BLASTX nr result
ID: Ophiopogon24_contig00027793
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027793
(477 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AQK90398.1| hypothetical protein ZEAMMB73_Zm00001d008663 [Zea... 44 6e-08
gb|AQK64650.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 6e-08
gb|AQK92256.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 44 8e-08
ref|XP_019106806.1| PREDICTED: uncharacterized protein LOC104901... 40 2e-07
gb|PKU79361.1| integrator complex subunit 11 [Dendrobium catenatum] 43 6e-07
gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum] 42 1e-06
gb|PHT41664.1| hypothetical protein CQW23_20518 [Capsicum baccatum] 43 1e-06
emb|CCH50976.1| T4.15 [Malus x robusta] 43 2e-06
ref|XP_016576263.1| PREDICTED: uncharacterized protein LOC107873... 42 2e-06
ref|XP_021738213.1| uncharacterized protein LOC110704711 [Chenop... 41 2e-06
gb|PKU80435.1| integrator complex subunit 11 [Dendrobium catenatum] 43 2e-06
ref|XP_015159724.1| PREDICTED: uncharacterized protein LOC107058... 43 2e-06
gb|PKU74657.1| integrator complex subunit 11 [Dendrobium catenatum] 41 3e-06
gb|AQK62700.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 43 3e-06
gb|AQK58252.1| hypothetical protein ZEAMMB73_Zm00001d052860 [Zea... 44 5e-06
ref|XP_019236372.1| PREDICTED: RNA-directed DNA polymerase from ... 42 5e-06
gb|AQK80325.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 40 6e-06
ref|XP_016508544.1| PREDICTED: uncharacterized protein LOC107826... 42 8e-06
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 41 9e-06
>gb|AQK90398.1| hypothetical protein ZEAMMB73_Zm00001d008663 [Zea mays]
Length = 412
Score = 43.5 bits (101), Expect(3) = 6e-08
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
+M D WR TL+ I+KNKGDVQSC++YR
Sbjct: 34 RMPDEWRRSTLVPIFKNKGDVQSCTNYR 61
Score = 36.2 bits (82), Expect(3) = 6e-08
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LRK V +NQF
Sbjct: 66 MSHTMKLWERVIEHRLRKTTSVTQNQF 92
Score = 23.9 bits (50), Expect(3) = 6e-08
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 229 ITIENSMCLGNMGFVWLT 282
I IE CLG++ VWLT
Sbjct: 6 IPIEVWRCLGDIAIVWLT 23
>gb|AQK64650.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 365
Score = 43.9 bits (102), Expect(3) = 6e-08
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 309 AIKMID*WRIDTLISIYKNKGDVQSCSSYR 398
A +M D WR TL+ I+KNKGDVQSC++YR
Sbjct: 32 ANRMPDEWRRSTLVPIFKNKGDVQSCTNYR 61
Score = 35.8 bits (81), Expect(3) = 6e-08
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LRK V +NQF
Sbjct: 66 MSHTMKLWERVIEHRLRKMTSVTQNQF 92
Score = 23.9 bits (50), Expect(3) = 6e-08
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 229 ITIENSMCLGNMGFVWLT 282
I IE CLG++ VWLT
Sbjct: 6 IPIEVWRCLGDIAIVWLT 23
>gb|AQK92256.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 476
Score = 43.5 bits (101), Expect(3) = 8e-08
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
+M D WR TL+ I+KNKGDVQSC++YR
Sbjct: 40 RMPDEWRRSTLVPIFKNKGDVQSCTNYR 67
Score = 35.8 bits (81), Expect(3) = 8e-08
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LRK V +NQF
Sbjct: 72 MSHTMKLWERVIEHRLRKMTSVTQNQF 98
Score = 23.9 bits (50), Expect(3) = 8e-08
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 229 ITIENSMCLGNMGFVWLT 282
I IE CLG++ VWLT
Sbjct: 12 IPIEVWRCLGDIAIVWLT 29
>ref|XP_019106806.1| PREDICTED: uncharacterized protein LOC104901309 [Beta vulgaris
subsp. vulgaris]
Length = 596
Score = 40.0 bits (92), Expect(3) = 2e-07
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIEQ LRK + + ENQF
Sbjct: 400 MSHTMKLWERVIEQRLRKHVKISENQF 426
Score = 38.9 bits (89), Expect(3) = 2e-07
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 330 WRIDTLISIYKNKGDVQSCSSYR 398
WR TLI +YKNKG+VQ C++YR
Sbjct: 373 WRKSTLIPLYKNKGNVQDCTNYR 395
Score = 22.7 bits (47), Expect(3) = 2e-07
