BLASTX nr result

ID: Ophiopogon24_contig00028407 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00028407
         (528 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244205.1| SWI/SNF complex subunit SWI3D-like [Asparagu...   100   4e-21
ref|XP_010936291.1| PREDICTED: SWI/SNF complex subunit SWI3D [El...    68   6e-10
ref|XP_008790351.1| PREDICTED: SWI/SNF complex subunit SWI3D [Ph...    65   4e-09

>ref|XP_020244205.1| SWI/SNF complex subunit SWI3D-like [Asparagus officinalis]
 gb|ONK59623.1| uncharacterized protein A4U43_C08F8370 [Asparagus officinalis]
          Length = 920

 Score =  100 bits (248), Expect = 4e-21
 Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = -1

Query: 363 TNLKDPGSPMLPGEETGPSAVKDGSDSACPMVTSSTKSKDSGEPALPVEVVSSSGNEANE 184
           +N KD G+P+LPGE+ GP +  DGS SA PMV SST  KDSGE +L  + VS++ NE  E
Sbjct: 641 SNPKDLGNPVLPGEQIGPDSTMDGSSSASPMVLSSTNLKDSGESSLQGQAVSTAANEGKE 700

Query: 183 LK-SIGEKPDSVKDSGNLASVDVVEQISNTSMXXXXXXXXXXXESKDSRQKGGTDSTIES 7
            K + G K DSVKDS NLASV+ +EQ+ N SM           E K+ +Q   T+ T+ES
Sbjct: 701 SKLTSGNKADSVKDSDNLASVNGLEQMPNASM---TADKKPPSEDKEYKQNPSTNLTVES 757


>ref|XP_010936291.1| PREDICTED: SWI/SNF complex subunit SWI3D [Elaeis guineensis]
          Length = 989

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 41/116 (35%), Positives = 63/116 (54%)
 Frame = -1

Query: 357  LKDPGSPMLPGEETGPSAVKDGSDSACPMVTSSTKSKDSGEPALPVEVVSSSGNEANELK 178
            +KD      PGE+   SA KD SDSA P+V+S + +K+ G+ A P E    +  + +++K
Sbjct: 714  IKDSVDQASPGEQIMSSAPKDASDSALPVVSSPSNTKEPGDLASPGEKAPIAEKKKDDVK 773

Query: 177  SIGEKPDSVKDSGNLASVDVVEQISNTSMXXXXXXXXXXXESKDSRQKGGTDSTIE 10
            S  +KP  +K++G+LAS D VEQ S+T             E +  +Q  G  S +E
Sbjct: 774  SSEDKPSIMKETGDLASPDKVEQHSDTLKASDTKAISAGLEEQGPQQTTGNGSAVE 829


>ref|XP_008790351.1| PREDICTED: SWI/SNF complex subunit SWI3D [Phoenix dactylifera]
 ref|XP_008790353.1| PREDICTED: SWI/SNF complex subunit SWI3D [Phoenix dactylifera]
          Length = 981

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/118 (33%), Positives = 62/118 (52%)
 Frame = -1

Query: 363  TNLKDPGSPMLPGEETGPSAVKDGSDSACPMVTSSTKSKDSGEPALPVEVVSSSGNEANE 184
            + +KD       GE    SA KD SDS  P+V+S   +K+ G+ A P E   S+  + ++
Sbjct: 704  STIKDSADRASSGEPIMSSAPKDASDSVLPVVSSPNNTKEPGDLASPGEKSPSAEKKIDD 763

Query: 183  LKSIGEKPDSVKDSGNLASVDVVEQISNTSMXXXXXXXXXXXESKDSRQKGGTDSTIE 10
            LKS  +KP  +K++G++AS D VEQ S+T             E ++ +Q  G  S +E
Sbjct: 764  LKSSEDKPSIMKETGDVASPDKVEQQSDTLKASDMKAISAGLEEQEPQQTTGNGSAVE 821


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