BLASTX nr result
ID: Ophiopogon24_contig00027635
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027635
(450 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 111 1e-25
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 110 3e-25
ref|YP_008992354.1| hypothetical protein Salmi_Mp138 (mitochondr... 88 1e-19
emb|CDM82313.1| unnamed protein product [Triticum aestivum] 69 4e-19
emb|CDM81530.1| unnamed protein product [Triticum aestivum] 65 4e-17
gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba] 78 7e-16
gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [... 70 5e-14
emb|CDM87129.1| unnamed protein product [Triticum aestivum] 63 3e-12
emb|CDY45481.1| BnaCnng12400D [Brassica napus] 55 1e-09
emb|CDY67690.1| BnaUnng02370D [Brassica napus] 51 3e-08
gb|EMS53418.1| hypothetical protein TRIUR3_10557 [Triticum urartu] 60 2e-07
ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago... 56 2e-07
gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum] 57 6e-07
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 111 bits (278), Expect = 1e-25
Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Frame = +1
Query: 1 AQ*RKVNVRDAFHLYESRTYHARPDVEPKYELADRAGRRCQILKVESRSA*CTNY----V 168
AQ RKV VRDAFHLYESRTY + ++ AG R L + T Y
Sbjct: 2825 AQLRKVYVRDAFHLYESRTYPTGRSAKIHWQTESGAGARSLKLSLYQPCVPTTWYDGHSK 2884
Query: 169 VRRALKDLANDGSLHLRALMLYGNGGLETILMILISGKNNQNQSPGWLVSLVIGDYLAWF 348
R + H+ L G +++ +N SPGWLVSLVIGDYLAWF
Sbjct: 2885 TWRMRAHPTQERLCHMGTL-----GWKQSLWFSYPVSIIRKNLSPGWLVSLVIGDYLAWF 2939
Query: 349 GEHLLG*RFVFCKMLRPKC*TIDSTCSDGCLPQS 450
GEHLLG R VFC ML P C TI TCSDGC PQS
Sbjct: 2940 GEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSPQS 2973
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 110 bits (276), Expect = 3e-25
Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Frame = +1
Query: 1 AQ*RKVNVRDAFHLYESRTYHARPDVEPKYELADRAGRRCQILKVESRSA*CTNY----V 168
AQ RKV VRDAFHLYESRTY + ++ AG R L + T Y
Sbjct: 2825 AQLRKVYVRDAFHLYESRTYPTGRSAKIHWQTESGAGARSLKLSLYQPCVPTTWYDGHSK 2884
Query: 169 VRRALKDLANDGSLHLRALMLYGNGGLETILMILISGKNNQNQSPGWLVSLVIGDYLAWF 348
R + H+ L G +++ +N SPGWLVSLVIGDYLAWF
Sbjct: 2885 TWRMRAHPTQERLCHMGTL-----GWKQSLWFSYPVTIIRKNLSPGWLVSLVIGDYLAWF 2939
Query: 349 GEHLLG*RFVFCKMLRPKC*TIDSTCSDGCLPQS 450
GEHLLG R VFC ML P C TI TCSDGC PQS
Sbjct: 2940 GEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSPQS 2973
>ref|YP_008992354.1| hypothetical protein Salmi_Mp138 (mitochondrion) [Salvia
miltiorrhiza]
gb|AGU16672.1| hypothetical protein Salmi_Mp138 (mitochondrion) [Salvia
miltiorrhiza]
Length = 111
Score = 87.8 bits (216), Expect = 1e-19
Identities = 43/58 (74%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 143 DQPSAPTTWYDGHSKTWRMMAHSI*ERLCYMGTEGWKQSL*F-*YPVRIIRIKVQVGW 313
DQPSAPTTWYDGHSKTWRMMAHS ERLCY GT GWKQ L F R + KVQVGW
Sbjct: 54 DQPSAPTTWYDGHSKTWRMMAHSTQERLCYRGTHGWKQPLWFVLISGRNNKKKVQVGW 111
Score = 59.7 bits (143), Expect = 1e-08
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Frame = +1
Query: 4 Q*RKVNVRDAFHLYESRTYHARPDVEPKYELADRAGR--RCQILKVESR-----SA*CTN 162
Q RKV VRDAFHLYESRTYHARPDVEP RAGR R Q+ +SR SA T
Sbjct: 8 QKRKVIVRDAFHLYESRTYHARPDVEPL-----RAGRPGRAQVPDPKSRVSDQPSAPTTW 62
Query: 163 YVVR-RALKDLANDGSLHLRALMLYGNGGLETILMILISGKNNQNQ-SPGW 309
Y + + +A+ S R +G + + +LISG+NN+ + GW
Sbjct: 63 YDGHSKTWRMMAH--STQERLCYRGTHGWKQPLWFVLISGRNNKKKVQVGW 111
>emb|CDM82313.1| unnamed protein product [Triticum aestivum]
Length = 64
Score = 68.9 bits (167), Expect(2) = 4e-19
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 289 QNQSPGWLVSLVIGDYLAWFGEHLLG*RFVFC 384
+NQSPGWLVSLVIGDYLAWFGEHLLG RFVFC
Sbjct: 33 KNQSPGWLVSLVIGDYLAWFGEHLLGFRFVFC 64
Score = 53.5 bits (127), Expect(2) = 4e-19
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = +2
Query: 197 MMAHSI*ERLCYMGTEGWKQSL*F*YPVRIIRIKVQVGW 313
M AH ERLC+MGT GWKQSL F YPVRIIR GW
Sbjct: 1 MRAHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPGW 39
