BLASTX nr result
ID: Ophiopogon24_contig00029472
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00029472
(563 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_024232146.1| vegetative cell wall protein gp1-like, parti... 44 6e-08
ref|XP_002957165.1| hypothetical protein VOLCADRAFT_98215 [Volvo... 43 1e-06
ref|XP_014814857.1| PREDICTED: nascent polypeptide-associated co... 44 3e-06
ref|XP_014814856.1| PREDICTED: nascent polypeptide-associated co... 44 3e-06
ref|XP_014814858.1| PREDICTED: nascent polypeptide-associated co... 44 3e-06
ref|XP_014814860.1| PREDICTED: nascent polypeptide-associated co... 44 3e-06
ref|XP_010976676.1| PREDICTED: putative uncharacterized protein ... 43 3e-06
gb|PSC74945.1| hypothetical protein C2E20_2055 isoform A [Micrac... 45 8e-06
>ref|XP_024232146.1| vegetative cell wall protein gp1-like, partial [Oncorhynchus
tshawytscha]
Length = 388
Score = 43.5 bits (101), Expect(2) = 6e-08
Identities = 35/108 (32%), Positives = 38/108 (35%), Gaps = 14/108 (12%)
Frame = +2
Query: 23 PQPATAVAVPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLHSAPAA 202
P P +A+ PP S P LP P P S P + SP L P S P
Sbjct: 54 PSPPSALIPPPPSPPPSLPSLPPLPPPPSPPPPPPPSPPPSPSPSLILPPPPPPPSHPPL 113
Query: 203 TC--------------RLWLPSPVPAPPELAAPIRPHLHHPRSGHPPS 304
L PSP P PP P PH H P S PPS
Sbjct: 114 PPPLPPLPPPPSPLPPSLPPPSPSPPPPPSLPPPIPHPHRPPSPSPPS 161
Score = 40.8 bits (94), Expect(2) = 6e-08
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 282 PDPAILRRAIVLPQPQSLVLRLPSIRAAPSLGRRPLPCCSPLRIHPHPPASDPSLRFRPP 461
P P ++ LP P S + LP + +PS P P C P R P PP S P PP
Sbjct: 199 PSPPPPLPSLPLPPPPSSLPSLP-LPPSPSPPPPPSPPCPPSR-PPSPPPSHPPPSTPPP 256
Query: 462 LSAATPGDPPPLL 500
S +P PPP L
Sbjct: 257 PSTPSPSLPPPSL 269
>ref|XP_002957165.1| hypothetical protein VOLCADRAFT_98215 [Volvox carteri f. nagariensis]
gb|EFJ41819.1| hypothetical protein VOLCADRAFT_98215 [Volvox carteri f. nagariensis]
Length = 2469
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 276 TTPDPAILRRAIVLPQPQS--LVLRLPSIRAAPSLGRRPLPCCSPLRIHPHPPASDPS-- 443
T P P + P P S L L+ PS + +PSL P P P P PP+ +PS
Sbjct: 1712 TPPQPPSPQPPSPEPSPPSSGLPLQPPSPQPSPSLPSPPSPATPPQPPSPQPPSPEPSPP 1771
Query: 444 ---LRFRPPLSAATPGDPPPLLRAALVEFPS 527
L +PP TP PPP A + PS
Sbjct: 1772 SPGLPLQPPRPQPTPALPPPPSPATPPQPPS 1802
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 23 PQPATAVAVPPWSSPLQLPRAPSTPVASSAKPSS---VRGSSTTLSPVLG*PSSADLHSA 193
PQP+ A+ PP + P +P P + PS ++ S SP L P S
Sbjct: 1614 PQPSPALPSPPSPATPPQPPSPQPPSPEPSPPSPGLPLQPPSPQPSPSLPSPPSPATPPQ 1673
Query: 194 PAATCRLWLPSPVPAPPELAAPIRPHLHHPRSGHP 298
P + PSP P+PP P++P P P
Sbjct: 1674 PPSPQP---PSPEPSPPSPGLPLQPPSPQPTPALP 1705
Score = 41.2 bits (95), Expect(2) = 6e-06
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +2
Query: 23 PQPATAVAVPPWSSPLQLPRAPSTPVASSAKPSS---VRGSSTTLSPVLG*PSSADLHSA 193
PQP A+ PP + P +P P + PSS ++ S SP L P S
Sbjct: 1698 PQPTPALPSPPSPATPPQPPSPQPPSPEPSPPSSGLPLQPPSPQPSPSLPSPPSPATPPQ 1757
