BLASTX nr result
ID: Ophiopogon24_contig00028622
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00028622
(505 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 143 2e-36
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 142 5e-36
emb|CAH66031.1| H0515C11.7 [Oryza sativa] 134 2e-35
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 140 2e-35
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 140 2e-35
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 140 3e-35
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 138 1e-34
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 137 2e-34
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 137 2e-34
ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329... 137 2e-34
ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342... 137 3e-34
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 137 3e-34
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 133 3e-34
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group] 132 4e-34
gb|ASR75372.1| retrotransposon protein [Oryza nivara] 136 5e-34
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 136 5e-34
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 136 7e-34
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 135 1e-33
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 133 1e-33
gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. sco... 130 2e-33
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 143 bits (361), Expect = 2e-36
Identities = 81/157 (51%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T L ++F+ SS CPQ + E MS V Y S V SLMY +VC
Sbjct: 950 IEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVCS 1009
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
+ LS + +VSR+M+N K HWK V+ IF Y RGT+S CL F R +D L GYVD+
Sbjct: 1010 RLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQFGRSRDG----LVGYVDS 1065
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ T+ S
Sbjct: 1066 DFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALS 1102
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 142 bits (358), Expect = 5e-36
Identities = 80/157 (50%), Positives = 107/157 (68%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T L ++F+ SS CP + E MS V Y+SAV SLMY +VC
Sbjct: 1043 IEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCC 1102
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + +V+R+M+N K HWK V+ IF Y RGT+S CL F+R +D L GYVD+
Sbjct: 1103 RPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTSSACLQFERSRDG----LVGYVDS 1158
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ T+ S
Sbjct: 1159 DFAGDLDRRRSITGYVFTIGGCAVSWKASLQATVALS 1195
>emb|CAH66031.1| H0515C11.7 [Oryza sativa]
Length = 293
Score = 134 bits (337), Expect = 2e-35
Identities = 77/157 (49%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T + +FK S+ QC + E MS V Y+SAV SLMY +VC
Sbjct: 32 IKKVLQRFNMHDAKPVSTSIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCS 91
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+M+N K HWK + IF Y RGT CL F R L GYVD+
Sbjct: 92 RPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRGTTDACLKF----GRTDKGLVGYVDS 147
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ + S
Sbjct: 148 DFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIVAQS 184
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 140 bits (353), Expect = 2e-35
Identities = 80/157 (50%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+ +RFN+ +PV+T L ++F+ SS CPQ E MS V Y+SAV SLMY ++C
Sbjct: 920 IEKVFRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYNIEYMSRVPYSSAVGSLMYAMICS 979
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + +VSR+M+N K HWK V+ IF Y GT+S CL F R +D L GYVD+
Sbjct: 980 RPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGTSSACLQFGRSRDG----LVGYVDS 1035
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ T+ S
Sbjct: 1036 DFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALS 1072
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 140 bits (353), Expect = 2e-35
Identities = 80/157 (50%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K++ RFN+ + V+T L ++F+ SS CPQ + E MS V Y+SAV SLMY +VC
Sbjct: 980 IEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCS 1039
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + +VSR+M+N K HWK V+ IF Y RGT+S CL F R D L GYVD+
Sbjct: 1040 RPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDG----LVGYVDS 1095
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FT+G CA+SWKA LQ T+ S
Sbjct: 1096 DFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALS 1132
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 140 bits (352), Expect = 3e-35
Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T L ++F+ SS CPQ + E MS V Y+SAV SLMY +VC
Sbjct: 1278 IEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCS 1337
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + +VSR+M+N K HWK V+ IF Y RGT+S CL F R +D L GYVD+
Sbjct: 1338 RPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDG----LVGYVDS 1393
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+ RS GY+FTIG CA+SWKA LQ T+ S
Sbjct: 1394 DFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVALS 1430
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 138 bits (347), Expect = 1e-34
