BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029447
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               192   4e-54
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...   189   3e-53
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   179   2e-49
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]   178   3e-49
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   174   1e-47
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   173   2e-47
gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposo...   169   3e-47
gb|ABA96257.1| retrotransposon protein, putative, Ty1-copia subc...   169   5e-47
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]   171   5e-47
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   171   1e-46
gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposo...   167   7e-46
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   168   1e-45
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   167   2e-45
emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]        167   3e-45
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa]                        167   3e-45
gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subc...   167   4e-45
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   167   4e-45
dbj|BAB03249.1| polyprotein [Oryza sativa]                            167   4e-45
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     167   4e-45
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   167   4e-45

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  192 bits (488), Expect = 4e-54
 Identities = 88/139 (63%), Positives = 108/139 (77%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYVYLM++KS+A E FK ++ E ENQFGRKIKR RSDRG EY+S EFNS   S GIIHET
Sbjct: 528 TYVYLMKNKSDAFENFKTYLHEVENQFGRKIKRIRSDRGREYESNEFNSFVRSLGIIHET 587

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           T PYSP  NG AERKNRT  EL  A++I S A  ++WGE +LT CYVLNRVP+ K++++P
Sbjct: 588 TPPYSPSSNGVAERKNRTLVELTNAMLIESHAPLNFWGEAILTACYVLNRVPHKKSKLTP 647

Query: 362 FELWKNRKPNVSYFKIWGC 418
           FELWK  KP++ Y ++WGC
Sbjct: 648 FELWKGYKPSLGYLRVWGC 666


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score =  189 bits (480), Expect = 3e-53
 Identities = 87/139 (62%), Positives = 107/139 (76%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYVYLM++KS+A E FK ++ E ENQFGRKIKR RSDRG EY+S EFNS   S GIIHET
Sbjct: 329 TYVYLMKNKSDAFENFKTYLHEVENQFGRKIKRIRSDRGREYESNEFNSFVRSLGIIHET 388

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           T PYSP  NG AERKNRT  EL  A++I S A  ++WGE +LT CYVLNRVP+ K++++ 
Sbjct: 389 TPPYSPSSNGAAERKNRTLVELTNAMLIESHAPLNFWGETILTACYVLNRVPHKKSKLTH 448

Query: 362 FELWKNRKPNVSYFKIWGC 418
           FELWK  KP++ Y ++WGC
Sbjct: 449 FELWKGYKPSLGYLRVWGC 467


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  179 bits (454), Expect = 2e-49
 Identities = 80/139 (57%), Positives = 103/139 (74%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYV+L+++KSE    FK++ TE ENQ G+ IK  RSDRG EY S+EFNS  E  GIIHE 
Sbjct: 323 TYVFLLKNKSETFNAFKVYKTEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHEC 382

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           TAPY+P+ NG AERKNRT+ E+V A+++ +    + WGE L T C++LNR+P  K  ISP
Sbjct: 383 TAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALFTACHILNRIPMKKNEISP 442

Query: 362 FELWKNRKPNVSYFKIWGC 418
           +ELWK RKPN+ YFK+WGC
Sbjct: 443 YELWKGRKPNIGYFKVWGC 461


>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score =  178 bits (452), Expect = 3e-49
 Identities = 80/139 (57%), Positives = 102/139 (73%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYV+L+++KSE    FK++  E ENQ G+ IK  RSDRG EY S+EFNS  E  GIIHE 
Sbjct: 420 TYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHEC 479

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           TAPY+P+ NG AERKNRT+ E+V A+++ +    + WGE LL  CY+LNR+P  K  ISP
Sbjct: 480 TAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLIACYILNRIPMKKNEISP 539

Query: 362 FELWKNRKPNVSYFKIWGC 418
           +ELWK RKPN+ YFK+WGC
Sbjct: 540 YELWKGRKPNIGYFKVWGC 558


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  174 bits (441), Expect = 1e-47
 Identities = 78/139 (56%), Positives = 101/139 (72%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYV+L+++KSE    FK++  E ENQ  + IK  RSDRG EY S+EFNS  E  GIIHE 
Sbjct: 530 TYVFLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDRGXEYFSSEFNSFCEEYGIIHEC 589

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           TAPY+P+ NG AERKNRT+ E+V  +++ +    + WGE LLT C++LNR+P  K  ISP
Sbjct: 590 TAPYTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWGEALLTACHILNRIPMKKKEISP 649

