BLASTX nr result
ID: Ophiopogon24_contig00027976
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027976
(556 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ50148.1| putative RNA-directed DNA polymerase [Rosa chinen... 98 2e-22
gb|PRQ53193.1| putative RNA-directed DNA polymerase [Rosa chinen... 103 2e-22
gb|PRQ16677.1| putative RNA-directed DNA polymerase [Rosa chinen... 103 2e-22
gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinen... 102 1e-21
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 102 1e-21
gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinen... 96 2e-19
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 94 7e-19
gb|AQY61299.1| Pol [Coffea canephora] 92 3e-18
gb|AQY61300.1| Pol [Coffea eugenioides] 91 6e-18
gb|AQY61295.1| Pol [Coffea arabica] 91 6e-18
gb|AQY61297.1| Pol [Coffea canephora] 89 3e-17
gb|OMO49732.1| Exostosin-like protein [Corchorus capsularis] 88 7e-17
gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea] 88 9e-17
emb|CAN72468.1| hypothetical protein VITISV_006796 [Vitis vinifera] 86 1e-16
ref|XP_016480656.1| PREDICTED: uncharacterized protein LOC107801... 87 1e-16
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 87 2e-16
ref|XP_009772691.1| PREDICTED: uncharacterized protein LOC104223... 83 3e-16
ref|XP_015163291.1| PREDICTED: uncharacterized protein LOC107060... 84 4e-16
gb|KYP77193.1| Retrovirus-related Pol polyprotein from transposo... 85 7e-16
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 85 7e-16
>gb|PRQ50148.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 160
Score = 97.8 bits (242), Expect = 2e-22
Identities = 55/108 (50%), Positives = 69/108 (63%), Gaps = 18/108 (16%)
Frame = -1
Query: 400 KMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG---- 233
++++ DDIE RS+ +C +R DW K KE I +LDSL K +VFG VV TPP+VKPVG
Sbjct: 28 EIIEHDDIEPRSVAECQQRADWPKWKEAIQAELDSLTKRQVFGPVVLTPPSVKPVGHKWV 87
Query: 232 -------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSP+ DVITF YL+
Sbjct: 88 FVRKRNEKNEVLRYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLV 135
>gb|PRQ53193.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 945
Score = 103 bits (258), Expect = 2e-22
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 18/108 (16%)
Frame = -1
Query: 400 KMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG---- 233
++++TDDIE RS+D+C RR DW K K+ I +LDSL K KVFG +V PPN KPVG
Sbjct: 501 EIIETDDIEPRSVDECQRRADWPKWKDAIQAELDSLTKRKVFGKIVPIPPNTKPVGHKWV 560
Query: 232 -------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSP+ DVITF YL+
Sbjct: 561 FVRKRNEKNEIVRYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLV 608
>gb|PRQ16677.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1276
Score = 103 bits (258), Expect = 2e-22
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 18/108 (16%)
Frame = -1
Query: 400 KMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG---- 233
++++TDDIE RS+D+C RR DW K K+ I +LDSL K KVFG +V PPN KPVG
Sbjct: 706 EIIETDDIEPRSVDECQRRADWPKWKDAIQAELDSLTKRKVFGKIVPIPPNTKPVGHKWV 765
Query: 232 -------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSP+ DVITF YL+
Sbjct: 766 FVRKRNEKNEIVRYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLV 813
>gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 797