Identities = 79/157 (50%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T L ++F+ SS CPQ + E MS V Y+S V SLMY +VC
Sbjct: 877 IEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSVVGSLMYAMVCS 936
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + +VSR+M+N K HWK V+ IF Y GT+S CL F R +D L GYVD+
Sbjct: 937 RPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGTSSACLQFGRSRDG----LVGYVDS 992
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS GY+FTIG CA+SWKA LQ T+ S
Sbjct: 993 DFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVALS 1029
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 137 bits (346), Expect = 2e-34
Identities = 79/157 (50%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ + V+T + +FK S+ QCP + E E MS V Y+SAV SLMY +VC
Sbjct: 1072 IKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCS 1131
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+MSN K HW+ V+ IF Y RGT CL F R L GYVD+
Sbjct: 1132 RPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKF----GRTDKGLIGYVDS 1187
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
DYA D D+RRS TGY+FTIG CA+SW+A LQ + S
Sbjct: 1188 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 137 bits (346), Expect = 2e-34
Identities = 79/157 (50%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ + V+T + +FK S+ QCP + E E MS V Y+SAV SLMY +VC
Sbjct: 1072 IKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCS 1131
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+MSN K HW+ V+ IF Y RGT CL F R L GYVD+
Sbjct: 1132 RPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKF----GRTDKGLIGYVDS 1187
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
DYA D D+RRS TGY+FTIG CA+SW+A LQ + S
Sbjct: 1188 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
>ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329342, partial [Lupinus
angustifolius]
Length = 832
Score = 137 bits (345), Expect = 2e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 53 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 112
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 113 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 171
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 172 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 212
Score = 137 bits (345), Expect = 2e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 324 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 383
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 384 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 442
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 443 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 483
Score = 137 bits (345), Expect = 2e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 595 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 654
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 655 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 713
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 714 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 754
>ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342419, partial [Lupinus
angustifolius]
Length = 1102
Score = 137 bits (345), Expect = 3e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 139 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 198
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 199 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 257
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 258 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 298
Score = 137 bits (345), Expect = 3e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 496 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 555
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 556 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 614
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 615 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 655
Score = 137 bits (345), Expect = 3e-34
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I K+++RF + +PVTT L S+FK S CPQ E EEMS V YASAV SLMY
Sbjct: 853 QKKYIEKVLERFGMQNAKPVTTPLASHFKLSMALCPQTESENEEMSSVPYASAVGSLMYA 912
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
++C ++ + +VSR+M++ K HWK VK I Y +GT I LL+ ++K S V+ G
Sbjct: 913 MICTRPDIAQAVSVVSRYMASPGKVHWKAVKWIMRYLKGTMDIGLLYGKVKGVGSKVI-G 971
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
YVD+DYA D D+RRS TGY+FT+ C +SWKA LQ + S
Sbjct: 972 YVDSDYAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALS 1012
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 137 bits (345), Expect = 3e-34
Identities = 79/157 (50%), Positives = 102/157 (64%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T + +FK S+ QC + E MS V Y+SAV SLMY +VC
Sbjct: 1061 IKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCS 1120
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+M+N K HWK V+ IF Y RGTA CL F R+ L GYVD+
Sbjct: 1121 WPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRIDKG----LVGYVDS 1176
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ + S
Sbjct: 1177 DFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQS 1213
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 133 bits (335), Expect = 3e-34
Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I +++ RFN++ +PV+T L ++FK SS CPQ E E MS V YASAV SLMY
