQIQDHTGIAWVTAFQEAGEEIMGITAKDFHNLKYEMQDEDKVAEIVRRVLFTE 727

Query: 151  FIFYIRV 131
            F+F +++
Sbjct: 728  FVFKLKI 734


>gb|KZM88547.1| hypothetical protein DCAR_025622 [Daucus carota subsp. sativus]
          Length = 454

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
 Frame = -2

Query: 508 LPTPGEDKQFVIKATVIRVLNETTLIYK-CPLC--WTAIHEGKTYPSGCPKQSYQNKDGQ 338
           LP  GE  +F+ +A +I V       Y  CP C     I E K Y   C K++    DG 
Sbjct: 284 LPNAGEIMRFICEANIINVSKYDGWYYNSCPKCPKGIRIEENKFYCDACKKET----DGY 339

Query: 337 TTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENGETKVINLVRQVID 158
           T  RYK+ + + D +GR +  L +  AE+L       I+  L ++N    +  ++  +I 
Sbjct: 340 T-QRYKIIIGVQDDSGRTTFALLNNDAEQLIGVPVRSIISDLGQDNLTQDIPPIINNIIG 398

Query: 157 KRFIFYIRV 131
           +R  F ++V
Sbjct: 399 RRCAFEVKV 407


>gb|KZM80597.1| hypothetical protein DCAR_032054 [Daucus carota subsp. sativus]
          Length = 443

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = -2

Query: 559 QQLILQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYKC-PLCWTAIHE--GK 389
           ++L +++I + K+     P        + K T+I VLN     Y C P C  A+ E  GK
Sbjct: 266 KELQIKSILEAKI-----PVGNNVLHCLCKGTIIDVLNGNGWYYICCPKCARAVRELEGK 320

Query: 388 TYPSGCPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLS 209
            Y + C ++ Y       T RY+V + I D TG  +LTLF++ AE++  A    ++K + 
Sbjct: 321 FYCAACTEEPYP-----VTQRYRVVIRIEDGTGSTTLTLFNKEAEQIIGAPLNTLLKEIE 375

Query: 208 EENGETKVINLVRQVIDKRFIFYIRV 131
           +E    ++   ++ +I K+  F I++
Sbjct: 376 KEK-LAEIPPALKNLIGKKCAFQIKI 400


>ref|XP_017228584.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
           [Daucus carota subsp. sativus]
          Length = 492

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = -2

Query: 559 QQLILQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYKC-PLCWTAIHE--GK 389
           ++L +++I + K+     P        + K T+I VLN     Y C P C  A+ E  GK
Sbjct: 315 KELQIKSILEAKI-----PVGNNVLHCLCKGTIIDVLNGNGWYYICCPKCARAVRELEGK 369

Query: 388 TYPSGCPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLS 209
            Y + C ++ Y       T RY+V + I D TG  +LTLF++ AE++  A    ++K + 
Sbjct: 370 FYCAACTEEPYP-----VTQRYRVVIRIEDGTGSTTLTLFNKEAEQIIGAPLNTLLKEIE 424

Query: 208 EENGETKVINLVRQVIDKRFIFYIRV 131
           +E    ++   ++ +I K+  F I++
Sbjct: 425 KEK-LAEIPPALKNLIGKKCAFQIKI 449


>gb|KZN01988.1| hypothetical protein DCAR_010742 [Daucus carota subsp. sativus]
          Length = 447

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
 Frame = -2

Query: 547 LQTIADLKVATQCLPTPGEDKQFVIKATVIRVLNETTLIYK-CPLCWTAIH--EGKTYPS 377
           +QTI D +     LP   +  +FV +AT++ +       Y  CP C   I    G  Y  
Sbjct: 272 IQTILDAQ-----LPDDKKVMRFVCEATIVDISKYDGWYYNSCPTCPRKIRFEHGNLYCD 326

Query: 376 GCPKQSYQNKDGQTTHRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKLLSEENG 197
           GC K++     G    RYK+ + + D T + + TLF++ A+ L  A  + I+  + ++  
Sbjct: 327 GCTKET-----GDYVQRYKITVHVKDDTAKTTFTLFNKEAQRLIGAPIQTIIAEIGQDKI 381

Query: 196 ETKVINLVRQVIDKRFIFYIRV 131
            + +  LV+ V  K+ +F ++V
Sbjct: 382 TSDIPVLVKNVKGKKCVFEVKV 403


>gb|KZM81075.1| hypothetical protein DCAR_031299 [Daucus carota subsp. sativus]
          Length = 753

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
 Frame = -2

Query: 559 QQLILQTIADLKVATQCLPTPGEDK-QFVIKATVIRVLNETTLIYKC-PLCWTAIH--EG 392
           +QL ++ + D+++       PG+D+ + +  AT+  ++     +Y C   C  A+H  EG
Sbjct: 195 KQLHIKDVLDMEIP------PGKDQVRGLCTATITGIMEGNGWLYNCCSKCARAVHPTEG 248

Query: 391 KTYPSGCPKQSYQNKDGQT-THRYKVRLAILDHTGRASLTLFSQAAEELFNATSEDIMKL 215
           K + + C      N D  T + RY+V  AI D TG  ++TLF++ AE+L  A  + ++K 
Sbjct: 249 KYFCAAC------NDDNITVSQRYRVIAAIKDDTGTTTVTLFNKEAEQLIGAPIQKLIKE 302

Query: 214 LSEENGETKVINLVRQVIDKRFIFYIRV 131
           L+E     ++   V+ ++ K   F I++
Sbjct: 303 LTEGTDLEEIPPSVKNIVGKLCAFQIKI 330


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