BLASTX nr result

ID: Ophiopogon24_contig00028240 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00028240
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277314.1| probable pre-mRNA-splicing factor ATP-depend...    55   9e-06
ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor...    55   9e-06

>ref|XP_020277314.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
           isoform X1 [Asparagus officinalis]
          Length = 725

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   SNFPSCEAKRVLERLYNKRQKEKAESMSR 87
           SNFPSCEAKRVLERLYNKR++EK ES SR
Sbjct: 694 SNFPSCEAKRVLERLYNKREREKGESKSR 722


>ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH2 [Phoenix dactylifera]
          Length = 730

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   SNFPSCEAKRVLERLYNKRQKEKAESMSR 87
           SNFPSCEAKRVLERLYNKR+KEK ES +R
Sbjct: 698 SNFPSCEAKRVLERLYNKREKEKGESKAR 726


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