BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00029279
         (780 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondria...   139   2e-33
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    65   4e-08
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...    60   2e-06
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...    58   9e-06

>ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Asparagus
           officinalis]
 gb|ONK55019.1| uncharacterized protein A4U43_UnF8500 [Asparagus officinalis]
          Length = 1023

 Score =  139 bits (349), Expect = 2e-33
 Identities = 88/197 (44%), Positives = 109/197 (55%), Gaps = 12/197 (6%)
 Frame = -1

Query: 555 LMCSTTTLISSHLGPFPIQSHXXXXXXXXXXXXXXP--QMWRTVGRAAPRSSKNLAASIP 382
           ++CS  TLI S L P PIQ H                 QM+RT+ R  PRS+K L++SIP
Sbjct: 1   MLCSAKTLIPSQLNPLPIQPHPNPFNSISSPNPSQISAQMYRTLARTIPRSTKTLSSSIP 60

Query: 381 QLSNFLGFSCESLSVHKNPIFGLKAPFRPTSTHLGTRQNLEFC-------PNSGSISRGF 223
           QLSNF+GF     S HKNPIF          T +G  Q +EF        P +  + R F
Sbjct: 61  QLSNFMGFPQNPSSSHKNPIF----------TLIGNPQKVEFSTFDGILKPLAREVPRFF 110

Query: 222 TGIR---SLXXXXXXXXXXXSTDADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRNL 52
           TG R   S+           STDADEAAE+QE+LEEL  VQV + +  A+ N NR +RN 
Sbjct: 111 TGTRSFASVAEAEVEVEAASSTDADEAAEIQEILEELSKVQVSTSNNAASENTNR-KRNF 169

Query: 51  PRTQHRPLGMGAGKYAM 1
            +TQHRPLGMG GKYA+
Sbjct: 170 EKTQHRPLGMGTGKYAI 186


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
 Frame = -1

Query: 447 QMWRTVGRAAPRSSKNLA--------ASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPT 292
           +MWR +   A  SS+ L          +IP +S+F+G + +S+S  ++ I  L APF   
Sbjct: 37  EMWRNLATKASSSSRYLGFAGRPSSVPAIPSISSFIGSAQDSISCERSRILDLTAPFSHR 96

Query: 291 STHLGTRQNLEFCP----NSGSISRGFTGIRSLXXXXXXXXXXXSTDADEAA----EVQE 136
           S+++G   N +  P    ++ SI R    +              STD DE A    E+Q 
Sbjct: 97  SSNMGFCHNGDLLPFIRRSNSSIWRISGHLGDSRFFASVAEAVASTDVDEDASSIEEIQG 156

Query: 135 MLEELKNVQVDSRSG-YANGNNNRVRRNLPRTQHRPL-GMGAGKYAM 1
           MLEE+   ++D+R G    GN   VR  +P  + R + GMG+GKYA+
Sbjct: 157 MLEEMS--KIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKYAI 201


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Phoenix dactylifera]
          Length = 1038

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
 Frame = -1

Query: 447 QMWRTVGRAAPRSSKNL--------AASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPT 292
           +MWR + R A  SS+ L          +IP +S+FLG S +S+   ++ I  L  PF   
Sbjct: 37  EMWRNLARKASSSSRYLDFAGRPSSVPAIPSISSFLGSSQDSICCERSRILDLGTPFSHR 96

Query: 291 STHLGTRQNLEF-----CPNSGSISRGFTGIRSLXXXXXXXXXXXSTDADE----AAEVQ 139
           S++ G   N +      CPN  SI R    +              STD DE      E+Q
Sbjct: 97  SSNTGVGHNGDSSPFIRCPNF-SIGRISGRLGDSRFFASVAEAVSSTDVDEDTSSIEEIQ 155

Query: 138 EMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPL-GMGAGKYAM 1
            MLEE+  + V   S    GN   VR      Q R + GMG+GKYA+
Sbjct: 156 GMLEEMSKIDVREGS-KIGGNLEEVRPKQQLGQPRMVCGMGSGKYAI 201


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
           dactylifera]
          Length = 1036

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
 Frame = -1

Query: 444 MWRTVGRAAPRSSKNLA-------ASIPQLSNFLGFSCESLSVHKNPIFGLKAPFRPTST 286
           MWR + + A  S KNL        +++  +S+FLGFS +S    KN I+ L+ P      
Sbjct: 37  MWRIIAQTASNSLKNLRFFAGGSLSALRPISSFLGFSQDSFLCEKNRIWDLRPPLSSRFC 96

Query: 285 HLGTRQNLEFCPNSG----SISRGFTGIRSLXXXXXXXXXXXSTDADEAA----EVQEML 130
            +G+ +N E  P+ G    SI +    + +            STD DE A    E+Q +L
Sbjct: 97  DIGSHRNGELWPSVGYSNCSIGKLSGFLANSKGYANVAEAVVSTDLDEEASSIEEIQSLL 156

Query: 129 EELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYA 4
           EE+  V+V      ++ +    ++       +  GMGA KYA
Sbjct: 157 EEMSRVEVAEDWKVSDRSQEFPQKAQLEEPKKVSGMGAKKYA 198