BLASTX nr result
ID: Ophiopogon24_contig00028174
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00028174
(422 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus o... 152 5e-40
ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C i... 122 2e-29
ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C i... 122 2e-29
gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olito... 121 2e-29
ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania um... 119 1e-28
ref|XP_023882762.1| pre-mRNA-processing protein 40C isoform X2 [... 119 3e-28
ref|XP_023882754.1| pre-mRNA-processing protein 40C isoform X1 [... 119 3e-28
gb|POF22764.1| pre-mrna-processing protein 40c [Quercus suber] 119 3e-28
gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus cap... 116 2e-27
gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao] 115 4e-27
ref|XP_007045322.2| PREDICTED: pre-mRNA-processing protein 40C, ... 115 4e-27
ref|XP_022776501.1| pre-mRNA-processing protein 40C isoform X3 [... 113 2e-26
ref|XP_022776500.1| pre-mRNA-processing protein 40C isoform X2 [... 113 2e-26
ref|XP_022776497.1| pre-mRNA-processing protein 40C isoform X1 [... 113 2e-26
gb|PPR85681.1| hypothetical protein GOBAR_AA35007 [Gossypium bar... 111 6e-26
gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium r... 111 9e-26
gb|KHG18458.1| Transcription elongation regulator 1 [Gossypium a... 111 1e-25
ref|XP_017637434.1| PREDICTED: pre-mRNA-processing protein 40C [... 111 1e-25
ref|XP_016703242.1| PREDICTED: pre-mRNA-processing protein 40C-l... 111 1e-25
ref|XP_016703241.1| PREDICTED: pre-mRNA-processing protein 40C-l... 111 1e-25
>ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus officinalis]
gb|ONK55246.1| uncharacterized protein A4U43_UnF6000 [Asparagus officinalis]
Length = 1105
Score = 152 bits (384), Expect = 5e-40
Identities = 88/146 (60%), Positives = 104/146 (71%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EV+EM+KNQE+D+ K N V++ENT +AEK SAPI +STPA+HTGGRD
Sbjct: 562 IPSEVSEMKKNQESDASKGNMVQDENTNIVAEKVSAPIYISTPAMHTGGRDSMVVRPSGG 621
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTV-----NVNSKDKVK 77
SALDLIKKKLQEAG+ VTSTPL PS I S +ELNGSRAAD V ++NSKDK K
Sbjct: 622 QVSSSALDLIKKKLQEAGSPVTSTPLSPSAI-STTELNGSRAADAVAKGQQSMNSKDKAK 680
Query: 76 DAN-EGNMXXXXXXXXDAESGPSKEE 2
DAN E NM DAESGP+KEE
Sbjct: 681 DANGEANMSDSSSDSDDAESGPTKEE 706
>ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Elaeis
guineensis]
Length = 1066
Score = 122 bits (306), Expect = 2e-29
Identities = 77/146 (52%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
VPAEV E+RK+QE+D+LK NA + N +A+K SAPI+MS PAV TGGRD
Sbjct: 533 VPAEVLELRKSQESDALKGNANQLTN---VADKGSAPISMSAPAVETGGRDSMALRTSGA 589
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLP-PSTIFSISELNGSRAADTV-----NVNSKDKV 80
SALDL+KKKLQ+AGT VTS+P+P P + S+LNGS+A +T NSKDKV
Sbjct: 590 AVSSSALDLVKKKLQDAGTPVTSSPVPTPGPV--ASDLNGSKAVETAPKGQQGTNSKDKV 647
Query: 79 KDANEGNMXXXXXXXXDAESGPSKEE 2
KD +GNM D ESGP+KEE
Sbjct: 648 KD--DGNMSDSSSDSDDEESGPTKEE 671
>ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Elaeis
guineensis]
Length = 1097
Score = 122 bits (306), Expect = 2e-29
Identities = 77/146 (52%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
VPAEV E+RK+QE+D+LK NA + N +A+K SAPI+MS PAV TGGRD
Sbjct: 564 VPAEVLELRKSQESDALKGNANQLTN---VADKGSAPISMSAPAVETGGRDSMALRTSGA 620