Sbjct: 125 QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 184
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
+VC L+ + +VSR+M N K HW VK IF Y +GT++I L+F R K + V G
Sbjct: 185 MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVA-G 243
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQ 460
+VD+DY D D+RRS +GYIFT+ + AISWKA LQ
Sbjct: 244 FVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQ 278
>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 132 bits (333), Expect = 4e-34
Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T + S+FK S+ QC + E MS V Y+S V SLMY +VC
Sbjct: 128 IKKVLQRFNMHDAKPVSTPIVSHFKLSALQCASTDEDVEYMSRVPYSSDVGSLMYAMVCS 187
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+M+N K HWK V+ IF Y RGTA CL F R L GYVD+
Sbjct: 188 RPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKF----GRTDKGLVGYVDS 243
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS T Y+FTIG CA+SWKA LQ + S
Sbjct: 244 DFAADLDKRRSLTDYVFTIGSCAMSWKATLQPVVAQS 280
>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
Length = 1170
Score = 136 bits (343), Expect = 5e-34
Identities = 79/157 (50%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC* 190
I K+++RFN+ +PV+T + +FK S+ QC + E MS V Y+SAV SLMY +VC
Sbjct: 981 IKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCS 1040
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+M+N K HWK V+ IF Y RGTA CL F R L GYVD+
Sbjct: 1041 RPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKF----GRTDKGLVGYVDS 1096
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ + S
Sbjct: 1097 DFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQS 1133
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 136 bits (343), Expect = 5e-34
Identities = 79/157 (50%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ + V+T + +FK S+ QCP E E MS V Y+SAV SLMY +VC
Sbjct: 1072 IKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCS 1131
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+MSN K HW+ V+ IF Y RGT CL F R L GYVD+
Sbjct: 1132 RPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKF----GRTDKGLIGYVDS 1187
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
DYA D D+RRS TGY+FTIG CA+SW+A LQ + S
Sbjct: 1188 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1224
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group]
gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1229
Score = 136 bits (342), Expect = 7e-34
Identities = 79/157 (50%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC* 190
I K+++RFNI +PV+T + +FK S+ QC + E MS V Y+S V SLMY +VC
Sbjct: 1007 IKKVLQRFNIHDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVPYSSVVGSLMYAMVCS 1066
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+M+N K HWK V+ IF Y RGTA CL F R L GYVD+
Sbjct: 1067 RPVLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKF----GRTDKGLVGYVDS 1122
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D+A D D+RRS TGY+FTIG CA+SWKA LQ + S
Sbjct: 1123 DFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQS 1159
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 135 bits (340), Expect = 1e-33
Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Frame = +2
Query: 14 IFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYILVC* 190
I K+++RFN+ + V+T + +FK S+ QCP E E MS V Y+SAV SLMY +VC
Sbjct: 1074 IKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCS 1133
Query: 191 -V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDA 367
LS + LVSR+MSN K HW+ ++ IF Y RGT CL F R L GYVD+
Sbjct: 1134 RPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKF----GRTDKGLIGYVDS 1189
Query: 368 DYADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
DYA D D+RRS TGY+FTIG CA+SW+A LQ + S
Sbjct: 1190 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALS 1226
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 133 bits (335), Expect = 1e-33
Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Frame = +2
Query: 2 QGKDIFKMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*E-EEMSLVLYASAVRSLMYI 178
Q K I +++ RFN++ +PV+T L ++FK SS CPQ E E MS V YASAV SLMY
Sbjct: 234 QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 293
Query: 179 LVC*-V*LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQG 355
+VC L+ + +VSR+M N K HW VK IF Y +GT++I L+F R K + V G
Sbjct: 294 MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVA-G 352
Query: 356 YVDADYADDFDQRRSTTGYIFTIGDCAISWKAELQ 460
+VD+DY D D+RRS +GYIFT+ + AISWKA LQ
Sbjct: 353 FVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQ 387
>gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. scolymus]
Length = 358
Score = 130 bits (328), Expect = 2e-33
Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = +2
Query: 20 KMMKRFNIDKVRPVTTFLTSYFKFSSRQCPQLP*EEE-MSLVLYASAVRSLMYILVC*-V 193
K++KRFN+ + V T + ++FK S+ QCP E+E MS V Y+SAV SLMY ++C
Sbjct: 146 KVLKRFNMYGAKTVNTPIAAHFKLSACQCPDSNEEKEYMSRVPYSSAVGSLMYAMICTRP 205
Query: 194 *LSICIELVSRFMSNLEK*HWKTVK*IFIYRRGTASICLLFQRLKDRKSTVLQGYVDADY 373
L+ + +VSR+M+N + HWK V+ + Y GT C+ F +D +QGYVD+DY
Sbjct: 206 DLAYAVSMVSRYMANPGREHWKAVQWVLRYLSGTRDYCMCFGTSRDG----VQGYVDSDY 261
Query: 374 ADDFDQRRSTTGYIFTIGDCAISWKAELQETMTPS 478
D D RRS TGY+FT+G CAISWKA LQ T+ S
Sbjct: 262 GGDLDGRRSLTGYVFTMGSCAISWKAVLQPTVAVS 296