BLASTX nr result

ID: Ophiopogon24_contig00027821 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00027821
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246771.1| poly(A)-specific ribonuclease PARN-like [Asp...    59   8e-07
gb|PNT68193.1| hypothetical protein BRADI_3g36960v3 [Brachypodiu...    58   1e-06
ref|XP_003572239.1| PREDICTED: poly(A)-specific ribonuclease PAR...    58   1e-06
dbj|BAF23816.1| Os08g0440200 [Oryza sativa Japonica Group] >gi|9...    55   9e-06

>ref|XP_020246771.1| poly(A)-specific ribonuclease PARN-like [Asparagus officinalis]
 gb|ONK58381.1| uncharacterized protein A4U43_C09F11670 [Asparagus officinalis]
          Length = 606

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +3

Query: 3   DGSLVNSLRKLILGDEHYGSRPCTSIDVCSDR 98
           DGSLV SLRKLILGDE YGSRPC +I+VCSDR
Sbjct: 207 DGSLVKSLRKLILGDELYGSRPCMNIEVCSDR 238


>gb|PNT68193.1| hypothetical protein BRADI_3g36960v3 [Brachypodium distachyon]
          Length = 489

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   DGSLVNSLRKLILGDEHYGSRPCTSIDVCSDR 98
           DGSLVNSLRKLILG E YGSRP  SIDVCSDR
Sbjct: 90  DGSLVNSLRKLILGGESYGSRPSMSIDVCSDR 121


>ref|XP_003572239.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Brachypodium
           distachyon]
 gb|KQJ98438.1| hypothetical protein BRADI_3g36960v3 [Brachypodium distachyon]
          Length = 596

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   DGSLVNSLRKLILGDEHYGSRPCTSIDVCSDR 98
           DGSLVNSLRKLILG E YGSRP  SIDVCSDR
Sbjct: 197 DGSLVNSLRKLILGGESYGSRPSMSIDVCSDR 228


>dbj|BAF23816.1| Os08g0440200 [Oryza sativa Japonica Group]
 dbj|BAT05620.1| Os08g0440200 [Oryza sativa Japonica Group]
          Length = 291

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   DGSLVNSLRKLILGDEHYGSRPCTSIDVCSDR 98
           DGSLVN+LR+LILG E YGSRP  SIDVCSDR
Sbjct: 202 DGSLVNTLRQLILGSESYGSRPSFSIDVCSDR 233


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