BLASTX nr result
ID: Ophiopogon24_contig00029239
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00029239
(422 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020095877.1| putative pentatricopeptide repeat-containing... 73 4e-12
ref|XP_008790235.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-11
gb|OAY72532.1| putative pentatricopeptide repeat-containing prot... 70 2e-11
ref|XP_020257798.1| putative pentatricopeptide repeat-containing... 65 2e-09
ref|XP_010936130.1| PREDICTED: putative pentatricopeptide repeat... 65 2e-09
gb|PKA58311.1| Putative pentatricopeptide repeat-containing prot... 64 3e-09
gb|ONK75973.1| uncharacterized protein A4U43_C03F22500 [Asparagu... 64 3e-09
gb|PAN20579.1| hypothetical protein PAHAL_C03650 [Panicum hallii] 63 8e-09
gb|KQL16145.1| hypothetical protein SETIT_024660mg, partial [Set... 63 1e-08
ref|XP_012699838.1| putative pentatricopeptide repeat-containing... 63 1e-08
ref|XP_020185681.1| putative pentatricopeptide repeat-containing... 62 2e-08
gb|ONM59770.1| Putative pentatricopeptide repeat-containing prot... 58 3e-08
dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group] 60 4e-08
gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group] 60 1e-07
gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indi... 60 1e-07
ref|XP_020700690.1| putative pentatricopeptide repeat-containing... 59 3e-07
gb|ONM59774.1| Putative pentatricopeptide repeat-containing prot... 58 4e-07
gb|ONM59772.1| Putative pentatricopeptide repeat-containing prot... 58 5e-07
gb|ONM59775.1| Putative pentatricopeptide repeat-containing prot... 58 5e-07
gb|OEL36077.1| putative pentatricopeptide repeat-containing prot... 58 6e-07
>ref|XP_020095877.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
ref|XP_020095887.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
ref|XP_020095894.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
ref|XP_020095902.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
ref|XP_020095911.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
ref|XP_020095920.1| putative pentatricopeptide repeat-containing protein At1g19290
[Ananas comosus]
Length = 949
Score = 72.8 bits (177), Expect = 4e-12
Identities = 34/57 (59%), Positives = 40/57 (70%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGSVENGIGKEVEH 173
PNYVTY TL+QGYIRCGNL+ VSKL E MHIRGLFP + + E K+V+H
Sbjct: 881 PNYVTYWTLIQGYIRCGNLKQVSKLYEEMHIRGLFPAFPFKGNIYQAEPAAKKQVQH 937
>ref|XP_008790235.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290 [Phoenix dactylifera]
Length = 952
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGSVENGIGKEVEHTIG 182
PNYVTY TLVQGYIRC ++ +SKL E MHIRGLFP V + +G E K ++H
Sbjct: 884 PNYVTYSTLVQGYIRCMDMHQISKLYEEMHIRGLFPAVAFKGNMGPAEPMAVKGIKHGTI 943
Query: 183 KMTAYVDCY 209
++ ++ Y
Sbjct: 944 NLSEHIHAY 952
>gb|OAY72532.1| putative pentatricopeptide repeat-containing protein, partial
[Ananas comosus]
Length = 366
Score = 70.1 bits (170), Expect = 2e-11
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGSV 143
PNYVTY TL+QGYIRCGNL+ VSKL E MHIRGLFP + P SV
Sbjct: 299 PNYVTYWTLIQGYIRCGNLKQVSKLYEEMHIRGLFPAFPFKGPSPSV 345
>ref|XP_020257798.1| putative pentatricopeptide repeat-containing protein At1g19290,
partial [Asparagus officinalis]
Length = 912
Score = 65.1 bits (157), Expect = 2e-09
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGL 122
PNYVTY TLV YIRC NLQ VS+L + MHIRGL PEVGL
Sbjct: 873 PNYVTYSTLVHSYIRCRNLQQVSRLYDQMHIRGLLPEVGL 912
>ref|XP_010936130.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290 [Elaeis guineensis]
ref|XP_010936131.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290 [Elaeis guineensis]
Length = 955
Score = 65.1 bits (157), Expect = 2e-09
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGSVENGIGKEVEHTIG 182
PNYVTY TLV YIRC ++ +SKL E MHIRGLFP V + +G E K +H
Sbjct: 887 PNYVTYSTLVWRYIRCMDMHQISKLYEEMHIRGLFPAVAFKGNMGPAEPIAVKGTKHDTV 946
Query: 183 KMTAYVDCY 209
K+ ++ Y
Sbjct: 947 KLFEHIHAY 955
>gb|PKA58311.1| Putative pentatricopeptide repeat-containing protein [Apostasia
shenzhenica]
Length = 943
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGS 140
PN+VTYCTLV G+IRCG+++ VSKL E MHIRGL P R GS
Sbjct: 875 PNFVTYCTLVHGHIRCGDMRQVSKLYEEMHIRGLLPPADYRGTSGS 920
>gb|ONK75973.1| uncharacterized protein A4U43_C03F22500 [Asparagus officinalis]
Length = 1022
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGL 122
PNYVTY TLV YIRC NLQ VS+L + MHIRGL PEVG+
Sbjct: 873 PNYVTYSTLVHSYIRCRNLQQVSRLYDQMHIRGLLPEVGI 912
>gb|PAN20579.1| hypothetical protein PAHAL_C03650 [Panicum hallii]
Length = 597
Score = 63.2 bits (152), Expect = 8e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP-----EVGLREPLGSVENG 152
PNYVTY TL+QGYIRCGN++ +SKL + MHIRGL P +V P+ +NG
Sbjct: 534 PNYVTYWTLIQGYIRCGNMKEISKLYDEMHIRGLLPAYVAGDVKQASPVERNQNG 588