Score = 102 bits (253), Expect = 1e-21
Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 18/108 (16%)
Frame = -1
Query: 400 KMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG---- 233
+++ +DD+E RS+D+C RR DW K KE I V+LDSL K KVFG VV TP +VKPVG
Sbjct: 240 EIITSDDVEPRSVDECQRRDDWPKWKEAIQVELDSLTKRKVFGPVVPTPRHVKPVGFKWV 299
Query: 232 -------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSP+ DVITF YLI
Sbjct: 300 FVRKRNEGNEIVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYLI 347
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 102 bits (253), Expect = 1e-21
Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 18/114 (15%)
Frame = -1
Query: 418 HEYKGLKMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKP 239
H KG+ ++ DDIE RS+++C RR DW K K+ I V+LDSL K +VFG V TPP+VKP
Sbjct: 930 HIAKGI--IEYDDIEPRSVEECQRRADWPKWKDAIQVELDSLTKRQVFGPVTQTPPSVKP 987
Query: 238 VG-----------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
VG YKSRL+AQ FS P ID ETYSP+ DVITF YL+
Sbjct: 988 VGHKWVFVRKRNEKNEVVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYLV 1041
>gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 725
Score = 95.5 bits (236), Expect = 2e-19
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 18/107 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
+++ DDIE RS+++C RR DW K K I V+LDSL K +VFG + TPP++KPVG
Sbjct: 154 IIEHDDIEPRSVEECQRRADWPKWKNAIQVELDSLTKRQVFGPITLTPPSIKPVGHKWVF 213
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETY P+ DVITF YL+
Sbjct: 214 VRKRNEKNKVVRYKARLVAQGFSQRPGIDYEETYYPVMDVITFRYLV 260
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 93.6 bits (231), Expect = 7e-19
Identities = 53/108 (49%), Positives = 67/108 (62%), Gaps = 18/108 (16%)
Frame = -1
Query: 400 KMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG---- 233
++++ DDIE RS+ +C R DW K K I +LDSL K +VFG V+ TPP+VKPVG
Sbjct: 302 EIIEHDDIEPRSVAECQNRADWPKWKVAIQAELDSLTKRQVFGPVMLTPPSVKPVGHKWV 361
Query: 232 -------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSP+ DVITF YL+
Sbjct: 362 FVRKRNEKNEVLLYKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLV 409
>gb|AQY61299.1| Pol [Coffea canephora]
Length = 1160
Score = 92.0 bits (227), Expect = 3e-18
Identities = 53/109 (48%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + +D E RS+D+C R DW K K+ I +LDSL K KVFG VV TP VKPVG
Sbjct: 616 MAEDEDHEPRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTPEGVKPVGYKWVF 675
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLIVF 125
YK+RL+AQ FS P D ETYSP+ D ITF YL+ F
Sbjct: 676 VRKRNEKNEIVRYKARLVAQGFSQRPRFDYDETYSPVVDAITFRYLVSF 724
>gb|AQY61300.1| Pol [Coffea eugenioides]
Length = 1160
Score = 91.3 bits (225), Expect = 6e-18
Identities = 53/109 (48%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + +D E RS+D+C R DW K K+ I +LDSL K KVFG VV TP VKPVG
Sbjct: 616 MAEDEDHEPRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTPEGVKPVGYKWVF 675
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLIVF 125
YK+RL+AQ FS P D ETYSP+ D ITF YL+ F
Sbjct: 676 VRKRNEKNEIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSF 724
>gb|AQY61295.1| Pol [Coffea arabica]
Length = 1160
Score = 91.3 bits (225), Expect = 6e-18
Identities = 53/109 (48%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + +D E RS+D+C R DW K K+ I +LDSL K KVFG VV TP VKPVG
