BLASTX nr result
ID: Ophiopogon24_contig00027932
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027932
(428 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342093.1| PREDICTED: F-box protein SKIP23-like [Solanu... 45 3e-06
ref|XP_016497057.1| PREDICTED: F-box protein SKIP23-like [Nicoti... 42 3e-06
ref|XP_009778088.1| PREDICTED: F-box protein SKIP23-like [Nicoti... 42 3e-06
ref|XP_008777991.1| PREDICTED: F-box protein At2g26160-like isof... 52 3e-06
ref|XP_015071769.1| PREDICTED: F-box protein SKIP23-like [Solanu... 44 5e-06
ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanu... 44 5e-06
ref|XP_008777994.1| PREDICTED: F-box protein SKIP23-like isoform... 51 5e-06
ref|XP_009400389.1| PREDICTED: putative F-box protein At1g65770 ... 55 7e-06
ref|XP_019255895.1| PREDICTED: F-box protein SKIP23-like [Nicoti... 41 9e-06
gb|OIS97053.1| f-box protein skip23 [Nicotiana attenuata] 41 9e-06
>ref|XP_006342093.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
ref|XP_006342094.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 402
Score = 44.7 bits (104), Expect(2) = 3e-06
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
+L I KL L DY+ F +VCPSWR T A P NLP Q P LM+P N
Sbjct: 20 LLDTIVNKLIDLRDYLHFRAVCPSWRSSTPATPKNLPCQLPWLMLPKN 67
Score = 33.9 bits (76), Expect(2) = 3e-06
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = -3
Query: 273 RDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R FF+ + ++ L+LPEA ++R + S L+++ PSIF+ NP T
Sbjct: 72 RGFFNFVDNKVHFLNLPEASNSR----RRCGSSHGWLIIVDESPSIFVINPLT 120
>ref|XP_016497057.1| PREDICTED: F-box protein SKIP23-like [Nicotiana tabacum]
Length = 394
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
+L I KL L DY+SF +VC +WR T A P NLP Q P LM+P N
Sbjct: 14 LLDTIVNKLINLRDYLSFRAVCSNWRSSTPATPKNLPCQFPWLMLPKN 61
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 285 RHRIRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R R FF+L + +L L+LPEA + R + S L+++ PSIF+ NP T
Sbjct: 62 RSNRRGFFNLLDNKLHFLNLPEASNRR----RRCGSSHGWLIIVDESPSIFIINPLT 114
>ref|XP_009778088.1| PREDICTED: F-box protein SKIP23-like [Nicotiana sylvestris]
ref|XP_009778089.1| PREDICTED: F-box protein SKIP23-like [Nicotiana sylvestris]
Length = 394
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
+L I KL L DY+SF +VC +WR T A P NLP Q P LM+P N
Sbjct: 14 LLDTIVNKLINLRDYLSFRAVCSNWRSSTPATPKNLPCQFPWLMLPKN 61
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 285 RHRIRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R R FF+L + +L L+LPEA + R + S L+++ PSIF+ NP T
Sbjct: 62 RSNRRGFFNLLDNKLHFLNLPEASNRR----RRCGSSHGWLIIVDESPSIFIINPLT 114
>ref|XP_008777991.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Phoenix
dactylifera]
ref|XP_008777993.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Phoenix
dactylifera]
ref|XP_017696244.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Phoenix
dactylifera]
ref|XP_017696245.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Phoenix
dactylifera]
Length = 382
Score = 52.0 bits (123), Expect(2) = 3e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = -1
Query: 425 LRRISLKLTGL--DYISFLSVCPSWRTAAVPLNLPPQTPILMIPY 297
L + K GL DYI F SVC SWR+AA+P NL PQ P+L++PY
Sbjct: 27 LLELIAKKVGLLSDYIRFRSVCKSWRSAALPANLRPQRPLLLLPY 71
Score = 26.6 bits (57), Expect(2) = 3e-06
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 276 IRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFTTHPSFF 97
+R FFSL + ILSLPE+ A++++ +H + + +
Sbjct: 77 VRPFFSLATNSVRILSLPESY--------------AQVILASSHGWLLMLR----GTALS 118