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLP-PSTIFSISELNGSRAADTV-----NVNSKDKV 80
SALDL+KKKLQ+AGT VTS+P+P P + S+LNGS+A +T NSKDKV
Sbjct: 621 AVSSSALDLVKKKLQDAGTPVTSSPVPTPGPV--ASDLNGSKAVETAPKGQQGTNSKDKV 678
Query: 79 KDANEGNMXXXXXXXXDAESGPSKEE 2
KD +GNM D ESGP+KEE
Sbjct: 679 KD--DGNMSDSSSDSDDEESGPTKEE 702
>gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olitorius]
Length = 631
Score = 121 bits (304), Expect = 2e-29
Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE+RK Q++D+ K +AV N +AEK SAP+++S PAV TGGRD
Sbjct: 53 IPSEVAELRKKQDSDASKEHAVPVLNVDVVAEKGSAPVSLSAPAVSTGGRDAIPLRTPVV 112
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKDA 71
SALDLIKKKLQE+G +S+P+P + + ELNGSRA D + NSKD++KDA
Sbjct: 113 PGSSSALDLIKKKLQESGVPSSSSPVPVMPVPAAQELNGSRAVDVKGLQSENSKDQLKDA 172
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +GN+ D +SGPSKEE
Sbjct: 173 NGDGNISDSSSDSEDTDSGPSKEE 196
>ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania umbratica]
Length = 815
Score = 119 bits (299), Expect = 1e-28
Identities = 69/144 (47%), Positives = 90/144 (62%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE+RK Q+ND K +AV N +AEK S PI++S PAV+TGGRD
Sbjct: 271 IPSEVAELRKKQDNDFSKEHAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 330
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKDA 71
SALDLIKKKLQ++G +S+P+P + + ELNGSR D + NSKDK+KDA
Sbjct: 331 PGSSSALDLIKKKLQDSGVPSSSSPVPVMPVTAAQELNGSRTVDVKGLQSENSKDKLKDA 390
Query: 70 -NEGNMXXXXXXXXDAESGPSKEE 2
+GN+ D +SGPSKEE
Sbjct: 391 TGDGNISDSSSDSEDTDSGPSKEE 414
>ref|XP_023882762.1| pre-mRNA-processing protein 40C isoform X2 [Quercus suber]
Length = 999
Score = 119 bits (297), Expect = 3e-28
Identities = 69/146 (47%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E++K Q+ D+LK +++ T EK SAPI+++ PA++TGGRD
Sbjct: 454 IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 513
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTV-----NVNSKDKVK 77
SALDLIKKKLQ++GT VTS+P P + + SELNGSRA DT+ + S++KVK
Sbjct: 514 PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 573
Query: 76 DAN-EGNMXXXXXXXXDAESGPSKEE 2
DAN +GNM DA+SGP+KEE
Sbjct: 574 DANGDGNMTESSSDSEDADSGPTKEE 599
>ref|XP_023882754.1| pre-mRNA-processing protein 40C isoform X1 [Quercus suber]
Length = 1001
Score = 119 bits (297), Expect = 3e-28
Identities = 69/146 (47%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E++K Q+ D+LK +++ T EK SAPI+++ PA++TGGRD
Sbjct: 456 IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 515
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTV-----NVNSKDKVK 77
SALDLIKKKLQ++GT VTS+P P + + SELNGSRA DT+ + S++KVK
Sbjct: 516 PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 575
Query: 76 DAN-EGNMXXXXXXXXDAESGPSKEE 2
DAN +GNM DA+SGP+KEE
Sbjct: 576 DANGDGNMTESSSDSEDADSGPTKEE 601
>gb|POF22764.1| pre-mrna-processing protein 40c [Quercus suber]
Length = 1052
Score = 119 bits (297), Expect = 3e-28
Identities = 69/146 (47%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E++K Q+ D+LK +++ T EK SAPI+++ PA++TGGRD
Sbjct: 507 IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 566
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTV-----NVNSKDKVK 77
SALDLIKKKLQ++GT VTS+P P + + SELNGSRA DT+ + S++KVK
Sbjct: 567 PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 626
Query: 76 DAN-EGNMXXXXXXXXDAESGPSKEE 2
DAN +GNM DA+SGP+KEE
Sbjct: 627 DANGDGNMTESSSDSEDADSGPTKEE 652
>gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus capsularis]
Length = 896
Score = 116 bits (291), Expect = 2e-27
Identities = 70/145 (48%), Positives = 92/145 (63%), Gaps = 5/145 (3%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSI-AEKTSAPINMSTPAVHTGGRDXXXXXXXX 245
+P+EVAE+RK Q++D+ K +AV N + AEK SAP+++S PAV TGGRD
Sbjct: 351 IPSEVAELRKKQDSDASKEHAVPVLNVVDVVAEKGSAPVSLSAPAVSTGGRDAIPLRTPV 410
Query: 244 XXXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKD 74
SALDLIKKKLQE+G +S+P+P + + ELNGSR D + NSKDK+KD
Sbjct: 411 VPGSSSALDLIKKKLQESGVPSSSSPVPVMPVPAAQELNGSREVDVKGLQSENSKDKLKD 470
Query: 73 AN-EGNMXXXXXXXXDAESGPSKEE 2
AN +GN+ D +SGPSKEE
Sbjct: 471 ANGDGNISDSSSDSEDTDSGPSKEE 495
>gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao]
Length = 816
Score = 115 bits (288), Expect = 4e-27
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE+RK Q+ND K +AV N +AEK S PI++S PAV TGGRD
Sbjct: 271 IPSEVAELRKKQDNDVSKEHAVPVPNIDVVAEKGSTPISLSAPAVSTGGRDAMPLRTSVV 330
Query: 241 XXXXSALDLIKKKLQEAGT-QVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKD 74
SALDLIKKKLQ++G +S+ +P + + ELNGSRA D + NSKDK+KD
Sbjct: 331 PGSSSALDLIKKKLQDSGVPSSSSSSVPVMPVTAAQELNGSRAVDVKGLQSENSKDKLKD 390
Query: 73 AN-EGNMXXXXXXXXDAESGPSKEE 2
AN +GN+ D +SGPSKEE
Sbjct: 391 ANGDGNISDSSSDSEDTDSGPSKEE 415
>ref|XP_007045322.2| PREDICTED: pre-mRNA-processing protein 40C, partial [Theobroma
cacao]
Length = 899
Score = 115 bits (288), Expect = 4e-27
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE+RK Q+ND K +AV N +AEK S PI++S PAV TGGRD
Sbjct: 354 IPSEVAELRKKQDNDVSKEHAVPVPNIDVVAEKGSTPISLSAPAVSTGGRDAMPLRTSVV 413
Query: 241 XXXXSALDLIKKKLQEAGT-QVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKD 74
SALDLIKKKLQ++G +S+ +P + + ELNGSRA D + NSKDK+KD
Sbjct: 414 PGSSSALDLIKKKLQDSGVPSSSSSSVPVMPVTAAQELNGSRAVDVKGLQSENSKDKLKD 473
Query: 73 AN-EGNMXXXXXXXXDAESGPSKEE 2
AN +GN+ D +SGPSKEE
Sbjct: 474 ANGDGNISDSSSDSEDTDSGPSKEE 498
>ref|XP_022776501.1| pre-mRNA-processing protein 40C isoform X3 [Durio zibethinus]
Length = 822
Score = 113 bits (283), Expect = 2e-26
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE RK Q++D K NAV N + EK S PI++S PAV+TGGRD
Sbjct: 275 IPSEVAESRKKQDSDLSKENAVPVPNIDVVTEKGSTPISLSAPAVNTGGRDAMPLRTSVV 334
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKDA 71
SALDLIKKKLQ++G +S+P+P + + ELNGSRA D + NSKDK+KDA
Sbjct: 335 PGSSSALDLIKKKLQDSGVP-SSSPVPVMPVTAAQELNGSRAVDVKGLQGENSKDKLKDA 393
Query: 70 -NEGNMXXXXXXXXDAESGPSKEE 2
+GN+ D ++GPSKEE
Sbjct: 394 TGDGNISDSSSDSEDTDNGPSKEE 417
>ref|XP_022776500.1| pre-mRNA-processing protein 40C isoform X2 [Durio zibethinus]
Length = 853
Score = 113 bits (283), Expect = 2e-26
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE RK Q++D K NAV N + EK S PI++S PAV+TGGRD
Sbjct: 306 IPSEVAESRKKQDSDLSKENAVPVPNIDVVTEKGSTPISLSAPAVNTGGRDAMPLRTSVV 365
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKDA 71
SALDLIKKKLQ++G +S+P+P + + ELNGSRA D + NSKDK+KDA
Sbjct: 366 PGSSSALDLIKKKLQDSGVP-SSSPVPVMPVTAAQELNGSRAVDVKGLQGENSKDKLKDA 424
Query: 70 -NEGNMXXXXXXXXDAESGPSKEE 2
+GN+ D ++GPSKEE
Sbjct: 425 TGDGNISDSSSDSEDTDNGPSKEE 448
>ref|XP_022776497.1| pre-mRNA-processing protein 40C isoform X1 [Durio zibethinus]
ref|XP_022776498.1| pre-mRNA-processing protein 40C isoform X1 [Durio zibethinus]
ref|XP_022776499.1| pre-mRNA-processing protein 40C isoform X1 [Durio zibethinus]
Length = 887
Score = 113 bits (283), Expect = 2e-26