Query: 194 PAATCRLWLPSPVPAPPELAAPIRPHLHHPRSGHPP 301
P + PSP P+PP P++P P PP
Sbjct: 1758 PPSPQP---PSPEPSPPSPGLPLQPPRPQPTPALPP 1790
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +3
Query: 276 TTPDPAILRRAIVLPQPQS--LVLRLPSIRAAPSLGRRPLPCCSPLRIHPHPPASDPS-- 443
T P P + P P S L L+ PS + +PSL P P P P PP+ PS
Sbjct: 1796 TPPQPPSPQPPSPEPSPPSPGLPLQPPSPQPSPSLPSPPSPATPPQPPSPQPPSPAPSPP 1855
Query: 444 ---LRFRPPLSAATPGDPPP 494
L +PP +P P P
Sbjct: 1856 SSGLPLQPPSPQPSPSLPSP 1875
>ref|XP_014814857.1| PREDICTED: nascent polypeptide-associated complex subunit alpha
isoform X2 [Calidris pugnax]
Length = 1014
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 23 PQPATAVA-VPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLH---- 187
P PA VA V P S+P P AP+ P A+ P S + + +P PS+A +
Sbjct: 395 PAPAAKVAPVSPVSAPAPAPPAPAAPSAAKVAPVSPVSAPSPSAPAPAAPSAAKVAPVSP 454
Query: 188 -SAPAA--TCRLWLPSPVPAPPELAAPIRP 268
SAPAA + SPVPAP +AP P
Sbjct: 455 VSAPAAPPAAKAAPVSPVPAPSSPSAPAPP 484
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Frame = +3
Query: 282 PDPAILRRAIVLP-QPQSLVLRLPSIRAAPSLGRR---------PLPCCSPLRIHPHPPA 431
P PA A V P P S P AAPS + P P +P P PA
Sbjct: 484 PAPAAPSAAKVAPVSPGSAPAPAPPAPAAPSAAKEAPLSPVAAPPTPA-TPAMASPPAPA 542
Query: 432 SDPSLRFRPPLSAATPGDPPPLLRAALVEFPSTGRLPAG 548
+ P+ + P A P P P + AA P+ + P G
Sbjct: 543 APPAAKAGPKSPVAAPSAPAPPVPAAPAAPPAAKKPPKG 581
>ref|XP_014814856.1| PREDICTED: nascent polypeptide-associated complex subunit alpha
isoform X1 [Calidris pugnax]
Length = 1014
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 23 PQPATAVA-VPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLH---- 187
P PA VA V P S+P P AP+ P A+ P S + + +P PS+A +
Sbjct: 395 PAPAAKVAPVSPVSAPAPAPPAPAAPSAAKVAPVSPVSAPSPSAPAPAAPSAAKVAPVSP 454
Query: 188 -SAPAA--TCRLWLPSPVPAPPELAAPIRP 268
SAPAA + SPVPAP +AP P
Sbjct: 455 VSAPAAPPAAKAAPVSPVPAPSSPSAPAPP 484
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Frame = +3
Query: 282 PDPAILRRAIVLP-QPQSLVLRLPSIRAAPSLGRR---------PLPCCSPLRIHPHPPA 431
P PA A V P P S P AAPS + P P +P P PA
Sbjct: 484 PAPAAPSAAKVAPVSPGSAPAPAPPAPAAPSAAKEAPLSPVAAPPTPA-TPAMASPPAPA 542
Query: 432 SDPSLRFRPPLSAATPGDPPPLLRAALVEFPSTGRLPAG 548
+ P+ + P A P P P + AA P+ + P G
Sbjct: 543 APPAAKAGPKSPVAAPSAPAPPVPAAPAAPPAAKKPPKG 581
>ref|XP_014814858.1| PREDICTED: nascent polypeptide-associated complex subunit alpha
isoform X3 [Calidris pugnax]
ref|XP_014814859.1| PREDICTED: nascent polypeptide-associated complex subunit alpha
isoform X4 [Calidris pugnax]
Length = 997
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 23 PQPATAVA-VPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLH---- 187
P PA VA V P S+P P AP+ P A+ P S + + +P PS+A +
Sbjct: 378 PAPAAKVAPVSPVSAPAPAPPAPAAPSAAKVAPVSPVSAPSPSAPAPAAPSAAKVAPVSP 437
Query: 188 -SAPAA--TCRLWLPSPVPAPPELAAPIRP 268
SAPAA + SPVPAP +AP P
Sbjct: 438 VSAPAAPPAAKAAPVSPVPAPSSPSAPAPP 467