>gb|KQL16145.1| hypothetical protein SETIT_024660mg, partial [Setaria italica]
Length = 728
Score = 62.8 bits (151), Expect = 1e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGYIRCGN++ +SKL + MHIRGL P
Sbjct: 687 PNYVTYWTLIQGYIRCGNMKEISKLYDEMHIRGLLP 722
>ref|XP_012699838.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
ref|XP_012699839.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
ref|XP_012699840.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
ref|XP_012699841.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
ref|XP_022680481.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
ref|XP_022680482.1| putative pentatricopeptide repeat-containing protein At1g19290
[Setaria italica]
Length = 933
Score = 62.8 bits (151), Expect = 1e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGYIRCGN++ +SKL + MHIRGL P
Sbjct: 870 PNYVTYWTLIQGYIRCGNMKEISKLYDEMHIRGLLP 905
>ref|XP_020185681.1| putative pentatricopeptide repeat-containing protein At1g19290
[Aegilops tauschii subsp. tauschii]
Length = 934
Score = 62.4 bits (150), Expect = 2e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVG 119
PNYVTY TL+QGY+RCGN++ +SKL MHIRGL P G
Sbjct: 873 PNYVTYWTLIQGYVRCGNMKEISKLYNEMHIRGLLPANG 911
>gb|ONM59770.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
Length = 108
Score = 58.2 bits (139), Expect = 3e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGY+RCGN+ +SK+ + MHI GL P
Sbjct: 43 PNYVTYWTLIQGYVRCGNMIEISKIYDKMHIHGLLP 78
>dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group]
Length = 213
Score = 60.1 bits (144), Expect = 4e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNY+TYCTL+ GYI+ GN++ +SKL + MHIRGL P
Sbjct: 147 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 182
>gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 60.1 bits (144), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNY+TYCTL+ GYI+ GN++ +SKL + MHIRGL P
Sbjct: 854 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
>gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
dbj|BAS93110.1| Os05g0275100 [Oryza sativa Japonica Group]
Length = 939
Score = 60.1 bits (144), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNY+TYCTL+ GYI+ GN++ +SKL + MHIRGL P
Sbjct: 873 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>ref|XP_020700690.1| putative pentatricopeptide repeat-containing protein At1g19290
[Dendrobium catenatum]
ref|XP_020700691.1| putative pentatricopeptide repeat-containing protein At1g19290
[Dendrobium catenatum]
ref|XP_020700692.1| putative pentatricopeptide repeat-containing protein At1g19290
[Dendrobium catenatum]
ref|XP_020700693.1| putative pentatricopeptide repeat-containing protein At1g19290
[Dendrobium catenatum]
gb|PKU77225.1| Putative pentatricopeptide repeat-containing protein [Dendrobium
catenatum]
Length = 958
Score = 58.9 bits (141), Expect = 3e-07
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFPEVGLREPLGS 140
PN+VTYCTLV GY R G+L VSKL E MH RGLFP + L S
Sbjct: 892 PNFVTYCTLVYGYKRSGDLSQVSKLYEEMHFRGLFPTFNCKGTLDS 937
>gb|ONM59774.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
Length = 484
Score = 58.2 bits (139), Expect = 4e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGY+RCGN+ +SK+ + MHI GL P
Sbjct: 419 PNYVTYWTLIQGYVRCGNMIEISKIYDKMHIHGLLP 454
>gb|ONM59772.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59776.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59777.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59782.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59784.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59786.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59788.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
Length = 765
Score = 58.2 bits (139), Expect = 5e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGY+RCGN+ +SK+ + MHI GL P
Sbjct: 700 PNYVTYWTLIQGYVRCGNMIEISKIYDKMHIHGLLP 735
>gb|ONM59775.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59778.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59780.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59781.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59783.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59789.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
gb|ONM59790.1| Putative pentatricopeptide repeat-containing protein [Zea mays]
Length = 939
Score = 58.2 bits (139), Expect = 5e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGY+RCGN+ +SK+ + MHI GL P
Sbjct: 874 PNYVTYWTLIQGYVRCGNMIEISKIYDKMHIHGLLP 909
>gb|OEL36077.1| putative pentatricopeptide repeat-containing protein [Dichanthelium
oligosanthes]
Length = 927
Score = 57.8 bits (138), Expect = 6e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 3 PNYVTYCTLVQGYIRCGNLQHVSKLNEAMHIRGLFP 110
PNYVTY TL+QGYIR GN++ +SKL MHIRGL P
Sbjct: 866 PNYVTYWTLIQGYIRSGNMKEISKLYAEMHIRGLLP 901