BLASTX nr result
ID: Ophiopogon24_contig00028444
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00028444
(525 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65519.1| uncharacterized protein A4U43_C07F37940 [Asparagu... 124 4e-31
ref|XP_020274526.1| DNA mismatch repair protein MSH5 isoform X1 ... 126 2e-30
ref|XP_017181722.1| PREDICTED: DNA mismatch repair protein MSH5-... 114 8e-30
gb|PNT12510.1| hypothetical protein POPTR_011G089600v3 [Populus ... 113 1e-28
ref|XP_017184357.1| PREDICTED: DNA mismatch repair protein MSH5-... 114 8e-28
ref|XP_010915350.1| PREDICTED: DNA mismatch repair protein MSH5 ... 116 8e-27
dbj|BAT80700.1| hypothetical protein VIGAN_03029800 [Vigna angul... 105 2e-26
ref|XP_011012101.1| PREDICTED: DNA mismatch repair protein MSH5 ... 115 2e-26
ref|XP_011012097.1| PREDICTED: DNA mismatch repair protein MSH5 ... 115 2e-26
ref|XP_011012096.1| PREDICTED: DNA mismatch repair protein MSH5 ... 115 2e-26
ref|XP_011012095.1| PREDICTED: DNA mismatch repair protein MSH5 ... 115 2e-26
ref|XP_011012092.1| PREDICTED: DNA mismatch repair protein MSH5 ... 115 2e-26
ref|XP_021802991.1| DNA mismatch repair protein MSH5-like, parti... 112 2e-26
ref|XP_021824831.1| DNA mismatch repair protein MSH5 [Prunus avium] 114 3e-26
ref|XP_011012094.1| PREDICTED: DNA mismatch repair protein MSH5 ... 114 5e-26
ref|XP_011012093.1| PREDICTED: DNA mismatch repair protein MSH5 ... 113 9e-26
ref|XP_002279440.1| PREDICTED: DNA mismatch repair protein MSH5 ... 113 9e-26
ref|XP_010644464.1| PREDICTED: DNA mismatch repair protein MSH5 ... 113 9e-26
ref|XP_019073018.1| PREDICTED: DNA mismatch repair protein MSH5 ... 113 9e-26
gb|ONI13347.1| hypothetical protein PRUPE_4G216500 [Prunus persica] 112 1e-25
>gb|ONK65519.1| uncharacterized protein A4U43_C07F37940 [Asparagus officinalis]
Length = 338
Score = 124 bits (311), Expect = 4e-31
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY CVM GHRIGVAYYD+TIRQLYVL++WEDGQGD PLIDLVKY AKPL+IYA TKTE
Sbjct: 76 QVYMACVMQGHRIGVAYYDATIRQLYVLDIWEDGQGDFPLIDLVKYQAKPLVIYASTKTE 135
Query: 283 ESFLSTLQRS 254
ESFL+ LQRS
Sbjct: 136 ESFLAALQRS 145
>ref|XP_020274526.1| DNA mismatch repair protein MSH5 isoform X1 [Asparagus officinalis]
Length = 807
Score = 126 bits (317), Expect = 2e-30
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = -3
Query: 496 KRDLGRSR*KSQVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AK 317
+ ++ + +SQVY CVM GHRIGVAYYD+TIRQLYVL++WEDGQGD PLIDLVKY AK
Sbjct: 2 EEEVAETEVESQVYMACVMQGHRIGVAYYDATIRQLYVLDIWEDGQGDFPLIDLVKYQAK 61
Query: 316 PLIIYACTKTEESFLSTLQRS 254
PL+IYA TKTEESFL+ LQRS
Sbjct: 62 PLVIYASTKTEESFLAALQRS 82
>ref|XP_017181722.1| PREDICTED: DNA mismatch repair protein MSH5-like [Malus domestica]
Length = 110
Score = 114 bits (286), Expect = 8e-30
Identities = 58/94 (61%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+ +GHR+GV+YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPLIIY TK+E
Sbjct: 13 QVYMACIRHGHRVGVSYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQAKPLIIYTSTKSE 72
Query: 283 ESFLSTLQRS-----GFNIQLRTSMAQYMHEHVW 197
ESFLS LQRS F ++L S + + +E W
Sbjct: 73 ESFLSALQRSDGMTEAFTVKLVKS-SIFSYEQAW 105
>gb|PNT12510.1| hypothetical protein POPTR_011G089600v3 [Populus trichocarpa]
Length = 168
Score = 113 bits (283), Expect = 1e-28
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IY TK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLNIYTSTKCE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_017184357.1| PREDICTED: DNA mismatch repair protein MSH5-like [Malus domestica]
Length = 295
Score = 114 bits (286), Expect = 8e-28
Identities = 58/94 (61%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+ +GHR+GV+YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPLIIY TK+E
Sbjct: 54 QVYMACIRHGHRVGVSYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQAKPLIIYTSTKSE 113
Query: 283 ESFLSTLQRS-----GFNIQLRTSMAQYMHEHVW 197
ESFLS LQRS F ++L S + + +E W
Sbjct: 114 ESFLSALQRSDGMTEAFTVKLVKS-SIFSYEQAW 146
>ref|XP_010915350.1| PREDICTED: DNA mismatch repair protein MSH5 [Elaeis guineensis]
Length = 809
Score = 116 bits (290), Expect = 8e-27
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = -3
Query: 496 KRDLGRSR*KSQVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AK 317
+ ++G + +SQVY C+M GHR+G+AYYDS++RQL+V EVWEDG G+ PLIDLVKY AK
Sbjct: 2 EEEVGETEVESQVYMACLMQGHRVGIAYYDSSVRQLFVTEVWEDGNGEFPLIDLVKYQAK 61
Query: 316 PLIIYACTKTEESFLSTLQRS 254
P++IYA TKTEE+ LS LQR+
Sbjct: 62 PVVIYASTKTEEALLSALQRN 82
>dbj|BAT80700.1| hypothetical protein VIGAN_03029800 [Vigna angularis var.
