BLASTX nr result
ID: Ophiopogon24_contig00027634
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon24_contig00027634
(438 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 108 2e-24
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 107 3e-24
ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago... 77 4e-22
gb|PPD79524.1| hypothetical protein GOBAR_DD23549 [Gossypium bar... 89 7e-19
gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba] 72 1e-13
gb|OIW15498.1| hypothetical protein TanjilG_32902 [Lupinus angus... 76 2e-13
gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [... 74 5e-13
gb|AFK38641.1| unknown [Medicago truncatula] 69 7e-13
gb|EEF27697.1| conserved hypothetical protein [Ricinus communis] 55 2e-07
gb|KNA04042.1| hypothetical protein SOVF_203350, partial [Spinac... 42 4e-07
gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum] 56 2e-06
gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense] 55 4e-06
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 108 bits (269), Expect = 2e-24
Identities = 64/123 (52%), Positives = 71/123 (57%)
Frame = +3
Query: 69 P*TK*KARPSPPSPISAFHSLFGPPHEK*EASSIRSNYERVGQ*HSSFFPGSPFEGKAFA 248
P K K PPSPI P K IRS YERVGQ H FF +G
Sbjct: 2708 PLNKIKGATIPPSPIFFISFSIWPASSKMIGLLIRSYYERVGQLHCYFFFSFRRKGLRIL 2767
Query: 249 FLIR*GRTALFAPAWRIASPRRPLPFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQIFD 428
+L+ G P + +PR P PFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQ ++
Sbjct: 2768 YLV--GPDGFVCPC--LVNPR-PSPFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQRWN 2822
Query: 429 GMA 437
G A
Sbjct: 2823 GPA 2825
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 107 bits (268), Expect = 3e-24
Identities = 64/123 (52%), Positives = 71/123 (57%)
Frame = +3
Query: 69 P*TK*KARPSPPSPISAFHSLFGPPHEK*EASSIRSNYERVGQ*HSSFFPGSPFEGKAFA 248
P K K PPSPI P K IRS YERVGQ H FF +G
Sbjct: 2708 PLNKIKGATIPPSPIFFISFSIWPASSKMIGLLIRSLYERVGQYHCYFFFSFRRKGLRIL 2767
Query: 249 FLIR*GRTALFAPAWRIASPRRPLPFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQIFD 428
+L+ G P + +PR P PFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQ ++
Sbjct: 2768 YLV--GPDGFVCPC--LVNPR-PSPFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQRWN 2822
Query: 429 GMA 437
G A
Sbjct: 2823 GPA 2825
>ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
gb|KEH16846.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
Length = 334
Score = 77.4 bits (189), Expect(3) = 4e-22
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +1
Query: 316 PYRSREVFATAGKPVYEAKPIATPTIKYEIGPLLKSLMEWP 438
PYRSR VFATAG+ V EAKPIATPTIKYEIGPLLK LMEWP
Sbjct: 237 PYRSRSVFATAGEAVVEAKPIATPTIKYEIGPLLKDLMEWP 277
Score = 40.0 bits (92), Expect(3) = 4e-22
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 206 LFLSRVSFRRKGLRIPNPVG 265
LF+S VSFRRKGLRIPNPVG
Sbjct: 196 LFISPVSFRRKGLRIPNPVG 215
Score = 35.0 bits (79), Expect(3) = 4e-22
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 264 GRTALFAPAWRIASPRRPL 320
GRTALFAPAW IASPR +
Sbjct: 216 GRTALFAPAWLIASPRNDI 234
>gb|PPD79524.1| hypothetical protein GOBAR_DD23549 [Gossypium barbadense]
Length = 216