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 229 ITIENSMCLGNMGFVWLT 282
I IE CLG G WLT
Sbjct: 340 IPIEVWRCLGGRGIEWLT 357
>gb|PKU79361.1| integrator complex subunit 11 [Dendrobium catenatum]
Length = 477
Score = 43.1 bits (100), Expect(3) = 6e-07
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM D WR+ LI I+KNKGDVQ C++YR
Sbjct: 40 KMPDEWRMSVLIPIFKNKGDVQDCANYR 67
Score = 31.2 bits (69), Expect(3) = 6e-07
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+ +T+K WERV+E LR++ V +NQF
Sbjct: 72 MCHTLKLWERVMEHRLRRDTNVSQNQF 98
Score = 25.8 bits (55), Expect(3) = 6e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 223 NDITIENSMCLGNMGFVWLT 282
+DI IE CLG+ G WLT
Sbjct: 10 DDIPIEAWKCLGDEGISWLT 29
>gb|PKU64612.1| integrator complex subunit 11 [Dendrobium catenatum]
Length = 477
Score = 41.6 bits (96), Expect(3) = 1e-06
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM D WR+ LI I+KNKGD Q C++YR
Sbjct: 40 KMPDEWRMSVLIPIFKNKGDAQDCTNYR 67
Score = 32.3 bits (72), Expect(3) = 1e-06
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+ +T+K WERVIE LR++ V +NQF
Sbjct: 72 MCHTLKLWERVIEHRLRRDTNVSQNQF 98
Score = 25.4 bits (54), Expect(3) = 1e-06
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 223 NDITIENSMCLGNMGFVWLT 282
+DI IE CLG+ G WLT
Sbjct: 10 DDIPIEVWKCLGDEGISWLT 29
>gb|PHT41664.1| hypothetical protein CQW23_20518 [Capsicum baccatum]
Length = 1388
Score = 43.1 bits (100), Expect(2) = 1e-06
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM + WR T+I +YKNKGD+QSC++YR
Sbjct: 1119 KMPETWRWSTMIPLYKNKGDIQSCNNYR 1146
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQFD 475
LS++MK WERV+E LR+++ + ENQF+
Sbjct: 1151 LSHSMKIWERVVEVRLRRKVSISENQFE 1178
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM + WR TL+ IYKNKGDVQ+C +YR
Sbjct: 611 KMPNEWRTSTLVPIYKNKGDVQNCMNYR 638
Score = 36.2 bits (82), Expect(2) = 2e-06
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LR+E V +NQF
Sbjct: 643 MSHTMKLWERVIEHRLRQETRVSDNQF 669
>ref|XP_016576263.1| PREDICTED: uncharacterized protein LOC107873842 [Capsicum annuum]
Length = 315
Score = 41.6 bits (96), Expect(2) = 2e-06
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +3
Query: 330 WRIDTLISIYKNKGDVQSCSSYR 398
WR +T+I +YKNKGD+QSC++YR
Sbjct: 5 WRWNTMIPLYKNKGDIQSCNNYR 27
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
L++T+K WERV+E+ LRK + +LENQF
Sbjct: 32 LNHTIKIWERVVEKRLRKIVSILENQF 58
>ref|XP_021738213.1| uncharacterized protein LOC110704711 [Chenopodium quinoa]
Length = 401
Score = 40.8 bits (94), Expect(3) = 2e-06
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 330 WRIDTLISIYKNKGDVQSCSSYR 398
WR TL+ +YKNKGD Q CS+YR
Sbjct: 336 WRKSTLVQVYKNKGDAQDCSNYR 358
Score = 33.9 bits (76), Expect(3) = 2e-06
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LR +L+NQF
Sbjct: 363 MSHTMKLWERVIEHRLRACTRILDNQF 389
Score = 23.5 bits (49), Expect(3) = 2e-06
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 250 CLGNMGFVWLT 282
CLGN+G WLT
Sbjct: 310 CLGNIGIDWLT 320
>gb|PKU80435.1| integrator complex subunit 11 [Dendrobium catenatum]
Length = 394
Score = 43.1 bits (100), Expect(3) = 2e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM D WR+ LI I+KNKGDVQ C++YR
Sbjct: 87 KMPDEWRMSVLIPIFKNKGDVQDCANYR 114
Score = 29.6 bits (65), Expect(3) = 2e-06
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+ +T+K WERV+E LR + V +NQF
Sbjct: 119 MCHTLKLWERVLEHRLRCDTNVSQNQF 145
Score = 25.4 bits (54), Expect(3) = 2e-06
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 223 NDITIENSMCLGNMGFVWLT 282
+DI IE CLG+ G WLT
Sbjct: 57 DDIPIEVWKCLGDEGISWLT 76
>ref|XP_015159724.1| PREDICTED: uncharacterized protein LOC107058478 [Solanum tuberosum]
Length = 448
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM D WR T++ +YKNKGD+Q+C++YR
Sbjct: 210 KMPDEWRWSTMVPLYKNKGDIQNCNNYR 237
Score = 35.8 bits (81), Expect(2) = 2e-06