Query: 362 FELWKNRKPNVSYFKIWGC 418
           +ELWK RKPN+ YFK+WGC
Sbjct: 650 YELWKGRKPNIGYFKVWGC 668


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1075

 Score =  173 bits (439), Expect = 2e-47
 Identities = 81/138 (58%), Positives = 98/138 (71%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL+R K EA E FKIF  E ENQ   KIK  RSDRG EY S EF+  ++  GIIHETT
Sbjct: 427 YVYLLRTKDEAFEHFKIFKAEAENQLDLKIKILRSDRGGEYLSIEFSKFHQEHGIIHETT 486

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PYSP+ NG AERKNRT   LV A++ +SG   + WGE L T C+VLNRVP   T ++P+
Sbjct: 487 PPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVLNRVPAKGTEVTPY 546

Query: 365 ELWKNRKPNVSYFKIWGC 418
           ELWK RKPN+++ K+WGC
Sbjct: 547 ELWKGRKPNLNFLKVWGC 564


>gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 565

 Score =  169 bits (429), Expect = 3e-47
 Identities = 75/138 (54%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL+ HKSE  E FK++  E ENQ  + IK  RSDRG EY S E    +E+ GIIHE T
Sbjct: 115 YVYLIIHKSELFEKFKVYKAEVENQLEKSIKILRSDRGGEYSSNEMGEFFETHGIIHEVT 174

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PY+P+ NG AERKNRT  +++ A++ISSG   + WGE L T C++LNR+P   +  +P+
Sbjct: 175 PPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPY 234

Query: 365 ELWKNRKPNVSYFKIWGC 418
           ELWKNRKPN+ Y K+WGC
Sbjct: 235 ELWKNRKPNLKYLKVWGC 252


>gb|ABA96257.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 580

 Score =  169 bits (428), Expect = 5e-47
 Identities = 77/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 314 YVYLLKRKDEALHYFKIYKAEVENQLERKIKRLRSDRGREYFSNEFASFCEEFGIIHERT 373

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PY P+ NG AERKNRT AE+V A++ ++G    WWGE +LT CYVLN++P    +++PF
Sbjct: 374 PPYLPQSNGVAERKNRTLAEIVNAMLDTTGLCKEWWGEAVLTACYVLNKIPMKHKKVTPF 433

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+SY + WGC
Sbjct: 434 EEWERKKLNLSYLRTWGC 451


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score =  171 bits (434), Expect = 5e-47
 Identities = 77/139 (55%), Positives = 101/139 (72%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           TYV+L+++KSE    FK++  + ENQ G+ IK  RSDRG EY S+EFNS  E  GIIHE 
Sbjct: 508 TYVFLLKNKSETFNAFKVYNAKVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHEC 567

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           TAPY+P+ NG AERKNRT+ E+V A+++ +    + WGE LL  C++LNR+P  K  ISP
Sbjct: 568 TAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLIACHILNRIPMKKNEISP 627

Query: 362 FELWKNRKPNVSYFKIWGC 418
           +ELWK RKPN+ YFK+W C
Sbjct: 628 YELWKGRKPNIGYFKVWRC 646


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score =  171 bits (432), Expect = 1e-46
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL+ HKSE  E FK++  E ENQ  R IK  RSDRG EY S E    +E+ GIIHE T
Sbjct: 445 YVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGGEYSSNEMGEFFETHGIIHEVT 504

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PY+P+ NG AERKNRT  +++ A++ISSG   + WGE L T C++LNR+P   +  +P+
Sbjct: 505 PPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPY 564

Query: 365 ELWKNRKPNVSYFKIWGC 418
           ELWKNRKPN+ Y K+WGC
Sbjct: 565 ELWKNRKPNLKYLKVWGC 582


>gb|KYP31709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score =  167 bits (424), Expect = 7e-46
 Identities = 75/138 (54%), Positives = 96/138 (69%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL+ HKSE  E FK++  E ENQ  R IK  RSDRG EY S E    +E+ GIIHE T
Sbjct: 443 YVYLIIHKSELFEKFKVYKAEVENQLERSIKILRSDRGGEYSSNEMGEFFETHGIIHEVT 502

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PY+P+ NG AERKNRT  +++ A++ISSG   + WGE L T C++LNR+P   +  +P+
Sbjct: 503 PPYAPQSNGIAERKNRTLLDMINAMLISSGLPDNLWGEALFTACHILNRIPYKNSDKTPY 562

Query: 365 ELWKNRKPNVSYFKIWGC 418
           ELWKNRKPN+ Y K+W C
Sbjct: 563 ELWKNRKPNLKYLKVWWC 580


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  168 bits (426), Expect = 1e-45
 Identities = 80/138 (57%), Positives = 99/138 (71%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           Y+YL+R K EA+E FKI+ TE ENQ  +KIKR RSDRG EY S  F+   +  GIIHETT
Sbjct: 541 YIYLLRTKDEALEHFKIYKTEVENQLDKKIKRLRSDRGGEYLSNLFDEYCKECGIIHETT 600

