BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029564
         (731 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD94118.1| putative endosomal protein, partial [Arabidopsis...    54   8e-06

>dbj|BAD94118.1| putative endosomal protein, partial [Arabidopsis thaliana]
          Length = 124

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   VALTYFQLAAEDHEWWWR*V----SHSPFLQAYAPMHHYTQKHTPF*FYSYVSLIRYASC 170
           VALTYFQLAAEDHEWWWR      S   F+ AY  +++Y  +     F        Y +C
Sbjct: 35  VALTYFQLAAEDHEWWWRSFLCGGSTGLFIYAYC-LYYYYARSDMSGFMQTSFFFGYMAC 93

Query: 171 ICY 179
           ICY
Sbjct: 94  ICY 96