BLASTX nr result

ID: Ophiopogon24_contig00029629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029629
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272888.1| kinesin-like protein KIN-12E isoform X1 [Asp...    36   6e-06
gb|ONK63044.1| uncharacterized protein A4U43_C07F10830, partial ...    36   6e-06

>ref|XP_020272888.1| kinesin-like protein KIN-12E isoform X1 [Asparagus officinalis]
 ref|XP_020272889.1| kinesin-like protein KIN-12E isoform X1 [Asparagus officinalis]
 ref|XP_020272891.1| kinesin-like protein KIN-12E isoform X1 [Asparagus officinalis]
          Length = 2125

 Score = 35.8 bits (81), Expect(3) = 6e-06
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 233 KTHFNSIQDPSQHSIPS-QIDLGFYKGARSTPKSIQIITERSRSRV 99
           ++  +SI DPSQ S    QID    KGA  TPKS+QI   R  SRV
Sbjct: 34  RSPLSSIHDPSQISANGLQIDPFSVKGAGLTPKSVQIAAARCGSRV 79



 Score = 35.4 bits (80), Expect(3) = 6e-06
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -2

Query: 102 GSDGNGSMRERGCLSRVLKGAQN 34
           GS   GS +ERGCLSRVLKGAQ+
Sbjct: 76  GSRVLGSTKERGCLSRVLKGAQD 98



 Score = 25.4 bits (54), Expect(3) = 6e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 319 RHQEKLVPVPNPRNPMRTSFETPIPFPTPR-PIS 221
           R   +  P+ +  N +R   + PIPFPTPR P+S
Sbjct: 6   RSSSRPKPLESNENELRNPGD-PIPFPTPRSPLS 38


>gb|ONK63044.1| uncharacterized protein A4U43_C07F10830, partial [Asparagus
           officinalis]
          Length = 2052

 Score = 35.8 bits (81), Expect(3) = 6e-06
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 233 KTHFNSIQDPSQHSIPS-QIDLGFYKGARSTPKSIQIITERSRSRV 99
           ++  +SI DPSQ S    QID    KGA  TPKS+QI   R  SRV
Sbjct: 34  RSPLSSIHDPSQISANGLQIDPFSVKGAGLTPKSVQIAAARCGSRV 79



 Score = 35.4 bits (80), Expect(3) = 6e-06
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -2

Query: 102 GSDGNGSMRERGCLSRVLKGAQN 34
           GS   GS +ERGCLSRVLKGAQ+
Sbjct: 76  GSRVLGSTKERGCLSRVLKGAQD 98



 Score = 25.4 bits (54), Expect(3) = 6e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 319 RHQEKLVPVPNPRNPMRTSFETPIPFPTPR-PIS 221
           R   +  P+ +  N +R   + PIPFPTPR P+S
Sbjct: 6   RSSSRPKPLESNENELRNPGD-PIPFPTPRSPLS 38


Top