Score = 88.6 bits (218), Expect = 7e-19
Identities = 51/79 (64%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Frame = +1
Query: 232 KERPSHS*S---GRAGRLCLPQLG-------ESHPRAVPYRSREVFATAGKPVYEAKPIA 381
KERP S S GRAGRLCL QL + + PYRSR VFATAG+ V EAKPIA
Sbjct: 4 KERPIDSKSLRKGRAGRLCLSQLSLANRIPAQRYYLCDPYRSRSVFATAGEAVVEAKPIA 63
Query: 382 TPTIKYEIGPLLKSLMEWP 438
TPTIKYEIG LLK LMEWP
Sbjct: 64 TPTIKYEIGALLKDLMEWP 82
>gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 106
Score = 72.4 bits (176), Expect = 1e-13
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 310 AVPYRSREVFATAGKPVYEAKPIATPTIKYEIGPLLKSLMEWP 438
+ PYRSR VFATAG+ V EAKPIATPTIK EIGPLLK MEWP
Sbjct: 11 SAPYRSRSVFATAGEAVVEAKPIATPTIKDEIGPLLKDFMEWP 53
>gb|OIW15498.1| hypothetical protein TanjilG_32902 [Lupinus angustifolius]
Length = 335
Score = 76.3 bits (186), Expect = 2e-13
Identities = 36/48 (75%), Positives = 38/48 (79%)
Frame = +1
Query: 295 ESHPRAVPYRSREVFATAGKPVYEAKPIATPTIKYEIGPLLKSLMEWP 438
+ H PYRSR VFATAG+ V EAKPIATPTIKYEIG LLK LMEWP
Sbjct: 47 QRHSLCAPYRSRSVFATAGEAVAEAKPIATPTIKYEIGALLKDLMEWP 94
>gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [Eutrema
salsugineum]
Length = 251
Score = 73.9 bits (180), Expect = 5e-13
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +3
Query: 312 RPLPFSRSLCNGWETSLRSEAYCHADHQIRDWAPSQIFDGMA 437
RPLPFS S+CNGW S RSE Y HA+HQIRDWAPSQ FDGMA
Sbjct: 128 RPLPFSLSVCNGWGGSRRSEVYRHANHQIRDWAPSQRFDGMA 169
>gb|AFK38641.1| unknown [Medicago truncatula]
Length = 57
Score = 68.9 bits (167), Expect = 7e-13
Identities = 38/52 (73%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = -1
Query: 249 MRRPFLRKETRERKSYAIDRPFRSYFESTRPLIF---HEAGQIENEMQKWGK 103
MRRPFLRKET E KSYAIDRPFRS FES F EAG+IENEMQK+GK
Sbjct: 1 MRRPFLRKETGEIKSYAIDRPFRSDFESIVLSFFSILFEAGRIENEMQKYGK 52
>gb|EEF27697.1| conserved hypothetical protein [Ricinus communis]
Length = 52
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -2
Query: 245 EGLSFERRPGKERAMLLTDPFVVTSNR 165
EGLSFE+RPGKERAMLLTDPFVVTSN+
Sbjct: 26 EGLSFEKRPGKERAMLLTDPFVVTSNQ 52
>gb|KNA04042.1| hypothetical protein SOVF_203350, partial [Spinacia oleracea]
Length = 55
Score = 42.0 bits (97), Expect(2) = 4e-07
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -3
Query: 340 QRLRENGKGRRGDAIRQAGANKAVRPYRIRNAKAFPS 230
+R R RGDAIRQA KA RPYRI NA AFPS
Sbjct: 21 ERERSRAMSLRGDAIRQA---KAARPYRIGNANAFPS 54
Score = 39.7 bits (91), Expect(2) = 4e-07
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -2
Query: 392 MVGVAIGFAS*TGFPAVAKTSRER 321
MVG AIGFAS T FPAVAKT RER
Sbjct: 1 MVGGAIGFASTTAFPAVAKTERER 24
>gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum]
Length = 245
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1
Query: 352 KPVYEAKPIATPTIKYEIGPLLKSLMEWP 438
+ V EAKPIATPTIKYEIGPLLK LMEWP
Sbjct: 166 RAVVEAKPIATPTIKYEIGPLLKDLMEWP 194
>gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense]
Length = 560
Score = 55.5 bits (132), Expect = 4e-06
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3
Query: 342 NGWETSLRSEAYCHADHQIRDWAPSQIFDGMA 437
NGWE S R+EAY HADHQI DWAPSQ FD MA
Sbjct: 168 NGWEGSHRNEAYRHADHQIGDWAPSQRFDEMA 199