BLASTX nr result

ID: Ophiopogon24_contig00028754 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00028754
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus...   117   3e-28
ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI ...   117   3e-28

>gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus officinalis]
          Length = 1047

 Score =  117 bits (294), Expect = 3e-28
 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
 Frame = -2

Query: 352  QKFPADGGSDSVLPSEKPSDNASPPLSATVSLVKKYARAIFGRSSEK-VGASSERNAE-R 179
            QKF A GGS S L  +K SD +SP L AT+S+VKKYARAIFGRS EK VGA+SERN + R
Sbjct: 782  QKFSAHGGSGSKLLPDKSSDESSPRLLATMSMVKKYARAIFGRSPEKLVGANSERNVKGR 841

Query: 178  MPVKFDFEDTDVRSDMPL-----LDINVTCIPEIEHKSGADMVITRLKEDGANDMSKENP 14
               K         +   L     L+ NV  IPEIEHKSGAD VIT+LKEDGAN MS+ENP
Sbjct: 842  ASTKSGGGSAGKENGSNLFKKLSLERNVEIIPEIEHKSGADKVITQLKEDGANGMSEENP 901

Query: 13   SATV 2
            S  V
Sbjct: 902  STVV 905


>ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI 4-like [Asparagus
            officinalis]
          Length = 1055

 Score =  117 bits (294), Expect = 3e-28
 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
 Frame = -2

Query: 352  QKFPADGGSDSVLPSEKPSDNASPPLSATVSLVKKYARAIFGRSSEK-VGASSERNAE-R 179
            QKF A GGS S L  +K SD +SP L AT+S+VKKYARAIFGRS EK VGA+SERN + R
Sbjct: 790  QKFSAHGGSGSKLLPDKSSDESSPRLLATMSMVKKYARAIFGRSPEKLVGANSERNVKGR 849

Query: 178  MPVKFDFEDTDVRSDMPL-----LDINVTCIPEIEHKSGADMVITRLKEDGANDMSKENP 14
               K         +   L     L+ NV  IPEIEHKSGAD VIT+LKEDGAN MS+ENP
Sbjct: 850  ASTKSGGGSAGKENGSNLFKKLSLERNVEIIPEIEHKSGADKVITQLKEDGANGMSEENP 909

Query: 13   SATV 2
            S  V
Sbjct: 910  STVV 913


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