Sbjct: 616 MAEDEDHELRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTPEGVKPVGYKWVF 675
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLIVF 125
YK+RL+AQ FS P D ETYSP+ D ITF YL+ F
Sbjct: 676 VRKRNEKNEIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSF 724
>gb|AQY61297.1| Pol [Coffea canephora]
Length = 1045
Score = 89.4 bits (220), Expect = 3e-17
Identities = 51/109 (46%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + +D E RS+D+C R DW K K+ I +LDSL K KVFG VV TP ++PVG
Sbjct: 501 MAEDEDHEPRSVDECRGRNDWPKWKDAIQSELDSLAKRKVFGPVVQTPEGIEPVGYKWVF 560
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLIVF 125
YK+RL+AQ FS P D ETYSP+ D ITF YL+ F
Sbjct: 561 VRKRNEKNEIVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSF 609
>gb|OMO49732.1| Exostosin-like protein [Corchorus capsularis]
Length = 1376
Score = 88.2 bits (217), Expect = 7e-17
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 18/131 (13%)
Frame = -1
Query: 469 CN*LLEDNEINVSVRWQHEYKGLKMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLK 290
CN + + NEI + V + + + DD E SI +C +R DW K +E IH +L SL
Sbjct: 837 CNEIWDRNEIIIDVAFA--FSVAHEIMNDDYEPWSITECRQRQDWPKWEEAIHAELTSLA 894
Query: 289 KLKVFGSVVSTPPNVKPVG-----------------YKSRLMAQDFSPHPEID-*ETYSP 164
K +VFG + TP NVKPVG YK+RL+AQ FS P ID ETYSP
Sbjct: 895 KREVFGPITKTPNNVKPVGFKWVFVRKRNEKNEVVRYKARLVAQGFSQRPGIDYDETYSP 954
Query: 163 ITDVITFHYLI 131
+ + ITF +LI
Sbjct: 955 VMNTITFRFLI 965
>gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]
Length = 692
Score = 87.8 bits (216), Expect = 9e-17
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 18/107 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + D+E R +++C ++ DW K KEV+ +LDSL K +VFG VV TP +VKPVG
Sbjct: 214 MQENKDLEPRLVEECRQKNDWPKWKEVMKAELDSLAKREVFGPVVRTPEDVKPVGYQWVF 273
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RLMAQ FS P ID ETYSP+ D IT YL+
Sbjct: 274 VRKRNKKNEVVRYKARLMAQGFSQRPGIDYEETYSPVMDAITLSYLV 320
>emb|CAN72468.1| hypothetical protein VITISV_006796 [Vitis vinifera]
Length = 279
Score = 85.5 bits (210), Expect = 1e-16
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Frame = -1
Query: 385 DDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKP------VGYKS 224
+D E R++++C R DW K KE I +L+SL K +VFG VV TP +VKP + YK
Sbjct: 99 EDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPGWNNEIIRYKX 158
Query: 223 RLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
RL+AQ FS P ID ETYSP+ D ITF +LI
Sbjct: 159 RLVAQGFSQRPXIDYEETYSPVMDAITFRFLI 190
>ref|XP_016480656.1| PREDICTED: uncharacterized protein LOC107801782 [Nicotiana tabacum]
Length = 420
Score = 86.7 bits (213), Expect = 1e-16
Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 18/107 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVGY---- 230
M + D+E +SID+C RR DW K K+ I V+L SL+K +VFG +V T VKPVGY
Sbjct: 25 MQQDGDLEPKSIDECRRRNDWPKWKDAIQVELASLEKHEVFGPIVQTLEGVKPVGYKWVF 84
Query: 229 -------------KSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
K+RL+AQ FS +ID ETYSP+ D ITF YLI
Sbjct: 85 VRKQNEKGEIIRHKARLVAQGFSQRHDIDYMETYSPVVDAITFRYLI 131
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 18/80 (22%)
Frame = -1
Query: 316 IHVKLDSLKKLKVFGSVVSTPPNVKPVGY-----------------KSRLMAQDFSPHPE 188
I +K+ K +VFG +V TP VKPVGY K+RL+AQ FS +
