BLASTX nr result

ID: Ophiopogon24_contig00029483 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029483
         (537 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261574.1| uncharacterized protein LOC109837663 [Aspara...   116   8e-27
gb|ONK72554.1| uncharacterized protein A4U43_C04F20630 [Asparagu...   116   8e-27

>ref|XP_020261574.1| uncharacterized protein LOC109837663 [Asparagus officinalis]
          Length = 668

 Score =  116 bits (290), Expect = 8e-27
 Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
 Frame = -2

Query: 536 SSGIEIVQSKHCLPKAEKPTIEKP---VPACEEQSHVVPLGAFPMAXXXXXXXXXXSPVL 366
           SSGIE+++S     K E P  E P    P+ E+Q+H  PL   PM           + VL
Sbjct: 163 SSGIEVIRSHKFSVKVENPMKEMPPLLTPSSEKQNHAAPLADSPMINSHGNVDRDKNQVL 222

Query: 365 ENLSVNSDEETVHKAIKVESLNPRNESKVPTPQVISEVVFSENNMDVLNRQEQKGPNDMT 186
           ++ ++++  E V K +KVES      SK+ +     E V +ENNMD L R++ +  N   
Sbjct: 223 QDRNLDAHVEIVKKPMKVESPTSCGGSKMLSEVTTKEEV-NENNMDELKRRDHEIANKEK 281

Query: 185 DESVAEILKVPDDCSGGSVQSTPPDTGFANKVDGTELGSRRTIS--QPALNNTIQNNLGL 12
           D S AE LKV ++C    VQSTPPD     K+DGTE GS RTIS  + AL NT +N  GL
Sbjct: 282 DGSDAEKLKVSENCREDIVQSTPPDAELTRKLDGTEFGSGRTISPLKSALKNTSRNYTGL 341

Query: 11  VSC 3
           VSC
Sbjct: 342 VSC 344


>gb|ONK72554.1| uncharacterized protein A4U43_C04F20630 [Asparagus officinalis]
          Length = 688

 Score =  116 bits (290), Expect = 8e-27
 Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
 Frame = -2

Query: 536 SSGIEIVQSKHCLPKAEKPTIEKP---VPACEEQSHVVPLGAFPMAXXXXXXXXXXSPVL 366
           SSGIE+++S     K E P  E P    P+ E+Q+H  PL   PM           + VL
Sbjct: 183 SSGIEVIRSHKFSVKVENPMKEMPPLLTPSSEKQNHAAPLADSPMINSHGNVDRDKNQVL 242

Query: 365 ENLSVNSDEETVHKAIKVESLNPRNESKVPTPQVISEVVFSENNMDVLNRQEQKGPNDMT 186
           ++ ++++  E V K +KVES      SK+ +     E V +ENNMD L R++ +  N   
Sbjct: 243 QDRNLDAHVEIVKKPMKVESPTSCGGSKMLSEVTTKEEV-NENNMDELKRRDHEIANKEK 301

Query: 185 DESVAEILKVPDDCSGGSVQSTPPDTGFANKVDGTELGSRRTIS--QPALNNTIQNNLGL 12
           D S AE LKV ++C    VQSTPPD     K+DGTE GS RTIS  + AL NT +N  GL
Sbjct: 302 DGSDAEKLKVSENCREDIVQSTPPDAELTRKLDGTEFGSGRTISPLKSALKNTSRNYTGL 361

Query: 11  VSC 3
           VSC
Sbjct: 362 VSC 364


Top