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
LS+TMK WERV+E +R+ + + ENQF
Sbjct: 242 LSHTMKIWERVVEMRVRRGVSISENQF 268
>gb|PKU74657.1| integrator complex subunit 11 [Dendrobium catenatum]
Length = 447
Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM D WR+ LI I+KNKGD Q C++YR
Sbjct: 40 KMPDEWRMSMLIPIFKNKGDAQDCANYR 67
Score = 31.2 bits (69), Expect(3) = 3e-06
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+ +T+K WERV+E LR++ V +NQF
Sbjct: 72 MCHTLKLWERVMEHRLRRDTNVSQNQF 98
Score = 25.4 bits (54), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 223 NDITIENSMCLGNMGFVWLT 282
+DI IE CLG+ G WLT
Sbjct: 10 DDIPIEVWKCLGDEGISWLT 29
>gb|AQK62700.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 436
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 318 MID*WRIDTLISIYKNKGDVQSCSSYR 398
M D WR TL+ I+KNKGDVQSC++YR
Sbjct: 1 MPDEWRRSTLVPIFKNKGDVQSCTNYR 27
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LRK V +NQF
Sbjct: 32 MSHTMKLWERVIEHRLRKMTSVTQNQF 58
>gb|AQK58252.1| hypothetical protein ZEAMMB73_Zm00001d052860 [Zea mays]
Length = 219
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
+M D WR TL+ I+KNKGDVQSC++YR
Sbjct: 181 RMPDEWRRSTLVPIFKNKGDVQSCTNYR 208
Score = 29.6 bits (65), Expect(3) = 5e-06
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 2 ECIKSEYQSALVKDDEIKNDGEVIFINCL*KSH*A*I*TK*FKMVRNYR-YCQKN*ASEI 178
+CIK E LVK++EIKN E F + + N R + ++ E+
Sbjct: 76 KCIKDEANQLLVKNEEIKNKWEEYFNKLFNGGNESSTIELDEPFDDNNRGFVRRIQEYEV 135
Query: 179 KDAIKKMEIGSAV 217
K+A+K+M++G A+
Sbjct: 136 KEALKRMKVGKAM 148
Score = 23.9 bits (50), Expect(3) = 5e-06
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 229 ITIENSMCLGNMGFVWLT 282
I IE CLG++ VWLT
Sbjct: 153 IPIEVWRCLGDIAIVWLT 170
>ref|XP_019236372.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like, partial [Nicotiana attenuata]
Length = 635
Score = 42.4 bits (98), Expect(2) = 5e-06
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
+M D WR T++ +YKNKGD+Q+C++YR
Sbjct: 239 RMPDEWRWSTMVPVYKNKGDIQNCNNYR 266
Score = 35.4 bits (80), Expect(2) = 5e-06
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
LS+TMK WE+V+E +R+ + + ENQF
Sbjct: 271 LSHTMKVWEKVVEMRIRRAVSISENQF 297
>gb|AQK80325.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
Length = 442
Score = 39.7 bits (91), Expect(3) = 6e-06
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
+M D WR TL+ I+KNKGD+QSC++YR
Sbjct: 187 RMPDEWR-STLVPIFKNKGDIQSCTNYR 213
Score = 32.7 bits (73), Expect(3) = 6e-06
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LR ++ NQF
Sbjct: 218 MSHTMKLWERVIEHRLRGMTHIIMNQF 244
Score = 24.3 bits (51), Expect(3) = 6e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 220 SNDITIENSMCLGNMGFVWLT 282
++ I IE CLG++ VWLT
Sbjct: 156 TDGIPIEVWKCLGDIAIVWLT 176
>ref|XP_016508544.1| PREDICTED: uncharacterized protein LOC107826111 [Nicotiana tabacum]
Length = 374
Score = 42.4 bits (98), Expect(3) = 8e-06
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 318 MID*WRIDTLISIYKNKGDVQSCSSYR 398
M+D WR T++ +YKN GD+QSC++YR
Sbjct: 192 MLDEWRWSTMVPLYKNNGDIQSCNNYR 218
Score = 31.6 bits (70), Expect(3) = 8e-06
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
LS+ MK WERV+E + +FV +N+F
Sbjct: 223 LSHAMKVWERVVEARVNMTVFVSDNKF 249
Score = 22.3 bits (46), Expect(3) = 8e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 223 NDITIENSMCLGNMGFVWLT 282
++I +E C+G G WLT
Sbjct: 161 DEIPVEFWKCVGRAGLKWLT 180
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 40.8 bits (94), Expect(2) = 9e-06
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +3
Query: 315 KMID*WRIDTLISIYKNKGDVQSCSSYR 398
KM + WR L+ IYKNKGDVQ+C +YR
Sbjct: 215 KMPNEWRTSPLVPIYKNKGDVQNCMNYR 242
Score = 36.2 bits (82), Expect(2) = 9e-06
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 392 LSYTMKHWERVIEQ*LRKEIFVLENQF 472
+S+TMK WERVIE LR+E V +NQF
Sbjct: 247 MSHTMKLWERVIEHRLRQETRVSDNQF 273