BLASTX nr result

ID: Ophiopogon24_contig00027524 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon24_contig00027524
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010930523.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    67   2e-09
ref|XP_008786450.1| PREDICTED: uncharacterized protein LOC103704...    64   4e-08
ref|XP_020245632.1| uncharacterized protein LOC109823703 [Aspara...    62   8e-08

>ref|XP_010930523.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105051681 [Elaeis guineensis]
          Length = 444

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +1

Query: 418 ILRSHLNSNMQHPKGQ--GWAAFNRKQRGKQGTGTECNVDPYPXXXXXXXXXXANTLINN 591
           I RS LNSNMQ P+ +  GWAAF+RKQR K G   EC+ DP+P          A +L  N
Sbjct: 3   ITRSPLNSNMQQPRVRTPGWAAFDRKQRAKDGNLPECDADPFPSISNITSSGSATSLETN 62

Query: 592 NCGPKWSFSSVVCPSV 639
           N     SFSSVV P V
Sbjct: 63  NSTSMKSFSSVVRPHV 78


>ref|XP_008786450.1| PREDICTED: uncharacterized protein LOC103704789 [Phoenix
           dactylifera]
          Length = 444

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = +1

Query: 418 ILRSHLNSNMQHPKGQ--GWAAFNRKQRGKQGTGTECNVDPYPXXXXXXXXXXANTLINN 591
           I RS LNSNMQ P+ +  GWAAF+RKQR K GT  EC+ DP+P          A  L+ N
Sbjct: 3   ISRSPLNSNMQQPRVRTPGWAAFDRKQRAKDGTLPECDADPFPSISNATSSGSAKNLVTN 62

Query: 592 NCGPKWSFSSVVCPSV 639
           N     S S  V P V
Sbjct: 63  NSTSMRSSSLAVRPYV 78


>ref|XP_020245632.1| uncharacterized protein LOC109823703 [Asparagus officinalis]
 ref|XP_020245634.1| uncharacterized protein LOC109823703 [Asparagus officinalis]
          Length = 397

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 34/66 (51%), Positives = 38/66 (57%)
 Frame = +1

Query: 445 MQHPKGQGWAAFNRKQRGKQGTGTECNVDPYPXXXXXXXXXXANTLINNNCGPKWSFSSV 624
           MQ P+GQGWA F+RKQR KQGTGTE NVDPYP             L  N    K  FSS+
Sbjct: 1   MQRPRGQGWADFDRKQRHKQGTGTEYNVDPYPSISETTSNAARPFLKTNYVSIK-PFSSI 59

Query: 625 VCPSVG 642
           + P  G
Sbjct: 60  IHPYSG 65


Top