Query: 96 LFSPFTEARIPLP 58
L +P T A+I LP
Sbjct: 119 LLNPVTRAQIRLP 131
>ref|XP_015071769.1| PREDICTED: F-box protein SKIP23-like [Solanum pennellii]
Length = 402
Score = 44.3 bits (103), Expect(2) = 5e-06
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -1
Query: 392 DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
DY+ F +VCPSWR T A P NLP Q P LM+P N
Sbjct: 33 DYLHFRAVCPSWRSSTPATPKNLPCQLPWLMLPKN 67
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 273 RDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R FF+ + ++ L+LPEA + R + S L+++ PSIF+ NP T
Sbjct: 72 RGFFNFVDNKVHFLNLPEASNNR----RRCGSSHGWLIIVDESPSIFVINPLT 120
>ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
Length = 402
Score = 44.3 bits (103), Expect(2) = 5e-06
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -1
Query: 392 DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
DY+ F +VCPSWR T A P NLP Q P LM+P N
Sbjct: 33 DYLHFRAVCPSWRSSTPATPKNLPCQLPWLMLPKN 67
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -3
Query: 273 RDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R FF+ + ++ L+LPEA +R + S L+++ PSIF+ NP T
Sbjct: 72 RGFFNFVDNKVHFLNLPEASSSR----RRCGSSHGWLIIVDESPSIFVINPLT 120
>ref|XP_008777994.1| PREDICTED: F-box protein SKIP23-like isoform X2 [Phoenix
dactylifera]
Length = 378
Score = 51.2 bits (121), Expect(2) = 5e-06
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWRTAAVPLNLPPQTPILMIPY 297
+L I+ KL + DYI F +VC SWR+AA+P NL PQ P+L++PY
Sbjct: 23 LLELIAKKLALIGDYIHFRAVCKSWRSAALPANLRPQRPLLLLPY 67
Score = 26.6 bits (57), Expect(2) = 5e-06
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 276 IRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFTTHPSFF 97
+R FFSL + ILSLPE+ A++++ +H + + +
Sbjct: 73 VRPFFSLATNSVRILSLPESY--------------AQVILASSHGWLLMLR----GTALS 114
Query: 96 LFSPFTEARIPLP 58
L +P T A+I LP
Sbjct: 115 LLNPVTRAQIRLP 127
>ref|XP_009400389.1| PREDICTED: putative F-box protein At1g65770 [Musa acuminata subsp.
malaccensis]
Length = 401
Score = 54.7 bits (130), Expect = 7e-06
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWRTAAVPLNLPPQTPILMIPYNDPPATASAISFPST 252
+L ++ KL + DYI F SVC SWR+AA P NL PQ P+LM+PY+ P T A SF S
Sbjct: 17 LLHLVAAKLVRISDYIRFRSVCKSWRSAATPANLRPQPPLLMLPYH--PFT-HARSFFSL 73
Query: 251 TAG 243
+ G
Sbjct: 74 STG 76
>ref|XP_019255895.1| PREDICTED: F-box protein SKIP23-like [Nicotiana attenuata]
Length = 456
Score = 40.8 bits (94), Expect(2) = 9e-06
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
+L I KL L DY+ F +VC +WR T A P NLP Q P LM+P N
Sbjct: 76 LLDTIVNKLVNLRDYLRFRAVCSNWRSSTPATPKNLPCQFPWLMLPKN 123
Score = 36.2 bits (82), Expect(2) = 9e-06
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 285 RHRIRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R R FF+L + +L L+LPEA + R + S L+++ PSIF+ NP T
Sbjct: 124 RSNRRGFFNLLDNKLHFLNLPEASNRR----RRCGSSHGWLIIVDESPSIFIINPLT 176
>gb|OIS97053.1| f-box protein skip23 [Nicotiana attenuata]
Length = 394
Score = 40.8 bits (94), Expect(2) = 9e-06
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = -1
Query: 428 ILRRISLKLTGL-DYISFLSVCPSWR--TAAVPLNLPPQTPILMIPYN 294
+L I KL L DY+ F +VC +WR T A P NLP Q P LM+P N
Sbjct: 14 LLDTIVNKLVNLRDYLRFRAVCSNWRSSTPATPKNLPCQFPWLMLPKN 61
Score = 36.2 bits (82), Expect(2) = 9e-06
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 285 RHRIRDFFSLDNRRLSILSLPEALDTRCVQPQALDSQPARLLVLPTHPSIFLFNPFT 115
R R FF+L + +L L+LPEA + R + S L+++ PSIF+ NP T
Sbjct: 62 RSNRRGFFNLLDNKLHFLNLPEASNRR----RRCGSSHGWLIIVDESPSIFIINPLT 114