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
           APYSP+ NG AERKNRT  +L  A++ SSG    WWGE +LTVCYVLNRVP      +P+
Sbjct: 601 APYSPQSNGVAERKNRTVCDLANALLQSSGMPDIWWGEAVLTVCYVLNRVPPRNREATPY 660

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E +K RKP++S+ + WGC
Sbjct: 661 EGFKGRKPDLSHLRTWGC 678


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  167 bits (424), Expect = 2e-45
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 489 YVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIHERT 548

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLNR+P     ++PF
Sbjct: 549 PPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAILTACHVLNRIPTKHKEVTPF 608

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+S+ + WGC
Sbjct: 609 EEWERKKLNLSHLRTWGC 626


>emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  167 bits (423), Expect = 3e-45
 Identities = 77/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 542 YVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMT 601

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLN++P     I+PF
Sbjct: 602 PPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEITPF 661

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+SY + WGC
Sbjct: 662 EEWERKKLNLSYLRTWGC 679


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa]
          Length = 1413

 Score =  167 bits (423), Expect = 3e-45
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5    YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
            YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 634  YVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMT 693

Query: 185  APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
             PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLN++P     ++PF
Sbjct: 694  PPYSPQSNGMAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEVTPF 753

Query: 365  ELWKNRKPNVSYFKIWGC 418
            E W+ +K N+SY + WGC
Sbjct: 754  EEWERKKLNLSYLRTWGC 771


>gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 991

 Score =  167 bits (422), Expect = 4e-45
 Identities = 76/138 (55%), Positives = 98/138 (71%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIK+ RSDRG EY S EF S  E  GIIHE T
Sbjct: 305 YVYLLKTKDEALHYFKIYKAEVENQLERKIKQLRSDRGGEYFSNEFISFCEEYGIIHERT 364

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
           APYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLNR+P     ++PF
Sbjct: 365 APYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAILTACHVLNRIPTKHKEVTPF 424

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+S+ + WGC
Sbjct: 425 EEWERKKLNLSHLRTWGC 442


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  167 bits (422), Expect = 4e-45
 Identities = 73/139 (52%), Positives = 101/139 (72%)
 Frame = +2

Query: 2   TYVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHET 181
           T +YL++ K+EA+ MF  F  E+ENQ G++IKR RSDRG EY         ES+GIIHE 
Sbjct: 557 TKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEF 616

Query: 182 TAPYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISP 361
           TAPYSP+ NG AERKNRT  E++ A+++SSG + + WGE +L+ C++LNR+P+ +   +P
Sbjct: 617 TAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWGEAVLSACFILNRIPHKRLDKTP 676

Query: 362 FELWKNRKPNVSYFKIWGC 418
           +ELWK   PN+SY K+WGC
Sbjct: 677 YELWKGHAPNLSYLKVWGC 695


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  167 bits (422), Expect = 4e-45
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 489 YVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMT 548

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLN++P     ++PF
Sbjct: 549 PPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEVTPF 608

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+SY + WGC
Sbjct: 609 EEWERKKLNLSYLRTWGC 626


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  167 bits (422), Expect = 4e-45
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5   YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
           YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 489 YVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMT 548

Query: 185 APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
            PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLN++P     ++PF
Sbjct: 549 PPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEVTPF 608

Query: 365 ELWKNRKPNVSYFKIWGC 418
           E W+ +K N+SY + WGC
Sbjct: 609 EEWERKKLNLSYLRTWGC 626


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  167 bits (422), Expect = 4e-45
 Identities = 76/138 (55%), Positives = 97/138 (70%)
 Frame = +2

Query: 5    YVYLMRHKSEAIEMFKIFVTETENQFGRKIKRFRSDRGTEYDSAEFNSLYESSGIIHETT 184
            YVYL++ K EA+  FKI+  E ENQ  RKIKR RSDRG EY S EF S  E  GIIHE T
Sbjct: 634  YVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMT 693

Query: 185  APYSPEMNGKAERKNRTYAELVVAIMISSGAAPHWWGEILLTVCYVLNRVPNSKTRISPF 364
             PYSP+ NG AERKNRT  E+V A++ ++G +  WWGE +LT C+VLN++P     ++PF
Sbjct: 694  PPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEVTPF 753

Query: 365  ELWKNRKPNVSYFKIWGC 418
            E W+ +K N+SY + WGC
Sbjct: 754  EEWERKKLNLSYLRTWGC 771