Sbjct: 159 IFMKIPEGFKHEVFGPIVQTPEGVKPVGYKWVFVRKQNEKGEIIRHKARLVAQGFSQRHD 218
Query: 187 ID-*ETYSPITDVITFHYLI 131
ID ETYSP+ D ITF YLI
Sbjct: 219 IDYMETYSPVVDAITFRYLI 238
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 18/80 (22%)
Frame = -1
Query: 316 IHVKLDSLKKLKVFGSVVSTPPNVKPVGY-----------------KSRLMAQDFSPHPE 188
I +K+ K +VFG +V TP VKPVGY K+RL+AQ FS +
Sbjct: 266 IFMKIPEGFKHEVFGPIVQTPEGVKPVGYKWVFVRKQNEKGEIIRHKARLVAQGFSQRHD 325
Query: 187 ID-*ETYSPITDVITFHYLI 131
ID ETYSP+ D ITF YLI
Sbjct: 326 IDYMETYSPVVDAITFRYLI 345
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 86.7 bits (213), Expect = 2e-16
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Frame = -1
Query: 385 DDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG--------- 233
+D++ RS+++C R DW K KEVI +L+SL K ++FG +V TP +VKP+G
Sbjct: 136 EDLKPRSVEECRHRNDWPKWKEVIQAELNSLTKREIFGPIVKTPEDVKPIGYKWVFVRKC 195
Query: 232 --------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P +D ETYSP+ D ITF +LI
Sbjct: 196 DENNEIIRYKARLVAQGFSQRPGVDYEETYSPVIDAITFRFLI 238
>ref|XP_009772691.1| PREDICTED: uncharacterized protein LOC104223039 [Nicotiana
sylvestris]
Length = 229
Score = 83.2 bits (204), Expect = 3e-16
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 18/103 (17%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + D+E +SID+C +R DW K K I +L SL+K +VFG +V TP VKPVG
Sbjct: 126 MQQDVDLEPKSIDECRQRNDWPKWKNAIQTELASLEKHEVFGPIVRTPEGVKPVGYKWVF 185
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITF 143
YK+RL+AQ FS P+ID ETYSP+ D ITF
Sbjct: 186 VRKQNEKGEVVRYKARLVAQGFSQRPDIDYMETYSPVVDAITF 228
>ref|XP_015163291.1| PREDICTED: uncharacterized protein LOC107060211 [Solanum tuberosum]
Length = 288
Score = 84.0 bits (206), Expect = 4e-16
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 18/107 (16%)
Frame = -1
Query: 397 MMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG----- 233
M + +D+E + +++C +R DW K K+ I +L SL+K +VFG +V TP VKPVG
Sbjct: 1 MQQGEDVEPKFVNECRQRNDWPKWKDAIQAELTSLEKREVFGPIVRTPEGVKPVGYKWIF 60
Query: 232 ------------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P+ID ETYS + D ITF YLI
Sbjct: 61 VRKRNEKGEVVRYKARLVAQGFSQRPDIDYVETYSLVVDTITFRYLI 107
>gb|KYP77193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 588
Score = 85.1 bits (209), Expect = 7e-16
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 18/124 (14%)
Frame = -1
Query: 448 NEINVSVRWQHEYKGLKMMKTDDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGS 269
N +N+ + + ++ +D E +SI+ C +R DW K K+ I +LDSL K KVFG
Sbjct: 312 NNVNIDDVFAYNIALNEINDIEDQEPKSINDCRQRNDWPKWKDAIEAELDSLAKRKVFGP 371
Query: 268 VVSTPPNVKPVG-----------------YKSRLMAQDFSPHPEID-*ETYSPITDVITF 143
V+ TP VKP+G YK+RL+AQ FS P ID ETYSP+ D TF
Sbjct: 372 VLRTPKGVKPIGYKWVFVRKRNENGEIVRYKARLVAQGFSQRPGIDFEETYSPVVDANTF 431
Query: 142 HYLI 131
YLI
Sbjct: 432 RYLI 435
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 85.1 bits (209), Expect = 7e-16
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
Frame = -1
Query: 385 DDIERRSIDKC*RRIDWSKNKEVIHVKLDSLKKLKVFGSVVSTPPNVKPVG--------- 233
+D E R++++C R DW K KE I +L+SL K +VFG +V TP +VKPVG
Sbjct: 163 EDPEPRNVEECRHRNDWPKWKEAIQAELNSLTKREVFGPIVQTPEDVKPVGYKWVFVRKP 222
Query: 232 --------YKSRLMAQDFSPHPEID-*ETYSPITDVITFHYLI 131
YK+RL+AQ FS P ID ETYSPI D ITF +LI
Sbjct: 223 NENNEIIRYKARLVAQGFSQRPGIDYEETYSPIMDAITFRFLI 265