angularis]
Length = 73
Score = 105 bits (261), Expect = 2e-26
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -3
Query: 448 CVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTEESFLS 269
C++NGHRIG++YYDST+RQLYVLEVW+DG P+IDLVKY A PL+IY TK+EESFLS
Sbjct: 3 CILNGHRIGISYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSEESFLS 62
Query: 268 TLQRSG 251
LQ+ G
Sbjct: 63 ALQQKG 68
>ref|XP_011012101.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X8 [Populus
euphratica]
Length = 646
Score = 115 bits (287), Expect = 2e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_011012097.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X6 [Populus
euphratica]
Length = 728
Score = 115 bits (287), Expect = 2e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_011012096.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X5 [Populus
euphratica]
Length = 802
Score = 115 bits (287), Expect = 2e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_011012095.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X4 [Populus
euphratica]
Length = 803
Score = 115 bits (287), Expect = 2e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_011012092.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Populus
euphratica]
Length = 832
Score = 115 bits (287), Expect = 2e-26
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQRSG
Sbjct: 72 ESFLSALQRSG 82
>ref|XP_021802991.1| DNA mismatch repair protein MSH5-like, partial [Prunus avium]
Length = 398
Score = 112 bits (281), Expect = 2e-26
Identities = 56/93 (60%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
Frame = -3
Query: 460 VYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTEE 281
VY C+++GHR+GV+YYDS+IRQL+VLEVWEDG D PLIDLVKY A+PLIIY TK+EE
Sbjct: 1 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQARPLIIYTSTKSEE 60
Query: 280 SFLSTLQRS-----GFNIQLRTSMAQYMHEHVW 197
SFLS LQRS F ++L S + + +E W
Sbjct: 61 SFLSALQRSDGMTEAFTVKLVKS-SIFSYEQAW 92
>ref|XP_021824831.1| DNA mismatch repair protein MSH5 [Prunus avium]
Length = 783
Score = 114 bits (286), Expect = 3e-26
Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++GHR+GV+YYDS+IRQL+VLEVWEDG D PLIDLVKY A+PLIIY TK+E
Sbjct: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQARPLIIYTSTKSE 61
Query: 283 ESFLSTLQRS-----GFNIQLRTSMAQYMHEHVW 197
ESFLS LQRS F ++L S + + +E W
Sbjct: 62 ESFLSALQRSDGMTEAFTVKLVKS-SIFSYEQAW 94
>ref|XP_011012094.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Populus
euphratica]
Length = 806
Score = 114 bits (284), Expect = 5e-26
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSG 251
ESFLS LQR+G
Sbjct: 72 ESFLSALQRNG 82
>ref|XP_011012093.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Populus
euphratica]
Length = 807
Score = 113 bits (282), Expect = 9e-26
Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C ++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPL IYA TK+E
Sbjct: 12 QVYMACFLHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLTIYASTKSE 71
Query: 283 ESFLSTLQRSGFNIQLRT----SMAQYMHEHVW 197
ESFLS LQRS + T + + +E W
Sbjct: 72 ESFLSALQRSDGTTEAPTVKLVKSSIFSYEQAW 104
>ref|XP_002279440.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X7 [Vitis
vinifera]
Length = 807
Score = 113 bits (282), Expect = 9e-26
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPLIIY TK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCE 71
Query: 283 ESFLSTLQRSGFNIQLRT----SMAQYMHEHVW 197
+SFLS LQRS + T + + +E W
Sbjct: 72 DSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAW 104
>ref|XP_010644464.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X4 [Vitis
vinifera]
Length = 863
Score = 113 bits (282), Expect = 9e-26
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPLIIY TK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCE 71
Query: 283 ESFLSTLQRSGFNIQLRT----SMAQYMHEHVW 197
+SFLS LQRS + T + + +E W
Sbjct: 72 DSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAW 104
>ref|XP_019073018.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Vitis
vinifera]
Length = 864
Score = 113 bits (282), Expect = 9e-26
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++GHR+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY AKPLIIY TK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCE 71
Query: 283 ESFLSTLQRSGFNIQLRT----SMAQYMHEHVW 197
+SFLS LQRS + T + + +E W
Sbjct: 72 DSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAW 104
>gb|ONI13347.1| hypothetical protein PRUPE_4G216500 [Prunus persica]
Length = 651
Score = 112 bits (281), Expect = 1e-25
Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 5/94 (5%)
Frame = -3
Query: 463 QVYTTCVMNGHRIGVAYYDSTIRQLYVLEVWEDGQGDLPLIDLVKY*AKPLIIYACTKTE 284
QVY C+++G R+G++YYDS+IRQL+VLEVWEDG D PLIDLVKY A+PLIIYA TK+E
Sbjct: 15 QVYMACILHGQRVGISYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQARPLIIYASTKSE 74
Query: 283 ESFLSTLQRS-----GFNIQLRTSMAQYMHEHVW 197
ESFLS LQRS F ++L S + + +E W
Sbjct: 75 ESFLSALQRSDGMTEAFTVKLVKS-SIFSYEQAW 107