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Frame = +3
Query: 282 PDPAILRRAIVLP-QPQSLVLRLPSIRAAPSLGRR---------PLPCCSPLRIHPHPPA 431
P PA A V P P S P AAPS + P P +P P PA
Sbjct: 467 PAPAAPSAAKVAPVSPGSAPAPAPPAPAAPSAAKEAPLSPVAAPPTPA-TPAMASPPAPA 525
Query: 432 SDPSLRFRPPLSAATPGDPPPLLRAALVEFPSTGRLPAG 548
+ P+ + P A P P P + AA P+ + P G
Sbjct: 526 APPAAKAGPKSPVAAPSAPAPPVPAAPAAPPAAKKPPKG 564
>ref|XP_014814860.1| PREDICTED: nascent polypeptide-associated complex subunit alpha
isoform X5 [Calidris pugnax]
Length = 989
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 23 PQPATAVA-VPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLH---- 187
P PA VA V P S+P P AP+ P A+ P S + + +P PS+A +
Sbjct: 370 PAPAAKVAPVSPVSAPAPAPPAPAAPSAAKVAPVSPVSAPSPSAPAPAAPSAAKVAPVSP 429
Query: 188 -SAPAA--TCRLWLPSPVPAPPELAAPIRP 268
SAPAA + SPVPAP +AP P
Sbjct: 430 VSAPAAPPAAKAAPVSPVPAPSSPSAPAPP 459
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 10/99 (10%)
Frame = +3
Query: 282 PDPAILRRAIVLP-QPQSLVLRLPSIRAAPSLGRR---------PLPCCSPLRIHPHPPA 431
P PA A V P P S P AAPS + P P +P P PA
Sbjct: 459 PAPAAPSAAKVAPVSPGSAPAPAPPAPAAPSAAKEAPLSPVAAPPTPA-TPAMASPPAPA 517
Query: 432 SDPSLRFRPPLSAATPGDPPPLLRAALVEFPSTGRLPAG 548
+ P+ + P A P P P + AA P+ + P G
Sbjct: 518 APPAAKAGPKSPVAAPSAPAPPVPAAPAAPPAAKKPPKG 556
>ref|XP_010976676.1| PREDICTED: putative uncharacterized protein FLJ22184 [Camelus
dromedarius]
Length = 868
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +2
Query: 17 SLPQPATAVAVPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSS-ADLHSA 193
SL P + +A P +P L P P + S P S++ + TL P P + + LH++
Sbjct: 453 SLRNPPSPLATRPLQAPSPLT-TPPPPTSPSVSPPSLQATPCTLPPTKDPPLALSPLHAS 511
Query: 194 PAATCRLWLPSPVPAPPELAAP---IRPHLHHP-RSGHPPS 304
P+ T SP+ AP LA P I P L P R PP+
Sbjct: 512 PSLTTLSLQGSPLGAPSPLATPPLQIPPPLDTPLRLATPPT 552
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 318 PQPQSLVLRLPSIRAAPSLGRRPL-----PCCSPLRIHPHPPASDPSLRFRPPLSAATPG 482
P P S LP+++A PSLG PL P SPL P P + L+ PP A+ P
Sbjct: 583 PLPPSPSQILPTLQAPPSLGLPPLQAPPSPPSSPLLQDPLSPLAASPLQ-APPSLASPPL 641
Query: 483 DPPPLLRAALVEFPSTGRLP 542
PP L + ++ P + P
Sbjct: 642 QAPPTLDSLPLQDPPSLATP 661
>gb|PSC74945.1| hypothetical protein C2E20_2055 isoform A [Micractinium conductrix]
Length = 1315
Score = 44.7 bits (104), Expect(2) = 8e-06
Identities = 31/96 (32%), Positives = 38/96 (39%)
Frame = +2
Query: 17 SLPQPATAVAVPPWSSPLQLPRAPSTPVASSAKPSSVRGSSTTLSPVLG*PSSADLHSAP 196
SLP P + P S PL P +P+ S PS + L P P + P
Sbjct: 323 SLPPPLLQLPPPSPSPPLPASPTPPSPLLSPLPPSPLPPPPPLLPPPSPSPPLPTSPTPP 382
Query: 197 AATCRLWLPSPVPAPPELAAPIRPHLHHPRSGHPPS 304
+ PSP+P PP L P P P S PPS
Sbjct: 383 SPLLSPLPPSPLPPPPPLLPPPSPSPPLPTSPTPPS 418
Score = 32.3 bits (72), Expect(2) = 8e-06
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 345 LPSIRAAPSLGRRPLPCCSPLRIHPHPPASDPSLRFRPPLSAATPGDPPP 494
LP+ PS PLP P + P PP PS P S P PPP
Sbjct: 410 LPTSPTPPSPAPSPLP---PSPLPPSPPPPSPSPPLLAPPSPPPPSPPPP 456