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P+EVAE RK Q++D K NAV N + EK S PI++S PAV+TGGRD
Sbjct: 340 IPSEVAESRKKQDSDLSKENAVPVPNIDVVTEKGSTPISLSAPAVNTGGRDAMPLRTSVV 399
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNV---NSKDKVKDA 71
SALDLIKKKLQ++G +S+P+P + + ELNGSRA D + NSKDK+KDA
Sbjct: 400 PGSSSALDLIKKKLQDSGVP-SSSPVPVMPVTAAQELNGSRAVDVKGLQGENSKDKLKDA 458
Query: 70 -NEGNMXXXXXXXXDAESGPSKEE 2
+GN+ D ++GPSKEE
Sbjct: 459 TGDGNISDSSSDSEDTDNGPSKEE 482
>gb|PPR85681.1| hypothetical protein GOBAR_AA35007 [Gossypium barbadense]
Length = 535
Score = 111 bits (278), Expect = 6e-26
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 357 IPNEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 416
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 417 PGSSSALDLIKKKLQDPGVP-SSSPVPVMPVTATHELNGSRAVDVKGLQSESNKDKLKDA 475
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 476 NGDGSISDSSSDSEDADSGPSKEE 499
>gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
Length = 736
Score = 111 bits (278), Expect = 9e-26
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 192 IPNEVTELRKKQDSEVSKENAVSVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 251
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 252 PGSSSALDLIKKKLQDPGVP-SSSPVPVVPVTATHELNGSRAVDVKGLQSESNKDKLKDA 310
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 311 NGDGSISDSSSDSEDADSGPSKEE 334
>gb|KHG18458.1| Transcription elongation regulator 1 [Gossypium arboreum]
Length = 876
Score = 111 bits (278), Expect = 1e-25
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 296 IPYEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 355
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 356 PGSSSALDLIKKKLQDPGVP-SSSPVPVMPVTATHELNGSRAVDVKGLQSESNKDKLKDA 414
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 415 NGDGSISDSSSDSEDADSGPSKEE 438
>ref|XP_017637434.1| PREDICTED: pre-mRNA-processing protein 40C [Gossypium arboreum]
Length = 885
Score = 111 bits (278), Expect = 1e-25
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 342 IPYEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVP-SSSPVPVMPVTATHELNGSRAVDVKGLQSESNKDKLKDA 460
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEE 484
>ref|XP_016703242.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2
[Gossypium hirsutum]
Length = 885
Score = 111 bits (278), Expect = 1e-25
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 342 IPNEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVP-SSSPVPVMPVTATHELNGSRAVDVKGLQSESNKDKLKDA 460
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEE 484
>ref|XP_016703241.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1
[Gossypium hirsutum]
Length = 886
Score = 111 bits (278), Expect = 1e-25
Identities = 68/144 (47%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = -2
Query: 421 VPAEVAEMRKNQENDSLKANAVEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 242
+P EV E+RK Q+++ K NAV N +AEK S PI++S PAV+TGGRD
Sbjct: 342 IPNEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401
Query: 241 XXXXSALDLIKKKLQEAGTQVTSTPLPPSTIFSISELNGSRAADTVNVNS---KDKVKDA 71
SALDLIKKKLQ+ G +S+P+P + + ELNGSRA D + S KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVP-SSSPVPVMPVTATHELNGSRAVDVKGLQSESNKDKLKDA 460
Query: 70 N-EGNMXXXXXXXXDAESGPSKEE 2
N +G++ DA+SGPSKEE
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEE 484