>emb|CDM81530.1| unnamed protein product [Triticum aestivum]
Length = 64
Score = 65.5 bits (158), Expect(2) = 4e-17
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +1
Query: 289 QNQSPGWLVSLVIGDYLAWFGEHLLG*RFVFC 384
+NQSP WLVSLVIGDYLAWFGEHLLG RFVFC
Sbjct: 33 KNQSPCWLVSLVIGDYLAWFGEHLLGFRFVFC 64
Score = 50.1 bits (118), Expect(2) = 4e-17
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +2
Query: 197 MMAHSI*ERLCYMGTEGWKQSL*F*YPVRIIRIKVQVGW 313
M AH ERLC+MGT GWKQSL F YPVRIIR W
Sbjct: 1 MRAHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPCW 39
>gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 106
Score = 78.2 bits (191), Expect = 7e-16
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +1
Query: 238 NGGLETILMILISGKNNQNQSPGWLVSLVIGDYLAWFGEHLLG 366
+G ++ LM+LISG+NNQN+SPGWLVSLVIGDYLAWFGEHLLG
Sbjct: 64 HGWKQSFLMVLISGRNNQNKSPGWLVSLVIGDYLAWFGEHLLG 106
>gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [Eutrema
salsugineum]
Length = 251
Score = 70.5 bits (171), Expect(2) = 5e-14
Identities = 39/68 (57%), Positives = 45/68 (66%)
Frame = +1
Query: 160 NYVVRRALKDLANDGSLHLRALMLYGNGGLETILMILISGKNNQNQSPGWLVSLVIGDYL 339
N+ +R DG + ALM Y N LETILM+LISG+NN+NQSPG LVSLVIGDYL
Sbjct: 153 NHQIRDWAPSQRFDGMAYPIALMSYENSWLETILMVLISGRNNKNQSPGRLVSLVIGDYL 212
Query: 340 AWFGEHLL 363
A LL
Sbjct: 213 ACLNAELL 220
Score = 34.7 bits (78), Expect(2) = 5e-14
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 398 LNAELLTLLVRMGVYPK 448
LNAELLTLLVRMGV+PK
Sbjct: 215 LNAELLTLLVRMGVHPK 231
>emb|CDM87129.1| unnamed protein product [Triticum aestivum]
Length = 52
Score = 62.8 bits (151), Expect(2) = 3e-12
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 289 QNQSPGWLVSLVIGDYLAWFGEHLLG*RFVFC 384
+NQSP WLVSLVIG YLAWFGEHLLG RFVFC
Sbjct: 21 KNQSPCWLVSLVIGHYLAWFGEHLLGFRFVFC 52
Score = 36.6 bits (83), Expect(2) = 3e-12
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +2
Query: 233 MGTEGWKQSL*F*YPVRIIRIKVQVGW 313
MGT GWKQSL F YPVRIIR W
Sbjct: 1 MGTLGWKQSLWFLYPVRIIRKNQSPCW 27
>emb|CDY45481.1| BnaCnng12400D [Brassica napus]
Length = 292
Score = 55.5 bits (132), Expect(2) = 1e-09
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +1
Query: 199 DGSLHLRALMLYGNGGLETILMILISGKNNQNQSPGWL 312
DG H ALM YGN LETILM+LISG+NN+NQSPG L
Sbjct: 68 DGMAHPIALMSYGNSWLETILMVLISGRNNKNQSPGSL 105
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 398 LNAELLTLLVRMGVYPK 448
LNAELLTLLVRMGV+PK
Sbjct: 105 LNAELLTLLVRMGVHPK 121
>emb|CDY67690.1| BnaUnng02370D [Brassica napus]
Length = 354
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 172 RRALKDLANDGSLHLRALMLYGNGGLETILMILISGKNNQNQSPGWL 312
R +L L + +LM YGN LETILM+LISG+NN+NQSPG L
Sbjct: 145 RLSLPQLGESPRNDIVSLMSYGNSWLETILMVLISGRNNKNQSPGSL 191
Score = 34.7 bits (78), Expect(2) = 3e-08
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 398 LNAELLTLLVRMGVYPK 448
LNAELLTLLVRMGV+PK
Sbjct: 191 LNAELLTLLVRMGVHPK 207
>gb|EMS53418.1| hypothetical protein TRIUR3_10557 [Triticum urartu]
Length = 688
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 275 DIKIIRIVSSPPFPYNISALKWSEPSFARSLSARRTT*LV 156
DIK IRIVSS FPY+ISAL W PSFARSLSARRTT L+
Sbjct: 168 DIKTIRIVSSREFPYDISALGWGGPSFARSLSARRTTWLL 207
>ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
gb|KEH16846.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
Length = 334
Score = 56.2 bits (134), Expect(2) = 2e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 292 NQSPGWLVSLVIGDYLAWFGEHLL 363
NQSPGWLVSLVIGDYLAWFGEHLL
Sbjct: 291 NQSPGWLVSLVIGDYLAWFGEHLL 314
Score = 26.2 bits (56), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 201 WLTPFKSAYVIWE 239
W +P KSAYVIWE
Sbjct: 276 WPSPPKSAYVIWE 288
>gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum]
Length = 245
Score = 57.4 bits (137), Expect = 6e-07
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +1
Query: 280 KNNQNQSPGWLVSLVIGDYLAWFGEHLL 363
K+ NQSPGWLVSLVIGDYLAWFGEHLL
Sbjct: 198 KSAYNQSPGWLVSLVIGDYLAWFGEHLL 225